RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 SCO1O75880 301 aa20.07■□□□□ 0.8
USF3-203ENST00000491165 ITGA5P08648 1049 aa20.07■□□□□ 0.8
USF3-203ENST00000491165 AKAIN1P0CW23 69 aa20.07■□□□□ 0.8
USF3-203ENST00000491165 GTF2F2P13984 249 aa20.07■□□□□ 0.8
USF3-203ENST00000491165 POU3F2P20265 443 aaPredicted RBP20.07■□□□□ 0.8
USF3-203ENST00000491165 WDR89Q96FK6 387 aaPredicted RBP20.07■□□□□ 0.8
USF3-203ENST00000491165 B9D1Q9UPM9 204 aa20.07■□□□□ 0.8
USF3-203ENST00000491165 ZFYVE26Q68DK2 2539 aa20.07■□□□□ 0.8
USF3-203ENST00000491165 TRAV18A0A075B6X5 111 aa20.06■□□□□ 0.8
USF3-203ENST00000491165 LIPT2A6NK58 231 aa20.06■□□□□ 0.8
USF3-203ENST00000491165 AHSA1O95433 338 aa20.06■□□□□ 0.8
USF3-203ENST00000491165 ZNF324BQ6AW86 544 aaPredicted RBP20.06■□□□□ 0.8
USF3-203ENST00000491165 SLC35D2Q76EJ3 337 aa20.06■□□□□ 0.8
USF3-203ENST00000491165 MAMDC2Q7Z304 686 aaPredicted RBP20.06■□□□□ 0.8
USF3-203ENST00000491165 OR4D10Q8NGI6 311 aa20.06■□□□□ 0.8
USF3-203ENST00000491165 RBPMSQ93062 196 aaKnown RBP20.06■□□□□ 0.8
USF3-203ENST00000491165 FAM3DQ96BQ1 224 aa20.06■□□□□ 0.8
USF3-203ENST00000491165 SNRNP40Q96DI7 357 aaKnown RBP20.06■□□□□ 0.8
USF3-203ENST00000491165 POTEKPQ9BYX7 375 aa20.06■□□□□ 0.8
USF3-203ENST00000491165 SLC17A5Q9NRA2 495 aa20.06■□□□□ 0.8
USF3-203ENST00000491165 RDH8Q9NYR8 311 aa20.06■□□□□ 0.8
USF3-203ENST00000491165 OPN4Q9UHM6 478 aa20.06■□□□□ 0.8
USF3-203ENST00000491165 LOC100289279A0A1B0GTE1 492 aa20.06■□□□□ 0.8
USF3-203ENST00000491165 LOC105371267A0A1B0GV96 52 aa20.06■□□□□ 0.8
USF3-203ENST00000491165 SLC17A2O00624 439 aa20.06■□□□□ 0.8
USF3-203ENST00000491165 EIF1AYO14602 144 aaKnown RBP20.06■□□□□ 0.8
USF3-203ENST00000491165 ZNF708P17019 499 aa20.06■□□□□ 0.8
USF3-203ENST00000491165 CENPAP49450 140 aa20.06■□□□□ 0.8
USF3-203ENST00000491165 SEC61A1P61619 476 aaKnown RBP20.06■□□□□ 0.8
USF3-203ENST00000491165 GUCA2AQ02747 115 aa20.06■□□□□ 0.8
USF3-203ENST00000491165 SRYQ05066 204 aa20.06■□□□□ 0.8
USF3-203ENST00000491165 MFSD13AQ14CX5 517 aa20.06■□□□□ 0.8
USF3-203ENST00000491165 C2orf76Q3KRA6 126 aa20.06■□□□□ 0.8
USF3-203ENST00000491165 TMPPEQ6ZT21 453 aa20.06■□□□□ 0.8
USF3-203ENST00000491165 ZNF679Q8IYX0 411 aa20.06■□□□□ 0.8
USF3-203ENST00000491165 SRXN1Q9BYN0 137 aa20.06■□□□□ 0.8
USF3-203ENST00000491165 PRSS37A4D1T9 235 aa20.05■□□□□ 0.8
USF3-203ENST00000491165 TTLL8A6PVC2 850 aa20.05■□□□□ 0.8
USF3-203ENST00000491165 PLGP00747 810 aaPredicted RBP20.05■□□□□ 0.8
USF3-203ENST00000491165 PRSS3P35030 304 aa20.05■□□□□ 0.8
USF3-203ENST00000491165 SLC18B1Q6NT16 456 aa20.05■□□□□ 0.8
USF3-203ENST00000491165 TMEM65Q6PI78 240 aa20.05■□□□□ 0.8
USF3-203ENST00000491165 RNF128Q8TEB7 428 aa20.05■□□□□ 0.8
USF3-203ENST00000491165 ZNF845Q96IR2 970 aaPredicted RBP20.05■□□□□ 0.8
USF3-203ENST00000491165 EXO5Q9H790 373 aa20.05■□□□□ 0.8
USF3-203ENST00000491165 GTF2A1LQ9UNN4 478 aa20.05■□□□□ 0.8
USF3-203ENST00000491165 HMSDA8MTL9 139 aa20.05■□□□□ 0.8
USF3-203ENST00000491165 RAMP1O60894 148 aa20.05■□□□□ 0.8
USF3-203ENST00000491165 KDM4BO94953 1096 aa20.05■□□□□ 0.8
USF3-203ENST00000491165 OR6A2O95222 327 aa20.05■□□□□ 0.8
USF3-203ENST00000491165 MT-ATP6P00846 226 aa20.05■□□□□ 0.8
USF3-203ENST00000491165 S100A11P31949 105 aa20.05■□□□□ 0.8
USF3-203ENST00000491165 RPL27P61353 136 aaKnown RBP20.05■□□□□ 0.8
USF3-203ENST00000491165 SSBP1Q04837 148 aaKnown RBP20.05■□□□□ 0.8
USF3-203ENST00000491165 SGCBQ16585 318 aa20.05■□□□□ 0.8
USF3-203ENST00000491165 TEX30Q5JUR7 227 aa20.05■□□□□ 0.8
USF3-203ENST00000491165 OTPQ5XKR4 325 aa20.05■□□□□ 0.8
USF3-203ENST00000491165 C5orf46Q6UWT4 87 aa20.05■□□□□ 0.8
USF3-203ENST00000491165 KDM8Q8N371 416 aa20.05■□□□□ 0.8
USF3-203ENST00000491165 OR51S1Q8NGJ8 323 aa20.05■□□□□ 0.8
USF3-203ENST00000491165 MFSD8Q8NHS3 518 aa20.05■□□□□ 0.8
USF3-203ENST00000491165 FOXN4Q96NZ1 517 aa20.05■□□□□ 0.8
USF3-203ENST00000491165 ZNF587Q96SQ5 575 aaPredicted RBP20.05■□□□□ 0.8
USF3-203ENST00000491165 SLC22A13Q9Y226 551 aa20.05■□□□□ 0.8
USF3-203ENST00000491165 HDGFL3Q9Y3E1 203 aa20.05■□□□□ 0.8
USF3-203ENST00000491165 hCG_1807616A0A1W2PRN6 198 aa20.04■□□□□ 0.8
USF3-203ENST00000491165 RGS11O94810 467 aa20.04■□□□□ 0.8
USF3-203ENST00000491165 SPARCP09486 303 aa20.04■□□□□ 0.8
USF3-203ENST00000491165 H2BFSP57053 126 aa20.04■□□□□ 0.8
USF3-203ENST00000491165 ACKR1Q16570 336 aa20.04■□□□□ 0.8
USF3-203ENST00000491165 SMUG1Q53HV7 270 aa20.04■□□□□ 0.8
USF3-203ENST00000491165 FAM180AQ6UWF9 173 aa20.04■□□□□ 0.8
USF3-203ENST00000491165 KRT77Q7Z794 578 aa20.04■□□□□ 0.8
USF3-203ENST00000491165 ZSCAN2Q7Z7L9 614 aaPredicted RBP20.04■□□□□ 0.8
USF3-203ENST00000491165 BIVMQ86UB2 503 aa20.04■□□□□ 0.8
USF3-203ENST00000491165 OR2AK2Q8NG84 335 aa20.04■□□□□ 0.8
USF3-203ENST00000491165 KCNK15Q9H427 330 aa20.04■□□□□ 0.8
USF3-203ENST00000491165 CFAP46Q8IYW2 2715 aa20.04■□□□□ 0.8
USF3-203ENST00000491165 IGHV3-15A0A0B4J1V0 119 aa20.03■□□□□ 0.8
USF3-203ENST00000491165 MEIS3P1A6NDR6 274 aa20.03■□□□□ 0.8
USF3-203ENST00000491165 F5H5P2 479 aa20.03■□□□□ 0.8
USF3-203ENST00000491165 SULT2B1O00204 365 aa20.03■□□□□ 0.8
USF3-203ENST00000491165 ARPC5O15511 151 aa20.03■□□□□ 0.8
USF3-203ENST00000491165 OR2T1O43869 369 aa20.03■□□□□ 0.8
USF3-203ENST00000491165 RP2O75695 350 aa20.03■□□□□ 0.8
USF3-203ENST00000491165 SIX6O95475 246 aa20.03■□□□□ 0.8
USF3-203ENST00000491165 KLRB1Q12918 225 aa20.03■□□□□ 0.8
USF3-203ENST00000491165 HLXQ14774 488 aaPredicted RBP20.03■□□□□ 0.8
USF3-203ENST00000491165 OR10D3Q8NH80 312 aa20.03■□□□□ 0.8
USF3-203ENST00000491165 ZNF519Q8TB69 540 aa20.03■□□□□ 0.8
USF3-203ENST00000491165 UCN2Q96RP3 112 aa20.03■□□□□ 0.8
USF3-203ENST00000491165 ASF1BQ9NVP2 202 aa20.03■□□□□ 0.8
USF3-203ENST00000491165 DHDHQ9UQ10 334 aa20.03■□□□□ 0.8
USF3-203ENST00000491165 ZGRF1Q86YA3 2104 aa20.03■□□□□ 0.8
USF3-203ENST00000491165 LINC01387J3KSC0 135 aa20.03■□□□□ 0.8
USF3-203ENST00000491165 GOSR2O14653 212 aa20.03■□□□□ 0.8
USF3-203ENST00000491165 SLC16A7O60669 478 aa20.03■□□□□ 0.8
USF3-203ENST00000491165 ACSM4P0C7M7 580 aa20.03■□□□□ 0.8
USF3-203ENST00000491165 ZNF35P13682 527 aa20.03■□□□□ 0.8
USF3-203ENST00000491165 P2RY4P51582 365 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms