RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 LRRN1Q6UXK5 716 aa6.91□□□□□ -1.3
LSM2-213ENST00000491421 CD300LDQ6UXZ3 194 aa6.91□□□□□ -1.3
LSM2-213ENST00000491421 DCDC5Q6ZRR9 648 aa6.91□□□□□ -1.3
LSM2-213ENST00000491421 IQCF1Q8N6M8 205 aa6.91□□□□□ -1.3
LSM2-213ENST00000491421 SIGLECL1Q8N7X8 197 aa6.91□□□□□ -1.3
LSM2-213ENST00000491421 ZDHHC22Q8N966 263 aa6.91□□□□□ -1.3
LSM2-213ENST00000491421 GIPC3Q8TF64 312 aa6.91□□□□□ -1.3
LSM2-213ENST00000491421 OTULINQ96BN8 352 aa6.91□□□□□ -1.3
LSM2-213ENST00000491421 CLPTM1LQ96KA5 538 aa6.91□□□□□ -1.3
LSM2-213ENST00000491421 FEVQ99581 238 aa6.91□□□□□ -1.3
LSM2-213ENST00000491421 KCNJ15Q99712 375 aa6.91□□□□□ -1.3
LSM2-213ENST00000491421 NIPSNAP1Q9BPW8 284 aa6.91□□□□□ -1.3
LSM2-213ENST00000491421 CHID1Q9BWS9 393 aa6.91□□□□□ -1.3
LSM2-213ENST00000491421 MMADHCQ9H3L0 296 aaPredicted RBP6.91□□□□□ -1.3
LSM2-213ENST00000491421 OPA3Q9H6K4 179 aa6.91□□□□□ -1.3
LSM2-213ENST00000491421 FN3KRPQ9HA64 309 aa6.91□□□□□ -1.3
LSM2-213ENST00000491421 ESM1Q9NQ30 184 aa6.91□□□□□ -1.3
LSM2-213ENST00000491421 CMC2Q9NRP2 79 aa6.91□□□□□ -1.3
LSM2-213ENST00000491421 MRPL15Q9P015 296 aaKnown RBP6.91□□□□□ -1.3
LSM2-213ENST00000491421 CLN8Q9UBY8 286 aa6.91□□□□□ -1.3
LSM2-213ENST00000491421 ZNF69Q9UC07 566 aa6.91□□□□□ -1.3
LSM2-213ENST00000491421 TANC2Q9HCD6 1990 aa6.91□□□□□ -1.3
LSM2-213ENST00000491421 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.9□□□□□ -1.3
LSM2-213ENST00000491421 TMEM89A2RUT3 159 aa6.9□□□□□ -1.3
LSM2-213ENST00000491421 ARRDC5A6NEK1 342 aa6.9□□□□□ -1.3
LSM2-213ENST00000491421 FAM183AA6NL82 134 aa6.9□□□□□ -1.3
LSM2-213ENST00000491421 GNGT2O14610 69 aa6.9□□□□□ -1.3
LSM2-213ENST00000491421 ACOT8O14734 319 aa6.9□□□□□ -1.3
LSM2-213ENST00000491421 PHYHO14832 338 aa6.9□□□□□ -1.3
LSM2-213ENST00000491421 TBX1O43435 398 aa6.9□□□□□ -1.3
LSM2-213ENST00000491421 XRCC2O43543 280 aa6.9□□□□□ -1.3
LSM2-213ENST00000491421 ANXA2P07355 339 aaKnown RBP6.9□□□□□ -1.3
LSM2-213ENST00000491421 PPIAL4GP0DN37 164 aa6.9□□□□□ -1.3
LSM2-213ENST00000491421 PAICSP22234 425 aaKnown RBP6.9□□□□□ -1.3
LSM2-213ENST00000491421 POU1F1P28069 291 aa6.9□□□□□ -1.3
LSM2-213ENST00000491421 HSD11B1P28845 292 aa6.9□□□□□ -1.3
LSM2-213ENST00000491421 GSTT1P30711 240 aa6.9□□□□□ -1.3
LSM2-213ENST00000491421 GRK5P34947 590 aa6.9□□□□□ -1.3
LSM2-213ENST00000491421 CX3CR1P49238 355 aa6.9□□□□□ -1.3
LSM2-213ENST00000491421 GRB2P62993 217 aaKnown RBP6.9□□□□□ -1.3
LSM2-213ENST00000491421 PAX2Q02962 417 aa6.9□□□□□ -1.3
LSM2-213ENST00000491421 PAX8Q06710 450 aa6.9□□□□□ -1.3
LSM2-213ENST00000491421 MZT1Q08AG7 82 aa6.9□□□□□ -1.3
LSM2-213ENST00000491421 KCNJ8Q15842 424 aa6.9□□□□□ -1.3
LSM2-213ENST00000491421 LINC01590Q5TEZ4 76 aa6.9□□□□□ -1.3
LSM2-213ENST00000491421 LYPD2Q6UXB3 125 aa6.9□□□□□ -1.3
LSM2-213ENST00000491421 ERI1Q8IV48 349 aaKnown RBP6.9□□□□□ -1.3
LSM2-213ENST00000491421 ADGRG5Q8IZF4 528 aa6.9□□□□□ -1.3
LSM2-213ENST00000491421 PARP8Q8N3A8 854 aa6.9□□□□□ -1.3
LSM2-213ENST00000491421 C3orf56Q8N813 242 aa6.9□□□□□ -1.3
LSM2-213ENST00000491421 BOLLQ8N9W6 283 aaKnown RBP6.9□□□□□ -1.3
LSM2-213ENST00000491421 SPERTQ8NA61 448 aa6.9□□□□□ -1.3
LSM2-213ENST00000491421 C19orf18Q8NEA5 215 aa6.9□□□□□ -1.3
LSM2-213ENST00000491421 OR56B2PQ8NGI1 322 aa6.9□□□□□ -1.3
LSM2-213ENST00000491421 OR6N2Q8NGY6 317 aa6.9□□□□□ -1.3
LSM2-213ENST00000491421 RAB40AQ8WXH6 277 aa6.9□□□□□ -1.3
LSM2-213ENST00000491421 INTS14Q96SY0 518 aa6.9□□□□□ -1.3
LSM2-213ENST00000491421 THTPAQ9BU02 230 aa6.9□□□□□ -1.3
LSM2-213ENST00000491421 MS4A7Q9GZW8 240 aaPredicted RBP6.9□□□□□ -1.3
LSM2-213ENST00000491421 C1orf21Q9H246 121 aa6.9□□□□□ -1.3
LSM2-213ENST00000491421 SP140LQ9H930 580 aa6.9□□□□□ -1.3
LSM2-213ENST00000491421 MED20Q9H944 212 aa6.9□□□□□ -1.3
LSM2-213ENST00000491421 C14orf119Q9NWQ9 140 aa6.9□□□□□ -1.3
LSM2-213ENST00000491421 C1orf123Q9NWV4 160 aa6.9□□□□□ -1.3
LSM2-213ENST00000491421 TAS2R1Q9NYW7 299 aa6.9□□□□□ -1.3
LSM2-213ENST00000491421 RNF7Q9UBF6 113 aa6.9□□□□□ -1.3
LSM2-213ENST00000491421 IGHV3OR16-10A0A075B7F0 116 aa6.89□□□□□ -1.31
LSM2-213ENST00000491421 TRAV40A0A0B4J280 105 aa6.89□□□□□ -1.31
LSM2-213ENST00000491421 DNAJC9-AS1A6NH13 148 aa6.89□□□□□ -1.31
LSM2-213ENST00000491421 A6NLC8 198 aa6.89□□□□□ -1.31
LSM2-213ENST00000491421 AQP12BA6NM10 295 aa6.89□□□□□ -1.31
LSM2-213ENST00000491421 ANKRD30BLA7E2S9 258 aa6.89□□□□□ -1.31
LSM2-213ENST00000491421 C3orf80F5H4A9 247 aa6.89□□□□□ -1.31
LSM2-213ENST00000491421 LGALS8O00214 317 aa6.89□□□□□ -1.31
LSM2-213ENST00000491421 ENSAO43768 121 aaKnown RBP6.89□□□□□ -1.31
LSM2-213ENST00000491421 E2F6O75461 281 aa6.89□□□□□ -1.31
LSM2-213ENST00000491421 PTBP3O95758 552 aaKnown RBP6.89□□□□□ -1.31
LSM2-213ENST00000491421 APOC1P02654 83 aa6.89□□□□□ -1.31
LSM2-213ENST00000491421 GRPP07492 148 aa6.89□□□□□ -1.31
LSM2-213ENST00000491421 IGHV4-38-2P0DP08 117 aa6.89□□□□□ -1.31
LSM2-213ENST00000491421 HOXB6P17509 224 aaKnown RBP6.89□□□□□ -1.31
LSM2-213ENST00000491421 DDOSTP39656 456 aa6.89□□□□□ -1.31
LSM2-213ENST00000491421 PSMB10P40306 273 aa6.89□□□□□ -1.31
LSM2-213ENST00000491421 HOXA4Q00056 320 aaPredicted RBP6.89□□□□□ -1.31
LSM2-213ENST00000491421 BAMBIQ13145 260 aa6.89□□□□□ -1.31
LSM2-213ENST00000491421 OR8B8Q15620 311 aa6.89□□□□□ -1.31
LSM2-213ENST00000491421 TIGD6Q17RP2 521 aa6.89□□□□□ -1.31
LSM2-213ENST00000491421 GFOD2Q3B7J2 385 aa6.89□□□□□ -1.31
LSM2-213ENST00000491421 WDR25Q64LD2 544 aaPredicted RBP6.89□□□□□ -1.31
LSM2-213ENST00000491421 SFRP4Q6FHJ7 346 aaPredicted RBP6.89□□□□□ -1.31
LSM2-213ENST00000491421 DOK3Q7L591 496 aa6.89□□□□□ -1.31
LSM2-213ENST00000491421 SHFQ7M4L6 423 aa6.89□□□□□ -1.31
LSM2-213ENST00000491421 SLC16A9Q7RTY1 509 aa6.89□□□□□ -1.31
LSM2-213ENST00000491421 DPY19L4Q7Z388 723 aa6.89□□□□□ -1.31
LSM2-213ENST00000491421 AQP12AQ8IXF9 295 aa6.89□□□□□ -1.31
LSM2-213ENST00000491421 BCL6BQ8N143 479 aaPredicted RBP6.89□□□□□ -1.31
LSM2-213ENST00000491421 OR8S1Q8NH09 359 aa6.89□□□□□ -1.31
LSM2-213ENST00000491421 CANT1Q8WVQ1 401 aa6.89□□□□□ -1.31
LSM2-213ENST00000491421 RNF133Q8WVZ7 376 aa6.89□□□□□ -1.31
LSM2-213ENST00000491421 SPSB4Q96A44 273 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms