RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 TTC9BQ8N6N2 239 aa8.66□□□□□ -1.02
VPS8-225ENST00000492449 NUP43Q8NFH3 380 aa8.66□□□□□ -1.02
VPS8-225ENST00000492449 OR51L1Q8NGJ5 315 aa8.66□□□□□ -1.02
VPS8-225ENST00000492449 TMEM18Q96B42 140 aa8.66□□□□□ -1.02
VPS8-225ENST00000492449 SLC35A4Q96G79 324 aa8.66□□□□□ -1.02
VPS8-225ENST00000492449 RARRES2Q99969 163 aa8.66□□□□□ -1.02
VPS8-225ENST00000492449 NIPSNAP3BQ9BS92 247 aa8.66□□□□□ -1.02
VPS8-225ENST00000492449 RXFP3Q9NSD7 469 aa8.66□□□□□ -1.02
VPS8-225ENST00000492449 PADI1Q9ULC6 663 aa8.66□□□□□ -1.02
VPS8-225ENST00000492449 ANAPC10Q9UM13 185 aa8.66□□□□□ -1.02
VPS8-225ENST00000492449 A0A087WV62 115 aa8.65□□□□□ -1.02
VPS8-225ENST00000492449 OR2AG2A6NM03 316 aa8.65□□□□□ -1.02
VPS8-225ENST00000492449 NDUFB2O95178 105 aa8.65□□□□□ -1.02
VPS8-225ENST00000492449 GDI1P31150 447 aa8.65□□□□□ -1.02
VPS8-225ENST00000492449 HRH1P35367 487 aa8.65□□□□□ -1.02
VPS8-225ENST00000492449 APOBEC1P41238 236 aaKnown RBP8.65□□□□□ -1.02
VPS8-225ENST00000492449 GATMP50440 423 aa8.65□□□□□ -1.02
VPS8-225ENST00000492449 KLF3P57682 345 aaPredicted RBP8.65□□□□□ -1.02
VPS8-225ENST00000492449 SUPT4H1P63272 117 aaKnown RBP8.65□□□□□ -1.02
VPS8-225ENST00000492449 MAP2K5Q13163 448 aa8.65□□□□□ -1.02
VPS8-225ENST00000492449 SHHQ15465 462 aa8.65□□□□□ -1.02
VPS8-225ENST00000492449 ANKRD55Q3KP44 614 aa8.65□□□□□ -1.02
VPS8-225ENST00000492449 ARHGAP11BQ3KRB8 267 aa8.65□□□□□ -1.02
VPS8-225ENST00000492449 FBXO46Q6PJ61 603 aaPredicted RBP8.65□□□□□ -1.02
VPS8-225ENST00000492449 KIRREL2Q6UWL6 708 aa8.65□□□□□ -1.02
VPS8-225ENST00000492449 NUFIP2Q7Z417 695 aaKnown RBP8.65□□□□□ -1.02
VPS8-225ENST00000492449 TRAPPC6BQ86SZ2 158 aa8.65□□□□□ -1.02
VPS8-225ENST00000492449 FAM160A2Q8N612 972 aaPredicted RBP8.65□□□□□ -1.02
VPS8-225ENST00000492449 NKAIN3Q8N8D7 197 aa8.65□□□□□ -1.02
VPS8-225ENST00000492449 APCDD1LQ8NCL9 501 aa8.65□□□□□ -1.02
VPS8-225ENST00000492449 TMEM104Q8NE00 496 aa8.65□□□□□ -1.02
VPS8-225ENST00000492449 MARCH1Q8TCQ1 289 aa8.65□□□□□ -1.02
VPS8-225ENST00000492449 ZNF689Q96CS4 500 aaPredicted RBP8.65□□□□□ -1.02
VPS8-225ENST00000492449 THOC3Q96J01 351 aaKnown RBP8.65□□□□□ -1.02
VPS8-225ENST00000492449 DCBLD2Q96PD2 775 aa8.65□□□□□ -1.02
VPS8-225ENST00000492449 NUDT16L1Q9BRJ7 211 aaKnown RBP8.65□□□□□ -1.02
VPS8-225ENST00000492449 NUDT9Q9BW91 350 aa8.65□□□□□ -1.02
VPS8-225ENST00000492449 PARP12Q9H0J9 701 aaKnown RBP8.65□□□□□ -1.02
VPS8-225ENST00000492449 HIPK2Q9H2X6 1198 aa8.65□□□□□ -1.02
VPS8-225ENST00000492449 C5orf66Q9H5L9 145 aa8.65□□□□□ -1.02
VPS8-225ENST00000492449 CREBZFQ9NS37 354 aa8.65□□□□□ -1.02
VPS8-225ENST00000492449 AURKAIP1Q9NWT8 199 aaPredicted RBP8.65□□□□□ -1.02
VPS8-225ENST00000492449 YIPF1Q9Y548 306 aa8.65□□□□□ -1.02
VPS8-225ENST00000492449 H0YL77 283 aa8.65□□□□□ -1.02
VPS8-225ENST00000492449 CLDN34H7C241 214 aa8.65□□□□□ -1.02
VPS8-225ENST00000492449 STC2O76061 302 aa8.65□□□□□ -1.02
VPS8-225ENST00000492449 KAT7O95251 611 aa8.65□□□□□ -1.02
VPS8-225ENST00000492449 OPN1MWP04001 364 aa8.65□□□□□ -1.02
VPS8-225ENST00000492449 OPN1MW2P0DN77 364 aa8.65□□□□□ -1.02
VPS8-225ENST00000492449 OPN1MW3P0DN78 364 aa8.65□□□□□ -1.02
VPS8-225ENST00000492449 SELEP16581 610 aa8.65□□□□□ -1.02
VPS8-225ENST00000492449 FSTP19883 344 aa8.65□□□□□ -1.02
VPS8-225ENST00000492449 PPP1CCP36873 323 aaKnown RBP8.65□□□□□ -1.02
VPS8-225ENST00000492449 TNFSF10P50591 281 aa8.65□□□□□ -1.02
VPS8-225ENST00000492449 COL5A1-AS1Q5SY13 56 aa8.65□□□□□ -1.02
VPS8-225ENST00000492449 ASPHD2Q6ICH7 369 aa8.65□□□□□ -1.02
VPS8-225ENST00000492449 SSX7Q7RTT5 188 aa8.65□□□□□ -1.02
VPS8-225ENST00000492449 SMIM15Q7Z3B0 74 aa8.65□□□□□ -1.02
VPS8-225ENST00000492449 ZNF467Q7Z7K2 595 aaPredicted RBP8.65□□□□□ -1.02
VPS8-225ENST00000492449 OR10AC1Q8NH08 325 aa8.65□□□□□ -1.02
VPS8-225ENST00000492449 NKX3-1Q99801 234 aaPredicted RBP8.65□□□□□ -1.02
VPS8-225ENST00000492449 PRRX2Q99811 253 aa8.65□□□□□ -1.02
VPS8-225ENST00000492449 MIEN1Q9BRT3 115 aa8.65□□□□□ -1.02
VPS8-225ENST00000492449 KIAA1456Q9P272 454 aa8.65□□□□□ -1.02
VPS8-225ENST00000492449 SRPK3Q9UPE1 567 aa8.65□□□□□ -1.02
VPS8-225ENST00000492449 ENTPD2Q9Y5L3 495 aa8.65□□□□□ -1.02
VPS8-225ENST00000492449 WIPF3A6NGB9 483 aa8.64□□□□□ -1.03
VPS8-225ENST00000492449 ARPC3O15145 178 aa8.64□□□□□ -1.03
VPS8-225ENST00000492449 PLRG1O43660 514 aaKnown RBP8.64□□□□□ -1.03
VPS8-225ENST00000492449 RPP14O95059 124 aaKnown RBP8.64□□□□□ -1.03
VPS8-225ENST00000492449 UMODP07911 640 aa8.64□□□□□ -1.03
VPS8-225ENST00000492449 CTSAP10619 480 aa8.64□□□□□ -1.03
VPS8-225ENST00000492449 IGFBP3P17936 291 aaPredicted RBP8.64□□□□□ -1.03
VPS8-225ENST00000492449 OR10J1P30954 320 aa8.64□□□□□ -1.03
VPS8-225ENST00000492449 RPL29P47914 159 aaKnown RBP8.64□□□□□ -1.03
VPS8-225ENST00000492449 POLR2HP52434 150 aaKnown RBP8.64□□□□□ -1.03
VPS8-225ENST00000492449 REEP5Q00765 189 aa8.64□□□□□ -1.03
VPS8-225ENST00000492449 DUSP2Q05923 314 aa8.64□□□□□ -1.03
VPS8-225ENST00000492449 PNRC1Q12796 327 aaPredicted RBP8.64□□□□□ -1.03
VPS8-225ENST00000492449 C4orf17Q53FE4 359 aa8.64□□□□□ -1.03
VPS8-225ENST00000492449 ZNF506Q5JVG8 444 aa8.64□□□□□ -1.03
VPS8-225ENST00000492449 CDC20BQ86Y33 519 aa8.64□□□□□ -1.03
VPS8-225ENST00000492449 GCNT2Q8N0V5 402 aa8.64□□□□□ -1.03
VPS8-225ENST00000492449 ZNF676Q8N7Q3 588 aa8.64□□□□□ -1.03
VPS8-225ENST00000492449 OR51A4Q8NGJ6 313 aa8.64□□□□□ -1.03
VPS8-225ENST00000492449 RHBDD1Q8TEB9 315 aa8.64□□□□□ -1.03
VPS8-225ENST00000492449 EXTL1Q92935 676 aa8.64□□□□□ -1.03
VPS8-225ENST00000492449 CNRIP1Q96F85 164 aaPredicted RBP8.64□□□□□ -1.03
VPS8-225ENST00000492449 PYGO2Q9BRQ0 406 aa8.64□□□□□ -1.03
VPS8-225ENST00000492449 OR2J1Q9GZK6 312 aa8.64□□□□□ -1.03
VPS8-225ENST00000492449 SLC25A13Q9UJS0 675 aa8.64□□□□□ -1.03
VPS8-225ENST00000492449 HEATR5AQ86XA9 2040 aa8.64□□□□□ -1.03
VPS8-225ENST00000492449 A0A0U1RQV5 110 aa8.64□□□□□ -1.03
VPS8-225ENST00000492449 FIGNL2A6NMB9 653 aa8.64□□□□□ -1.03
VPS8-225ENST00000492449 LDB3O75112 727 aa8.64□□□□□ -1.03
VPS8-225ENST00000492449 CYB5R3P00387 301 aaPredicted RBP8.64□□□□□ -1.03
VPS8-225ENST00000492449 OPN1LWP04000 364 aa8.64□□□□□ -1.03
VPS8-225ENST00000492449 FUT3P21217 361 aa8.64□□□□□ -1.03
VPS8-225ENST00000492449 FHITP49789 147 aa8.64□□□□□ -1.03
VPS8-225ENST00000492449 S100A10P60903 97 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms