RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 RENP00797 406 aa16.97■□□□□ 0.31
CLIP2-208ENST00000491075 H1F0P07305 194 aaKnown RBP16.97■□□□□ 0.31
CLIP2-208ENST00000491075 GRPP07492 148 aa16.97■□□□□ 0.31
CLIP2-208ENST00000491075 EEF1B2P24534 225 aaKnown RBP16.97■□□□□ 0.31
CLIP2-208ENST00000491075 ZNF92Q03936 586 aa16.97■□□□□ 0.31
CLIP2-208ENST00000491075 FGD3Q5JSP0 725 aa16.97■□□□□ 0.31
CLIP2-208ENST00000491075 SMARCD3Q6STE5 483 aa16.97■□□□□ 0.31
CLIP2-208ENST00000491075 ZNF826PQ6ZT77 177 aa16.97■□□□□ 0.31
CLIP2-208ENST00000491075 Q6ZTK2 550 aa16.97■□□□□ 0.31
CLIP2-208ENST00000491075 ARPINQ7Z6K5 226 aa16.97■□□□□ 0.31
CLIP2-208ENST00000491075 LY6G5BQ8NDX9 201 aa16.97■□□□□ 0.31
CLIP2-208ENST00000491075 OR5R1Q8NH85 324 aa16.97■□□□□ 0.31
CLIP2-208ENST00000491075 SPTSSAQ969W0 71 aa16.97■□□□□ 0.31
CLIP2-208ENST00000491075 ERMAPQ96PL5 475 aaPredicted RBP16.97■□□□□ 0.31
CLIP2-208ENST00000491075 C14orf119Q9NWQ9 140 aa16.97■□□□□ 0.31
CLIP2-208ENST00000491075 FBLN5Q9UBX5 448 aa16.97■□□□□ 0.31
CLIP2-208ENST00000491075 ANKRD61A6NGH8 418 aa16.96■□□□□ 0.31
CLIP2-208ENST00000491075 UNC119BA6NIH7 251 aa16.96■□□□□ 0.31
CLIP2-208ENST00000491075 LHBP01229 141 aa16.96■□□□□ 0.31
CLIP2-208ENST00000491075 HERPUD1Q15011 391 aa16.96■□□□□ 0.31
CLIP2-208ENST00000491075 RFX4Q33E94 735 aa16.96■□□□□ 0.31
CLIP2-208ENST00000491075 SNAI3Q3KNW1 292 aa16.96■□□□□ 0.31
CLIP2-208ENST00000491075 ZBTB46Q86UZ6 589 aa16.96■□□□□ 0.31
CLIP2-208ENST00000491075 OR2AE1Q8NHA4 323 aa16.96■□□□□ 0.31
CLIP2-208ENST00000491075 NMNAT3Q96T66 252 aa16.96■□□□□ 0.31
CLIP2-208ENST00000491075 IGHV3OR15-7A0A075B7D8 119 aa16.95■□□□□ 0.3
CLIP2-208ENST00000491075 LOC100653049A0A140TA62 436 aa16.95■□□□□ 0.3
CLIP2-208ENST00000491075 BHLHE40O14503 412 aa16.95■□□□□ 0.3
CLIP2-208ENST00000491075 NPFFO15130 113 aa16.95■□□□□ 0.3
CLIP2-208ENST00000491075 GSTA4O15217 222 aa16.95■□□□□ 0.3
CLIP2-208ENST00000491075 KRT34O76011 436 aa16.95■□□□□ 0.3
CLIP2-208ENST00000491075 PAHP00439 452 aa16.95■□□□□ 0.3
CLIP2-208ENST00000491075 SERPINA1P01009 418 aa16.95■□□□□ 0.3
CLIP2-208ENST00000491075 HLA-DQA2P01906 255 aa16.95■□□□□ 0.3
CLIP2-208ENST00000491075 TROVE2P10155 538 aaKnown RBP eCLIP16.95■□□□□ 0.3
CLIP2-208ENST00000491075 MUC1P15941 1255 aaPredicted RBP16.95■□□□□ 0.3
CLIP2-208ENST00000491075 GABRA5P31644 462 aa16.95■□□□□ 0.3
CLIP2-208ENST00000491075 FAM189A2Q15884 450 aa16.95■□□□□ 0.3
CLIP2-208ENST00000491075 MICBQ29980 383 aa16.95■□□□□ 0.3
CLIP2-208ENST00000491075 SLC35E4Q6ICL7 350 aa16.95■□□□□ 0.3
CLIP2-208ENST00000491075 FANK1Q8TC84 345 aa16.95■□□□□ 0.3
CLIP2-208ENST00000491075 OPA3Q9H6K4 179 aa16.95■□□□□ 0.3
CLIP2-208ENST00000491075 RPRD1BQ9NQG5 326 aaKnown RBP16.95■□□□□ 0.3
CLIP2-208ENST00000491075 SIRT7Q9NRC8 400 aa16.95■□□□□ 0.3
CLIP2-208ENST00000491075 CMTM6Q9NX76 183 aa16.95■□□□□ 0.3
CLIP2-208ENST00000491075 KCNG2Q9UJ96 466 aa16.95■□□□□ 0.3
CLIP2-208ENST00000491075 NBEAL2Q6ZNJ1 2754 aa16.94■□□□□ 0.3
CLIP2-208ENST00000491075 RNASEK-C17orf49H0YIS7 233 aa16.94■□□□□ 0.3
CLIP2-208ENST00000491075 ARPC3O15145 178 aa16.94■□□□□ 0.3
CLIP2-208ENST00000491075 GPR37O15354 613 aa16.94■□□□□ 0.3
CLIP2-208ENST00000491075 POU4F2Q12837 409 aa16.94■□□□□ 0.3
CLIP2-208ENST00000491075 PCK2Q16822 640 aa16.94■□□□□ 0.3
CLIP2-208ENST00000491075 C11orf88Q6PI97 169 aa16.94■□□□□ 0.3
CLIP2-208ENST00000491075 SLC36A1Q7Z2H8 476 aa16.94■□□□□ 0.3
CLIP2-208ENST00000491075 FGFRL1Q8N441 504 aa16.94■□□□□ 0.3
CLIP2-208ENST00000491075 MAP6Q96JE9 813 aa16.94■□□□□ 0.3
CLIP2-208ENST00000491075 PPA2Q9H2U2 334 aa16.94■□□□□ 0.3
CLIP2-208ENST00000491075 RNPEPL1Q9HAU8 725 aa16.94■□□□□ 0.3
CLIP2-208ENST00000491075 SAR1AQ9NR31 198 aa16.94■□□□□ 0.3
CLIP2-208ENST00000491075 GMPR2Q9P2T1 348 aaKnown RBP16.94■□□□□ 0.3
CLIP2-208ENST00000491075 FAM32AQ9Y421 112 aaKnown RBP16.94■□□□□ 0.3
CLIP2-208ENST00000491075 PRB2P02812 416 aaPredicted RBP16.93■□□□□ 0.3
CLIP2-208ENST00000491075 HIST1H1CP16403 213 aaKnown RBP16.93■□□□□ 0.3
CLIP2-208ENST00000491075 SLC6A6P31641 620 aa16.93■□□□□ 0.3
CLIP2-208ENST00000491075 OTX1P32242 354 aaPredicted RBP16.93■□□□□ 0.3
CLIP2-208ENST00000491075 GRK5P34947 590 aa16.93■□□□□ 0.3
CLIP2-208ENST00000491075 LIPEQ05469 1076 aa16.93■□□□□ 0.3
CLIP2-208ENST00000491075 DBPQ10586 325 aaPredicted RBP16.93■□□□□ 0.3
CLIP2-208ENST00000491075 WDR38Q5JTN6 314 aa16.93■□□□□ 0.3
CLIP2-208ENST00000491075 GLYATL3Q5SZD4 288 aa16.93■□□□□ 0.3
CLIP2-208ENST00000491075 DRAM2Q6UX65 266 aa16.93■□□□□ 0.3
CLIP2-208ENST00000491075 OR56B2PQ8NGI1 322 aa16.93■□□□□ 0.3
CLIP2-208ENST00000491075 PPP1R14AQ96A00 147 aa16.93■□□□□ 0.3
CLIP2-208ENST00000491075 CCL13Q99616 98 aa16.93■□□□□ 0.3
CLIP2-208ENST00000491075 TRBV4-1A0A0J9YWV2 114 aa16.92■□□□□ 0.3
CLIP2-208ENST00000491075 A0A1B0GW55 424 aa16.92■□□□□ 0.3
CLIP2-208ENST00000491075 HMGB1P1B2RPK0 211 aaPredicted RBP16.92■□□□□ 0.3
CLIP2-208ENST00000491075 DUX4L2P0CJ85 424 aa16.92■□□□□ 0.3
CLIP2-208ENST00000491075 DUX4L3P0CJ86 424 aa16.92■□□□□ 0.3
CLIP2-208ENST00000491075 DUX4L4P0CJ87 422 aa16.92■□□□□ 0.3
CLIP2-208ENST00000491075 DUX4L5P0CJ88 424 aa16.92■□□□□ 0.3
CLIP2-208ENST00000491075 DUX4L6P0CJ89 424 aa16.92■□□□□ 0.3
CLIP2-208ENST00000491075 DUX4L7P0CJ90 424 aa16.92■□□□□ 0.3
CLIP2-208ENST00000491075 RHCEP18577 417 aa16.92■□□□□ 0.3
CLIP2-208ENST00000491075 SAA4P35542 130 aa16.92■□□□□ 0.3
CLIP2-208ENST00000491075 SEC23BQ15437 767 aa16.92■□□□□ 0.3
CLIP2-208ENST00000491075 DUX4L9Q6RFH8 374 aaPredicted RBP16.92■□□□□ 0.3
CLIP2-208ENST00000491075 SLC15A3Q8IY34 581 aa16.92■□□□□ 0.3
CLIP2-208ENST00000491075 OR8S1Q8NH09 359 aa16.92■□□□□ 0.3
CLIP2-208ENST00000491075 OR4K13Q8NH42 304 aa16.92■□□□□ 0.3
CLIP2-208ENST00000491075 LRRC29Q8WV35 223 aa16.92■□□□□ 0.3
CLIP2-208ENST00000491075 RCN3Q96D15 328 aa16.92■□□□□ 0.3
CLIP2-208ENST00000491075 OR52D1Q9H346 318 aa16.92■□□□□ 0.3
CLIP2-208ENST00000491075 MRPL22Q9NWU5 206 aaKnown RBP16.92■□□□□ 0.3
CLIP2-208ENST00000491075 NDUFAF4Q9P032 175 aa16.92■□□□□ 0.3
CLIP2-208ENST00000491075 DUX4Q9UBX2 424 aa16.92■□□□□ 0.3
CLIP2-208ENST00000491075 PRPF19Q9UMS4 504 aaKnown RBP16.92■□□□□ 0.3
CLIP2-208ENST00000491075 MEIOCA2RUB1 952 aa16.91■□□□□ 0.3
CLIP2-208ENST00000491075 NDUFB3O43676 98 aa16.91■□□□□ 0.3
CLIP2-208ENST00000491075 ZNF823P16415 610 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms