RNA–Protein interactions for RNA: ENST00000491916.1

SS18L1-204, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18L1, Length 456 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-204ENST00000491916 SELEP16581 610 aa12.84□□□□□ -0.35
SS18L1-204ENST00000491916 IL2RGP31785 369 aa12.84□□□□□ -0.35
SS18L1-204ENST00000491916 TMEM33P57088 247 aa12.84□□□□□ -0.35
SS18L1-204ENST00000491916 ADARB1P78563 741 aaKnown RBP12.84□□□□□ -0.35
SS18L1-204ENST00000491916 TNFAIP6P98066 277 aaPredicted RBP12.84□□□□□ -0.35
SS18L1-204ENST00000491916 ZNF85Q03923 595 aa12.84□□□□□ -0.35
SS18L1-204ENST00000491916 MFGE8Q08431 387 aaPredicted RBP12.84□□□□□ -0.35
SS18L1-204ENST00000491916 MAB21L1Q13394 359 aa12.84□□□□□ -0.35
SS18L1-204ENST00000491916 TMEM249Q2WGJ8 235 aa12.84□□□□□ -0.35
SS18L1-204ENST00000491916 ZMAT1Q5H9K5 638 aa12.84□□□□□ -0.35
SS18L1-204ENST00000491916 ZNF322Q6U7Q0 402 aaPredicted RBP12.84□□□□□ -0.35
SS18L1-204ENST00000491916 CLEC9AQ6UXN8 241 aa12.84□□□□□ -0.35
SS18L1-204ENST00000491916 Q71RC1 249 aaPredicted RBP12.84□□□□□ -0.35
SS18L1-204ENST00000491916 MRPL21Q7Z2W9 205 aaKnown RBP12.84□□□□□ -0.35
SS18L1-204ENST00000491916 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.84□□□□□ -0.35
SS18L1-204ENST00000491916 PACRGLQ8N7B6 248 aa12.84□□□□□ -0.35
SS18L1-204ENST00000491916 OR10AD1Q8NGE0 317 aa12.84□□□□□ -0.35
SS18L1-204ENST00000491916 OR56B2PQ8NGI1 322 aa12.84□□□□□ -0.35
SS18L1-204ENST00000491916 OR52H1Q8NGJ2 320 aa12.84□□□□□ -0.35
SS18L1-204ENST00000491916 OR13G1Q8NGZ3 307 aa12.84□□□□□ -0.35
SS18L1-204ENST00000491916 ITLN1Q8WWA0 313 aa12.84□□□□□ -0.35
SS18L1-204ENST00000491916 PPP1R3EQ9H7J1 279 aa12.84□□□□□ -0.35
SS18L1-204ENST00000491916 DCLRE1BQ9H816 532 aa12.84□□□□□ -0.35
SS18L1-204ENST00000491916 NIPAL2Q9H841 368 aa12.84□□□□□ -0.35
SS18L1-204ENST00000491916 TMEM100Q9NV29 134 aa12.84□□□□□ -0.35
SS18L1-204ENST00000491916 TREM2Q9NZC2 230 aa12.84□□□□□ -0.35
SS18L1-204ENST00000491916 IL19Q9UHD0 177 aa12.84□□□□□ -0.35
SS18L1-204ENST00000491916 HIVEP2P31629 2446 aa12.84□□□□□ -0.35
SS18L1-204ENST00000491916 LRP5LA4QPB2 252 aa12.83□□□□□ -0.36
SS18L1-204ENST00000491916 F5H5P2 479 aa12.83□□□□□ -0.36
SS18L1-204ENST00000491916 TBX1O43435 398 aa12.83□□□□□ -0.36
SS18L1-204ENST00000491916 WBP4O75554 376 aaKnown RBP12.83□□□□□ -0.36
SS18L1-204ENST00000491916 CLIC3O95833 236 aa12.83□□□□□ -0.36
SS18L1-204ENST00000491916 OR2T7P0C7T2 308 aa12.83□□□□□ -0.36
SS18L1-204ENST00000491916 IGHV4-31P0DP07 118 aa12.83□□□□□ -0.36
SS18L1-204ENST00000491916 ACKR3P25106 362 aa12.83□□□□□ -0.36
SS18L1-204ENST00000491916 PMELP40967 661 aa12.83□□□□□ -0.36
SS18L1-204ENST00000491916 MTNR1AP48039 350 aa12.83□□□□□ -0.36
SS18L1-204ENST00000491916 MMP16P51512 607 aa12.83□□□□□ -0.36
SS18L1-204ENST00000491916 ISL1P61371 349 aa12.83□□□□□ -0.36
SS18L1-204ENST00000491916 EGR3Q06889 387 aa12.83□□□□□ -0.36
SS18L1-204ENST00000491916 POU4F2Q12837 409 aa12.83□□□□□ -0.36
SS18L1-204ENST00000491916 OR8B8Q15620 311 aa12.83□□□□□ -0.36
SS18L1-204ENST00000491916 MEDAGQ5VYS4 303 aa12.83□□□□□ -0.36
SS18L1-204ENST00000491916 KCTD18Q6PI47 426 aaPredicted RBP12.83□□□□□ -0.36
SS18L1-204ENST00000491916 ZNF540Q8NDQ6 660 aa12.83□□□□□ -0.36
SS18L1-204ENST00000491916 OR2T27Q8NH04 317 aa12.83□□□□□ -0.36
SS18L1-204ENST00000491916 NRG4Q8WWG1 115 aa12.83□□□□□ -0.36
SS18L1-204ENST00000491916 RFKQ969G6 155 aa12.83□□□□□ -0.36
SS18L1-204ENST00000491916 REEP6Q96HR9 211 aa12.83□□□□□ -0.36
SS18L1-204ENST00000491916 MEGF10Q96KG7 1140 aa12.83□□□□□ -0.36
SS18L1-204ENST00000491916 OR2V2Q96R30 315 aa12.83□□□□□ -0.36
SS18L1-204ENST00000491916 SIGLEC11Q96RL6 698 aa12.83□□□□□ -0.36
SS18L1-204ENST00000491916 TBX5Q99593 518 aa12.83□□□□□ -0.36
SS18L1-204ENST00000491916 ZNF649Q9BS31 505 aa12.83□□□□□ -0.36
SS18L1-204ENST00000491916 MROQ9BYG7 248 aa12.83□□□□□ -0.36
SS18L1-204ENST00000491916 OPA3Q9H6K4 179 aa12.83□□□□□ -0.36
SS18L1-204ENST00000491916 G6PC2Q9NQR9 355 aa12.83□□□□□ -0.36
SS18L1-204ENST00000491916 C8orf4Q9NR00 106 aa12.83□□□□□ -0.36
SS18L1-204ENST00000491916 EXOGQ9Y2C4 368 aaKnown RBP12.83□□□□□ -0.36
SS18L1-204ENST00000491916 TMEM269A0A1B0GVZ9 245 aa12.82□□□□□ -0.36
SS18L1-204ENST00000491916 ACOD1A6NK06 481 aa12.82□□□□□ -0.36
SS18L1-204ENST00000491916 ZNF670-ZNF695F2Z2N8 137 aa12.82□□□□□ -0.36
SS18L1-204ENST00000491916 PTBP3O95758 552 aaKnown RBP12.82□□□□□ -0.36
SS18L1-204ENST00000491916 CA6P23280 308 aa12.82□□□□□ -0.36
SS18L1-204ENST00000491916 GSK3AP49840 483 aa12.82□□□□□ -0.36
SS18L1-204ENST00000491916 ZNF691Q5VV52 312 aa12.82□□□□□ -0.36
SS18L1-204ENST00000491916 PLEKHG7Q6ZR37 379 aa12.82□□□□□ -0.36
SS18L1-204ENST00000491916 KRT74Q7RTS7 529 aa12.82□□□□□ -0.36
SS18L1-204ENST00000491916 LGALS12Q96DT0 336 aa12.82□□□□□ -0.36
SS18L1-204ENST00000491916 RNFT2Q96EX2 444 aa12.82□□□□□ -0.36
SS18L1-204ENST00000491916 C1orf159Q96HA4 380 aa12.82□□□□□ -0.36
SS18L1-204ENST00000491916 PGAM5Q96HS1 289 aa12.82□□□□□ -0.36
SS18L1-204ENST00000491916 EGLN1Q9GZT9 426 aa12.82□□□□□ -0.36
SS18L1-204ENST00000491916 OR10A2Q9H208 303 aa12.82□□□□□ -0.36
SS18L1-204ENST00000491916 SP140LQ9H930 580 aa12.82□□□□□ -0.36
SS18L1-204ENST00000491916 GCM1Q9NP62 436 aa12.82□□□□□ -0.36
SS18L1-204ENST00000491916 MRPS18AQ9NVS2 196 aaKnown RBP12.82□□□□□ -0.36
SS18L1-204ENST00000491916 MRPL15Q9P015 296 aaKnown RBP12.82□□□□□ -0.36
SS18L1-204ENST00000491916 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.82□□□□□ -0.36
SS18L1-204ENST00000491916 A0A0U1RQV5 110 aa12.81□□□□□ -0.36
SS18L1-204ENST00000491916 LOC100289279A0A1B0GTE1 492 aa12.81□□□□□ -0.36
SS18L1-204ENST00000491916 GGT3PA6NGU5 568 aa12.81□□□□□ -0.36
SS18L1-204ENST00000491916 PHYHO14832 338 aa12.81□□□□□ -0.36
SS18L1-204ENST00000491916 TPD52L2O43399 206 aaKnown RBP12.81□□□□□ -0.36
SS18L1-204ENST00000491916 CD5LO43866 347 aa12.81□□□□□ -0.36
SS18L1-204ENST00000491916 DBTP11182 482 aaKnown RBP12.81□□□□□ -0.36
SS18L1-204ENST00000491916 CD200P41217 278 aa12.81□□□□□ -0.36
SS18L1-204ENST00000491916 GPR6P46095 362 aaPredicted RBP12.81□□□□□ -0.36
SS18L1-204ENST00000491916 RIDAP52758 137 aaKnown RBP12.81□□□□□ -0.36
SS18L1-204ENST00000491916 LMO4P61968 165 aa12.81□□□□□ -0.36
SS18L1-204ENST00000491916 ZNF91Q05481 1191 aa12.81□□□□□ -0.36
SS18L1-204ENST00000491916 SLC34A1Q06495 639 aa12.81□□□□□ -0.36
SS18L1-204ENST00000491916 SMN1Q16637 294 aaKnown RBP12.81□□□□□ -0.36
SS18L1-204ENST00000491916 TIGD6Q17RP2 521 aa12.81□□□□□ -0.36
SS18L1-204ENST00000491916 LAIR2Q6ISS4 152 aa12.81□□□□□ -0.36
SS18L1-204ENST00000491916 SPRYD4Q8WW59 207 aaPredicted RBP12.81□□□□□ -0.36
SS18L1-204ENST00000491916 CCL17Q92583 94 aa12.81□□□□□ -0.36
SS18L1-204ENST00000491916 DVL3Q92997 716 aaPredicted RBP12.81□□□□□ -0.36
SS18L1-204ENST00000491916 PBOV1Q9GZY1 135 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms