RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 FAM206AQ9NX38 181 aa9.42□□□□□ -0.9
CPSF7-212ENST00000489728 NUFIP1Q9UHK0 495 aaKnown RBP9.42□□□□□ -0.9
CPSF7-212ENST00000489728 EXOGQ9Y2C4 368 aaKnown RBP9.42□□□□□ -0.9
CPSF7-212ENST00000489728 RPL36Q9Y3U8 105 aaKnown RBP9.42□□□□□ -0.9
CPSF7-212ENST00000489728 CHD3Q12873 2000 aaKnown RBP9.42□□□□□ -0.9
CPSF7-212ENST00000489728 A0A096LNT2 108 aa9.41□□□□□ -0.9
CPSF7-212ENST00000489728 hCG_38984A0A1B0GV85 526 aa9.41□□□□□ -0.9
CPSF7-212ENST00000489728 TMEM269A0A1B0GVZ9 245 aa9.41□□□□□ -0.9
CPSF7-212ENST00000489728 A0A1W2PQL4 384 aaPredicted RBP9.41□□□□□ -0.9
CPSF7-212ENST00000489728 TRIM64A6NGJ6 449 aa9.41□□□□□ -0.9
CPSF7-212ENST00000489728 GGT3PA6NGU5 568 aa9.41□□□□□ -0.9
CPSF7-212ENST00000489728 TRIM64BA6NI03 449 aa9.41□□□□□ -0.9
CPSF7-212ENST00000489728 TPD52L2O43399 206 aaKnown RBP9.41□□□□□ -0.9
CPSF7-212ENST00000489728 TBX1O43435 398 aa9.41□□□□□ -0.9
CPSF7-212ENST00000489728 SPRY3O43610 288 aa9.41□□□□□ -0.9
CPSF7-212ENST00000489728 GMDSO60547 372 aa9.41□□□□□ -0.9
CPSF7-212ENST00000489728 SRSF10O75494 262 aaKnown RBP9.41□□□□□ -0.9
CPSF7-212ENST00000489728 RP2O75695 350 aa9.41□□□□□ -0.9
CPSF7-212ENST00000489728 LY6HO94772 140 aa9.41□□□□□ -0.9
CPSF7-212ENST00000489728 FADS2O95864 444 aaKnown RBP9.41□□□□□ -0.9
CPSF7-212ENST00000489728 INHBBP09529 407 aa9.41□□□□□ -0.9
CPSF7-212ENST00000489728 SLC2A1P11166 492 aa9.41□□□□□ -0.9
CPSF7-212ENST00000489728 SRP9P49458 86 aaKnown RBP9.41□□□□□ -0.9
CPSF7-212ENST00000489728 HCCSP53701 268 aa9.41□□□□□ -0.9
CPSF7-212ENST00000489728 IL5RAQ01344 420 aa9.41□□□□□ -0.9
CPSF7-212ENST00000489728 MZT1Q08AG7 82 aa9.41□□□□□ -0.9
CPSF7-212ENST00000489728 OR8B8Q15620 311 aa9.41□□□□□ -0.9
CPSF7-212ENST00000489728 HFEQ30201 348 aa9.41□□□□□ -0.9
CPSF7-212ENST00000489728 KLHL22Q53GT1 634 aa9.41□□□□□ -0.9
CPSF7-212ENST00000489728 KRT74Q7RTS7 529 aa9.41□□□□□ -0.9
CPSF7-212ENST00000489728 RFLNBQ8N5W9 214 aa9.41□□□□□ -0.9
CPSF7-212ENST00000489728 ACBD7Q8N6N7 88 aa9.41□□□□□ -0.9
CPSF7-212ENST00000489728 CSNK2A3Q8NEV1 391 aa9.41□□□□□ -0.9
CPSF7-212ENST00000489728 OR2Z1Q8NG97 314 aa9.41□□□□□ -0.9
CPSF7-212ENST00000489728 OR10H4Q8NGA5 316 aa9.41□□□□□ -0.9
CPSF7-212ENST00000489728 OR2AE1Q8NHA4 323 aa9.41□□□□□ -0.9
CPSF7-212ENST00000489728 HAVCR2Q8TDQ0 301 aa9.41□□□□□ -0.9
CPSF7-212ENST00000489728 GTF3AQ92664 365 aaKnown RBP9.41□□□□□ -0.9
CPSF7-212ENST00000489728 ERGIC1Q969X5 290 aa9.41□□□□□ -0.9
CPSF7-212ENST00000489728 JAM3Q9BX67 310 aa9.41□□□□□ -0.9
CPSF7-212ENST00000489728 MSL2Q9HCI7 577 aa9.41□□□□□ -0.9
CPSF7-212ENST00000489728 NKX1-2Q9UD57 310 aaPredicted RBP9.41□□□□□ -0.9
CPSF7-212ENST00000489728 MRM2Q9UI43 246 aaKnown RBP9.41□□□□□ -0.9
CPSF7-212ENST00000489728 R4GMQ9 66 aa9.41□□□□□ -0.9
CPSF7-212ENST00000489728 TANC2Q9HCD6 1990 aa9.41□□□□□ -0.9
CPSF7-212ENST00000489728 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.4□□□□□ -0.9
CPSF7-212ENST00000489728 METTL15A6NJ78 407 aa9.4□□□□□ -0.9
CPSF7-212ENST00000489728 PRR32B1ATL7 298 aa9.4□□□□□ -0.9
CPSF7-212ENST00000489728 CLDN25C9JDP6 229 aa9.4□□□□□ -0.9
CPSF7-212ENST00000489728 RNF223E7ERA6 249 aa9.4□□□□□ -0.9
CPSF7-212ENST00000489728 LOC110117498-PIK3R3F6TDL0 507 aa9.4□□□□□ -0.9
CPSF7-212ENST00000489728 IGLV3-1P01715 115 aa9.4□□□□□ -0.9
CPSF7-212ENST00000489728 IGHA1P01876 353 aa9.4□□□□□ -0.9
CPSF7-212ENST00000489728 TACSTD2P09758 323 aa9.4□□□□□ -0.9
CPSF7-212ENST00000489728 USF1P22415 310 aaPredicted RBP9.4□□□□□ -0.9
CPSF7-212ENST00000489728 GATA4P43694 442 aa9.4□□□□□ -0.9
CPSF7-212ENST00000489728 HSPA13P48723 471 aa9.4□□□□□ -0.9
CPSF7-212ENST00000489728 ISL1P61371 349 aa9.4□□□□□ -0.9
CPSF7-212ENST00000489728 FAM3AP98173 230 aa9.4□□□□□ -0.9
CPSF7-212ENST00000489728 MRPL28Q13084 256 aaKnown RBP9.4□□□□□ -0.9
CPSF7-212ENST00000489728 TSTQ16762 297 aaKnown RBP9.4□□□□□ -0.9
CPSF7-212ENST00000489728 CDONQ4KMG0 1287 aa9.4□□□□□ -0.9
CPSF7-212ENST00000489728 ZBTB37Q5TC79 503 aa9.4□□□□□ -0.9
CPSF7-212ENST00000489728 FAM220AQ7Z4H9 259 aa9.4□□□□□ -0.9
CPSF7-212ENST00000489728 C8orf59Q8N0T1 100 aaPredicted RBP9.4□□□□□ -0.9
CPSF7-212ENST00000489728 OR5AS1Q8N127 324 aa9.4□□□□□ -0.9
CPSF7-212ENST00000489728 PLPP7Q8NBV4 271 aa9.4□□□□□ -0.9
CPSF7-212ENST00000489728 BHLHE23Q8NDY6 225 aa9.4□□□□□ -0.9
CPSF7-212ENST00000489728 CCDC54Q8NEL0 328 aa9.4□□□□□ -0.9
CPSF7-212ENST00000489728 OR8B12Q8NGG6 310 aa9.4□□□□□ -0.9
CPSF7-212ENST00000489728 APH1BQ8WW43 257 aa9.4□□□□□ -0.9
CPSF7-212ENST00000489728 TFAP2CQ92754 450 aa9.4□□□□□ -0.9
CPSF7-212ENST00000489728 SGK3Q96BR1 496 aa9.4□□□□□ -0.9
CPSF7-212ENST00000489728 LGALS12Q96DT0 336 aa9.4□□□□□ -0.9
CPSF7-212ENST00000489728 ZNF275Q9NSD4 429 aaPredicted RBP9.4□□□□□ -0.9
CPSF7-212ENST00000489728 SNX5Q9Y5X3 404 aa9.4□□□□□ -0.9
CPSF7-212ENST00000489728 DAPL1A0PJW8 107 aa9.39□□□□□ -0.91
CPSF7-212ENST00000489728 C5orf63A6NC05 138 aa9.39□□□□□ -0.91
CPSF7-212ENST00000489728 DHRS7CA6NNS2 312 aa9.39□□□□□ -0.91
CPSF7-212ENST00000489728 ANKRD30BLA7E2S9 258 aa9.39□□□□□ -0.91
CPSF7-212ENST00000489728 MLNRO43193 412 aa9.39□□□□□ -0.91
CPSF7-212ENST00000489728 WBP4O75554 376 aaKnown RBP9.39□□□□□ -0.91
CPSF7-212ENST00000489728 MTRF1O75570 445 aaKnown RBP9.39□□□□□ -0.91
CPSF7-212ENST00000489728 FSTL3O95633 263 aa9.39□□□□□ -0.91
CPSF7-212ENST00000489728 PTBP3O95758 552 aaKnown RBP9.39□□□□□ -0.91
CPSF7-212ENST00000489728 RPSAP08865 295 aaKnown RBP9.39□□□□□ -0.91
CPSF7-212ENST00000489728 ANOS1P23352 680 aa9.39□□□□□ -0.91
CPSF7-212ENST00000489728 CD200P41217 278 aa9.39□□□□□ -0.91
CPSF7-212ENST00000489728 GPR6P46095 362 aaPredicted RBP9.39□□□□□ -0.91
CPSF7-212ENST00000489728 GSK3AP49840 483 aa9.39□□□□□ -0.91
CPSF7-212ENST00000489728 CHN2P52757 468 aa9.39□□□□□ -0.91
CPSF7-212ENST00000489728 ZNF85Q03923 595 aa9.39□□□□□ -0.91
CPSF7-212ENST00000489728 GALEQ14376 348 aa9.39□□□□□ -0.91
CPSF7-212ENST00000489728 CARTPTQ16568 116 aa9.39□□□□□ -0.91
CPSF7-212ENST00000489728 ZNF181Q2M3W8 571 aa9.39□□□□□ -0.91
CPSF7-212ENST00000489728 BCL2L15Q5TBC7 163 aa9.39□□□□□ -0.91
CPSF7-212ENST00000489728 Q6ZSR3 168 aa9.39□□□□□ -0.91
CPSF7-212ENST00000489728 ZNF771Q7L3S4 317 aaPredicted RBP9.39□□□□□ -0.91
CPSF7-212ENST00000489728 SSX6Q7RTT6 188 aa9.39□□□□□ -0.91
CPSF7-212ENST00000489728 LURAP1LQ8IV03 231 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms