RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 NLRC3Q7RTR2 1065 aa11.59□□□□□ -0.55
SPTLC1-207ENST00000488921 DPY19L4Q7Z388 723 aa11.59□□□□□ -0.55
SPTLC1-207ENST00000488921 KLBQ86Z14 1044 aa11.59□□□□□ -0.55
SPTLC1-207ENST00000488921 BPIFB2Q8N4F0 458 aa11.59□□□□□ -0.55
SPTLC1-207ENST00000488921 IQCF1Q8N6M8 205 aa11.59□□□□□ -0.55
SPTLC1-207ENST00000488921 SPERTQ8NA61 448 aa11.59□□□□□ -0.55
SPTLC1-207ENST00000488921 PLPP7Q8NBV4 271 aa11.59□□□□□ -0.55
SPTLC1-207ENST00000488921 SEMA6DQ8NFY4 1073 aa11.59□□□□□ -0.55
SPTLC1-207ENST00000488921 OR6N2Q8NGY6 317 aa11.59□□□□□ -0.55
SPTLC1-207ENST00000488921 OR2AE1Q8NHA4 323 aa11.59□□□□□ -0.55
SPTLC1-207ENST00000488921 DNAJC9Q8WXX5 260 aa11.59□□□□□ -0.55
SPTLC1-207ENST00000488921 OTULINQ96BN8 352 aa11.59□□□□□ -0.55
SPTLC1-207ENST00000488921 PLEKHA8Q96JA3 519 aa11.59□□□□□ -0.55
SPTLC1-207ENST00000488921 MRI1Q9BV20 369 aa11.59□□□□□ -0.55
SPTLC1-207ENST00000488921 SSBP3Q9BWW4 388 aaPredicted RBP11.59□□□□□ -0.55
SPTLC1-207ENST00000488921 FN3KRPQ9HA64 309 aa11.59□□□□□ -0.55
SPTLC1-207ENST00000488921 PPIAL4AQ9Y536 164 aa11.59□□□□□ -0.55
SPTLC1-207ENST00000488921 FAM183AA6NL82 134 aa11.58□□□□□ -0.56
SPTLC1-207ENST00000488921 PRR23D1E9PI22 279 aaPredicted RBP11.58□□□□□ -0.56
SPTLC1-207ENST00000488921 PRODHO43272 600 aa11.58□□□□□ -0.56
SPTLC1-207ENST00000488921 FSHBP01225 129 aa11.58□□□□□ -0.56
SPTLC1-207ENST00000488921 HMGN1P05114 100 aa11.58□□□□□ -0.56
SPTLC1-207ENST00000488921 ANXA2P07355 339 aaKnown RBP11.58□□□□□ -0.56
SPTLC1-207ENST00000488921 PRR23D2P0DMB1 279 aaPredicted RBP11.58□□□□□ -0.56
SPTLC1-207ENST00000488921 FCGR1AP12314 374 aa11.58□□□□□ -0.56
SPTLC1-207ENST00000488921 OSMP13725 252 aa11.58□□□□□ -0.56
SPTLC1-207ENST00000488921 ZNF12P17014 697 aa11.58□□□□□ -0.56
SPTLC1-207ENST00000488921 CA6P23280 308 aa11.58□□□□□ -0.56
SPTLC1-207ENST00000488921 CFL1P23528 166 aaKnown RBP11.58□□□□□ -0.56
SPTLC1-207ENST00000488921 FPR2P25090 351 aa11.58□□□□□ -0.56
SPTLC1-207ENST00000488921 POU1F1P28069 291 aa11.58□□□□□ -0.56
SPTLC1-207ENST00000488921 DDOSTP39656 456 aa11.58□□□□□ -0.56
SPTLC1-207ENST00000488921 CX3CR1P49238 355 aa11.58□□□□□ -0.56
SPTLC1-207ENST00000488921 HILS1P60008 231 aa11.58□□□□□ -0.56
SPTLC1-207ENST00000488921 SEC61A1P61619 476 aaKnown RBP11.58□□□□□ -0.56
SPTLC1-207ENST00000488921 GNB2P62879 340 aa11.58□□□□□ -0.56
SPTLC1-207ENST00000488921 ZNF154Q13106 437 aa11.58□□□□□ -0.56
SPTLC1-207ENST00000488921 MAB21L1Q13394 359 aa11.58□□□□□ -0.56
SPTLC1-207ENST00000488921 KCNJ8Q15842 424 aa11.58□□□□□ -0.56
SPTLC1-207ENST00000488921 TIGD6Q17RP2 521 aa11.58□□□□□ -0.56
SPTLC1-207ENST00000488921 ZNF404Q494X3 552 aa11.58□□□□□ -0.56
SPTLC1-207ENST00000488921 DEFB108BQ8NET1 73 aa11.58□□□□□ -0.56
SPTLC1-207ENST00000488921 OR8B3Q8NGG8 313 aa11.58□□□□□ -0.56
SPTLC1-207ENST00000488921 OR52H1Q8NGJ2 320 aa11.58□□□□□ -0.56
SPTLC1-207ENST00000488921 RNF133Q8WVZ7 376 aa11.58□□□□□ -0.56
SPTLC1-207ENST00000488921 NEIL1Q96FI4 390 aaPredicted RBP11.58□□□□□ -0.56
SPTLC1-207ENST00000488921 DUS3LQ96G46 650 aaKnown RBP11.58□□□□□ -0.56
SPTLC1-207ENST00000488921 OR8B2Q96RD0 313 aa11.58□□□□□ -0.56
SPTLC1-207ENST00000488921 MED20Q9H944 212 aa11.58□□□□□ -0.56
SPTLC1-207ENST00000488921 MARCH7Q9H992 704 aa11.58□□□□□ -0.56
SPTLC1-207ENST00000488921 TMEM165Q9HC07 324 aa11.58□□□□□ -0.56
SPTLC1-207ENST00000488921 TRIM36Q9NQ86 728 aa11.58□□□□□ -0.56
SPTLC1-207ENST00000488921 DNAJB9Q9UBS3 223 aa11.58□□□□□ -0.56
SPTLC1-207ENST00000488921 OPN4Q9UHM6 478 aa11.58□□□□□ -0.56
SPTLC1-207ENST00000488921 INSIG2Q9Y5U4 225 aa11.58□□□□□ -0.56
SPTLC1-207ENST00000488921 AUP1Q9Y679 476 aa11.58□□□□□ -0.56
SPTLC1-207ENST00000488921 IGHV3-64DA0A0J9YX35 117 aa11.57□□□□□ -0.56
SPTLC1-207ENST00000488921 TRIM77I1YAP6 450 aa11.57□□□□□ -0.56
SPTLC1-207ENST00000488921 TBX1O43435 398 aa11.57□□□□□ -0.56
SPTLC1-207ENST00000488921 FAM20BO75063 409 aa11.57□□□□□ -0.56
SPTLC1-207ENST00000488921 VENTXO95231 258 aa11.57□□□□□ -0.56
SPTLC1-207ENST00000488921 PTBP3O95758 552 aaKnown RBP11.57□□□□□ -0.56
SPTLC1-207ENST00000488921 WNT2P09544 360 aa11.57□□□□□ -0.56
SPTLC1-207ENST00000488921 SLC2A1P11166 492 aa11.57□□□□□ -0.56
SPTLC1-207ENST00000488921 FASP25445 335 aa11.57□□□□□ -0.56
SPTLC1-207ENST00000488921 GINS1Q14691 196 aa11.57□□□□□ -0.56
SPTLC1-207ENST00000488921 SNCBQ16143 134 aa11.57□□□□□ -0.56
SPTLC1-207ENST00000488921 LCE2DQ5TA82 110 aaPredicted RBP11.57□□□□□ -0.56
SPTLC1-207ENST00000488921 BTNL3Q6UXE8 466 aa11.57□□□□□ -0.56
SPTLC1-207ENST00000488921 DCDC5Q6ZRR9 648 aa11.57□□□□□ -0.56
SPTLC1-207ENST00000488921 SPATC1Q76KD6 591 aa11.57□□□□□ -0.56
SPTLC1-207ENST00000488921 TMEM179BQ7Z7N9 219 aa11.57□□□□□ -0.56
SPTLC1-207ENST00000488921 PAPD5Q8NDF8 572 aaKnown RBP11.57□□□□□ -0.56
SPTLC1-207ENST00000488921 OR56B2PQ8NGI1 322 aa11.57□□□□□ -0.56
SPTLC1-207ENST00000488921 PYDC1Q8WXC3 89 aa11.57□□□□□ -0.56
SPTLC1-207ENST00000488921 SPSB4Q96A44 273 aa11.57□□□□□ -0.56
SPTLC1-207ENST00000488921 TMEM246Q9BRR3 403 aa11.57□□□□□ -0.56
SPTLC1-207ENST00000488921 ABHD6Q9BV23 337 aa11.57□□□□□ -0.56
SPTLC1-207ENST00000488921 OR51V1Q9H2C8 321 aa11.57□□□□□ -0.56
SPTLC1-207ENST00000488921 MMP26Q9NRE1 261 aa11.57□□□□□ -0.56
SPTLC1-207ENST00000488921 C14orf119Q9NWQ9 140 aa11.57□□□□□ -0.56
SPTLC1-207ENST00000488921 KIF17Q9P2E2 1029 aa11.57□□□□□ -0.56
SPTLC1-207ENST00000488921 RNF7Q9UBF6 113 aa11.57□□□□□ -0.56
SPTLC1-207ENST00000488921 N6AMT1Q9Y5N5 214 aa11.57□□□□□ -0.56
SPTLC1-207ENST00000488921 ANKRD30BLA7E2S9 258 aa11.56□□□□□ -0.56
SPTLC1-207ENST00000488921 TRAPPC2LH3BP13 241 aa11.56□□□□□ -0.56
SPTLC1-207ENST00000488921 PHYHO14832 338 aa11.56□□□□□ -0.56
SPTLC1-207ENST00000488921 ZNF205O95201 554 aa11.56□□□□□ -0.56
SPTLC1-207ENST00000488921 LYNP07948 512 aa11.56□□□□□ -0.56
SPTLC1-207ENST00000488921 H2BFMP0C1H6 154 aa11.56□□□□□ -0.56
SPTLC1-207ENST00000488921 RBMXP38159 391 aaKnown RBP11.56□□□□□ -0.56
SPTLC1-207ENST00000488921 PMELP40967 661 aa11.56□□□□□ -0.56
SPTLC1-207ENST00000488921 PITPNBP48739 271 aa11.56□□□□□ -0.56
SPTLC1-207ENST00000488921 ELF3P78545 371 aaPredicted RBP11.56□□□□□ -0.56
SPTLC1-207ENST00000488921 SLC35D3Q5M8T2 416 aa11.56□□□□□ -0.56
SPTLC1-207ENST00000488921 PRAMEF6Q5VXH4 476 aa11.56□□□□□ -0.56
SPTLC1-207ENST00000488921 PLBD1Q6P4A8 553 aa11.56□□□□□ -0.56
SPTLC1-207ENST00000488921 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.56□□□□□ -0.56
SPTLC1-207ENST00000488921 TIGD4Q8IY51 512 aa11.56□□□□□ -0.56
SPTLC1-207ENST00000488921 FTMTQ8N4E7 242 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms