RNA–Protein interactions for RNA: ENST00000490398.5

COL9A3-214, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-214ENST00000490398 SPSB4Q96A44 273 aa15.24■□□□□ 0.03
COL9A3-214ENST00000490398 TTTY10Q9BZA0 68 aa15.24■□□□□ 0.03
COL9A3-214ENST00000490398 G6PC2Q9NQR9 355 aa15.24■□□□□ 0.03
COL9A3-214ENST00000490398 COPS3Q9UNS2 423 aa15.24■□□□□ 0.03
COL9A3-214ENST00000490398 DYSFO75923 2080 aa15.24■□□□□ 0.03
COL9A3-214ENST00000490398 GGT3PA6NGU5 568 aa15.23■□□□□ 0.03
COL9A3-214ENST00000490398 PSMD9O00233 223 aa15.23■□□□□ 0.03
COL9A3-214ENST00000490398 H2BFMP0C1H6 154 aa15.23■□□□□ 0.03
COL9A3-214ENST00000490398 SRD5A1P18405 259 aa15.23■□□□□ 0.03
COL9A3-214ENST00000490398 ALOX5APP20292 161 aa15.23■□□□□ 0.03
COL9A3-214ENST00000490398 SRP9P49458 86 aaKnown RBP15.23■□□□□ 0.03
COL9A3-214ENST00000490398 RAD23AP54725 363 aa15.23■□□□□ 0.03
COL9A3-214ENST00000490398 BTG1P62324 171 aa15.23■□□□□ 0.03
COL9A3-214ENST00000490398 FAM3AP98173 230 aa15.23■□□□□ 0.03
COL9A3-214ENST00000490398 AADACL4Q5VUY2 407 aa15.23■□□□□ 0.03
COL9A3-214ENST00000490398 SLC16A9Q7RTY1 509 aa15.23■□□□□ 0.03
COL9A3-214ENST00000490398 LRRC28Q86X40 367 aaPredicted RBP15.23■□□□□ 0.03
COL9A3-214ENST00000490398 C19orf18Q8NEA5 215 aa15.23■□□□□ 0.03
COL9A3-214ENST00000490398 CENPNQ96H22 339 aaPredicted RBP15.23■□□□□ 0.03
COL9A3-214ENST00000490398 TOR3AQ9H497 397 aa15.23■□□□□ 0.03
COL9A3-214ENST00000490398 UFSP2Q9NUQ7 469 aa15.23■□□□□ 0.03
COL9A3-214ENST00000490398 FCGR1AP12314 374 aa15.22■□□□□ 0.03
COL9A3-214ENST00000490398 CD200P41217 278 aa15.22■□□□□ 0.03
COL9A3-214ENST00000490398 SLC15A1P46059 708 aa15.22■□□□□ 0.03
COL9A3-214ENST00000490398 LCN2P80188 198 aa15.22■□□□□ 0.03
COL9A3-214ENST00000490398 OR8G1Q15617 311 aa15.22■□□□□ 0.03
COL9A3-214ENST00000490398 GFOD2Q3B7J2 385 aa15.22■□□□□ 0.03
COL9A3-214ENST00000490398 FAHD2BQ6P2I3 314 aaPredicted RBP15.22■□□□□ 0.03
COL9A3-214ENST00000490398 PEG10Q86TG7 708 aaKnown RBP15.22■□□□□ 0.03
COL9A3-214ENST00000490398 ZNF454Q8N9F8 522 aa15.22■□□□□ 0.03
COL9A3-214ENST00000490398 RAB39BQ96DA2 213 aa15.22■□□□□ 0.03
COL9A3-214ENST00000490398 FAHD2AQ96GK7 314 aa15.22■□□□□ 0.03
COL9A3-214ENST00000490398 REEP6Q96HR9 211 aa15.22■□□□□ 0.03
COL9A3-214ENST00000490398 IL4I1Q96RQ9 567 aa15.22■□□□□ 0.03
COL9A3-214ENST00000490398 ADAT1Q9BUB4 502 aaKnown RBP15.22■□□□□ 0.03
COL9A3-214ENST00000490398 TMEM165Q9HC07 324 aa15.22■□□□□ 0.03
COL9A3-214ENST00000490398 hCG_38984A0A1B0GV85 526 aa15.21■□□□□ 0.03
COL9A3-214ENST00000490398 MAGEB4O15481 346 aaPredicted RBP15.21■□□□□ 0.03
COL9A3-214ENST00000490398 XRCC2O43543 280 aa15.21■□□□□ 0.03
COL9A3-214ENST00000490398 FAM20BO75063 409 aa15.21■□□□□ 0.03
COL9A3-214ENST00000490398 TMEM163Q8TC26 289 aa15.21■□□□□ 0.03
COL9A3-214ENST00000490398 PGAM5Q96HS1 289 aa15.21■□□□□ 0.03
COL9A3-214ENST00000490398 LYZL4Q96KX0 146 aa15.21■□□□□ 0.03
COL9A3-214ENST00000490398 OSBPL10Q9BXB5 764 aa15.21■□□□□ 0.03
COL9A3-214ENST00000490398 TEX12Q9BXU0 123 aa15.21■□□□□ 0.03
COL9A3-214ENST00000490398 TMPRSS13Q9BYE2 586 aa15.21■□□□□ 0.03
COL9A3-214ENST00000490398 RIBC2Q9H4K1 309 aa15.21■□□□□ 0.03
COL9A3-214ENST00000490398 PATZ1Q9HBE1 687 aaKnown RBP15.21■□□□□ 0.03
COL9A3-214ENST00000490398 LAMP5Q9UJQ1 280 aa15.21■□□□□ 0.03
COL9A3-214ENST00000490398 LRP12Q9Y561 859 aa15.21■□□□□ 0.03
COL9A3-214ENST00000490398 ARHGAP32A7KAX9 2087 aa15.2■□□□□ 0.02
COL9A3-214ENST00000490398 TRAV20A0A0B4J274 112 aa15.2■□□□□ 0.02
COL9A3-214ENST00000490398 F5H0A9 414 aaPredicted RBP15.2■□□□□ 0.02
COL9A3-214ENST00000490398 HNF1AP20823 631 aa15.2■□□□□ 0.02
COL9A3-214ENST00000490398 GATA4P43694 442 aa15.2■□□□□ 0.02
COL9A3-214ENST00000490398 TIGD6Q17RP2 521 aa15.2■□□□□ 0.02
COL9A3-214ENST00000490398 TMEM155Q4W5P6 130 aa15.2■□□□□ 0.02
COL9A3-214ENST00000490398 ZNF826PQ6ZT77 177 aa15.2■□□□□ 0.02
COL9A3-214ENST00000490398 RHOUQ7L0Q8 258 aa15.2■□□□□ 0.02
COL9A3-214ENST00000490398 MEPCEQ7L2J0 689 aaKnown RBP15.2■□□□□ 0.02
COL9A3-214ENST00000490398 WDR86Q86TI4 376 aa15.2■□□□□ 0.02
COL9A3-214ENST00000490398 PPP1R14AQ96A00 147 aa15.2■□□□□ 0.02
COL9A3-214ENST00000490398 GABARAPL3Q9BY60 117 aa15.2■□□□□ 0.02
COL9A3-214ENST00000490398 YIPF3Q9GZM5 350 aa15.2■□□□□ 0.02
COL9A3-214ENST00000490398 MMP26Q9NRE1 261 aa15.2■□□□□ 0.02
COL9A3-214ENST00000490398 MRPL15Q9P015 296 aaKnown RBP15.2■□□□□ 0.02
COL9A3-214ENST00000490398 LOC105371242A0A075B767 164 aa15.19■□□□□ 0.02
COL9A3-214ENST00000490398 CEACAM18A8MTB9 384 aa15.19■□□□□ 0.02
COL9A3-214ENST00000490398 TRAPPC2LH3BP13 241 aa15.19■□□□□ 0.02
COL9A3-214ENST00000490398 PHF1O43189 567 aaPredicted RBP15.19■□□□□ 0.02
COL9A3-214ENST00000490398 PTBP3O95758 552 aaKnown RBP15.19■□□□□ 0.02
COL9A3-214ENST00000490398 IFNA2P01563 188 aa15.19■□□□□ 0.02
COL9A3-214ENST00000490398 ACKR3P25106 362 aa15.19■□□□□ 0.02
COL9A3-214ENST00000490398 GSK3AP49840 483 aa15.19■□□□□ 0.02
COL9A3-214ENST00000490398 ZNF181Q2M3W8 571 aa15.19■□□□□ 0.02
COL9A3-214ENST00000490398 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.19■□□□□ 0.02
COL9A3-214ENST00000490398 OR8B12Q8NGG6 310 aa15.19■□□□□ 0.02
COL9A3-214ENST00000490398 UBE2FQ969M7 185 aa15.19■□□□□ 0.02
COL9A3-214ENST00000490398 TMEM246Q9BRR3 403 aa15.19■□□□□ 0.02
COL9A3-214ENST00000490398 ADGRL4Q9HBW9 690 aa15.19■□□□□ 0.02
COL9A3-214ENST00000490398 C3orf80F5H4A9 247 aa15.18■□□□□ 0.02
COL9A3-214ENST00000490398 EBAG9O00559 213 aa15.18■□□□□ 0.02
COL9A3-214ENST00000490398 GMDSO60547 372 aa15.18■□□□□ 0.02
COL9A3-214ENST00000490398 PNPP00491 289 aa15.18■□□□□ 0.02
COL9A3-214ENST00000490398 ANPEPP15144 967 aa15.18■□□□□ 0.02
COL9A3-214ENST00000490398 ADRA2CP18825 462 aa15.18■□□□□ 0.02
COL9A3-214ENST00000490398 SRP14P37108 136 aaKnown RBP15.18■□□□□ 0.02
COL9A3-214ENST00000490398 MDH2P40926 338 aaKnown RBP15.18■□□□□ 0.02
COL9A3-214ENST00000490398 PSMA6P60900 246 aaKnown RBP15.18■□□□□ 0.02
COL9A3-214ENST00000490398 LCN1P1Q5VSP4 162 aa15.18■□□□□ 0.02
COL9A3-214ENST00000490398 NXNL2Q5VZ03 156 aa15.18■□□□□ 0.02
COL9A3-214ENST00000490398 LYPD2Q6UXB3 125 aa15.18■□□□□ 0.02
COL9A3-214ENST00000490398 KRT77Q7Z794 578 aa15.18■□□□□ 0.02
COL9A3-214ENST00000490398 SPICQ8N5J4 248 aa15.18■□□□□ 0.02
COL9A3-214ENST00000490398 CELF2-AS1Q8N7Q2 184 aa15.18■□□□□ 0.02
COL9A3-214ENST00000490398 OR52H1Q8NGJ2 320 aa15.18■□□□□ 0.02
COL9A3-214ENST00000490398 Q8TCH9 128 aa15.18■□□□□ 0.02
COL9A3-214ENST00000490398 FGF23Q9GZV9 251 aaPredicted RBP15.18■□□□□ 0.02
COL9A3-214ENST00000490398 OR10A2Q9H208 303 aa15.18■□□□□ 0.02
COL9A3-214ENST00000490398 OPA3Q9H6K4 179 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms