RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 SRSF4Q08170 494 aaKnown RBP15.26■□□□□ 0.03
HDAC6-231ENST00000488905 MIDNQ504T8 468 aa15.26■□□□□ 0.03
HDAC6-231ENST00000488905 HSP90B2PQ58FF3 399 aa15.26■□□□□ 0.03
HDAC6-231ENST00000488905 METTL11BQ5VVY1 283 aa15.26■□□□□ 0.03
HDAC6-231ENST00000488905 OLFML2AQ68BL7 652 aa15.26■□□□□ 0.03
HDAC6-231ENST00000488905 PGBD2Q6P3X8 592 aa15.26■□□□□ 0.03
HDAC6-231ENST00000488905 LYPD4Q6UWN0 246 aa15.26■□□□□ 0.03
HDAC6-231ENST00000488905 DRAM2Q6UX65 266 aa15.26■□□□□ 0.03
HDAC6-231ENST00000488905 PNLDC1Q8NA58 520 aaKnown RBP15.26■□□□□ 0.03
HDAC6-231ENST00000488905 CYB561A3Q8NBI2 242 aa15.26■□□□□ 0.03
HDAC6-231ENST00000488905 GNPDA2Q8TDQ7 276 aa15.26■□□□□ 0.03
HDAC6-231ENST00000488905 SSMEM1Q8WWF3 244 aa15.26■□□□□ 0.03
HDAC6-231ENST00000488905 WDFY2Q96P53 400 aa15.26■□□□□ 0.03
HDAC6-231ENST00000488905 COPS4Q9BT78 406 aa15.26■□□□□ 0.03
HDAC6-231ENST00000488905 EGLN3Q9H6Z9 239 aa15.26■□□□□ 0.03
HDAC6-231ENST00000488905 C1orf123Q9NWV4 160 aa15.26■□□□□ 0.03
HDAC6-231ENST00000488905 CDH10Q9Y6N8 788 aa15.26■□□□□ 0.03
HDAC6-231ENST00000488905 COMMD3-BMI1R4GMX3 469 aa15.26■□□□□ 0.03
HDAC6-231ENST00000488905 C5orf63A6NC05 138 aa15.25■□□□□ 0.03
HDAC6-231ENST00000488905 TVP23AA6NH52 213 aa15.25■□□□□ 0.03
HDAC6-231ENST00000488905 A6NLC8 198 aa15.25■□□□□ 0.03
HDAC6-231ENST00000488905 BHLHE40O14503 412 aa15.25■□□□□ 0.03
HDAC6-231ENST00000488905 ARPC2O15144 300 aa15.25■□□□□ 0.03
HDAC6-231ENST00000488905 NDUFA2O43678 99 aa15.25■□□□□ 0.03
HDAC6-231ENST00000488905 HSD17B1P14061 328 aa15.25■□□□□ 0.03
HDAC6-231ENST00000488905 OCLNQ16625 522 aa15.25■□□□□ 0.03
HDAC6-231ENST00000488905 RPL13AP3Q6NVV1 102 aa15.25■□□□□ 0.03
HDAC6-231ENST00000488905 BRICD5Q6PL45 260 aa15.25■□□□□ 0.03
HDAC6-231ENST00000488905 DCXRQ7Z4W1 244 aa15.25■□□□□ 0.03
HDAC6-231ENST00000488905 GCSAMQ8N6F7 178 aa15.25■□□□□ 0.03
HDAC6-231ENST00000488905 SPERTQ8NA61 448 aa15.25■□□□□ 0.03
HDAC6-231ENST00000488905 OR56B2PQ8NGI1 322 aa15.25■□□□□ 0.03
HDAC6-231ENST00000488905 OR4C15Q8NGM1 316 aa15.25■□□□□ 0.03
HDAC6-231ENST00000488905 OR2T4Q8NH00 348 aa15.25■□□□□ 0.03
HDAC6-231ENST00000488905 ZNRF4Q8WWF5 429 aa15.25■□□□□ 0.03
HDAC6-231ENST00000488905 NSMCE2Q96MF7 247 aa15.25■□□□□ 0.03
HDAC6-231ENST00000488905 SIRPDQ9H106 197 aa15.25■□□□□ 0.03
HDAC6-231ENST00000488905 OPA3Q9H6K4 179 aa15.25■□□□□ 0.03
HDAC6-231ENST00000488905 ACOXLQ9NUZ1 547 aa15.25■□□□□ 0.03
HDAC6-231ENST00000488905 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.24■□□□□ 0.03
HDAC6-231ENST00000488905 hCG_1807616A0A1W2PRN6 198 aa15.24■□□□□ 0.03
HDAC6-231ENST00000488905 FCN3O75636 299 aa15.24■□□□□ 0.03
HDAC6-231ENST00000488905 GYPAP02724 150 aa15.24■□□□□ 0.03
HDAC6-231ENST00000488905 RPL15P61313 204 aaKnown RBP15.24■□□□□ 0.03
HDAC6-231ENST00000488905 MZT1Q08AG7 82 aa15.24■□□□□ 0.03
HDAC6-231ENST00000488905 PDCD1Q15116 288 aa15.24■□□□□ 0.03
HDAC6-231ENST00000488905 ZNF826PQ6ZT77 177 aa15.24■□□□□ 0.03
HDAC6-231ENST00000488905 FAM90A1Q86YD7 464 aa15.24■□□□□ 0.03
HDAC6-231ENST00000488905 ZDHHC21Q8IVQ6 265 aa15.24■□□□□ 0.03
HDAC6-231ENST00000488905 LNX2Q8N448 690 aa15.24■□□□□ 0.03
HDAC6-231ENST00000488905 DDOQ99489 341 aa15.24■□□□□ 0.03
HDAC6-231ENST00000488905 CITED1Q99966 193 aa15.24■□□□□ 0.03
HDAC6-231ENST00000488905 TRIM15Q9C019 465 aa15.24■□□□□ 0.03
HDAC6-231ENST00000488905 IL1RAPQ9NPH3 570 aa15.24■□□□□ 0.03
HDAC6-231ENST00000488905 PDP1Q9P0J1 537 aaPredicted RBP15.24■□□□□ 0.03
HDAC6-231ENST00000488905 IGHV1-69DA0A0B4J2H0 117 aa15.23■□□□□ 0.03
HDAC6-231ENST00000488905 CLPSL1A2RUU4 121 aa15.23■□□□□ 0.03
HDAC6-231ENST00000488905 IGHV1-69P01742 117 aa15.23■□□□□ 0.03
HDAC6-231ENST00000488905 GRPP07492 148 aa15.23■□□□□ 0.03
HDAC6-231ENST00000488905 SPARCP09486 303 aa15.23■□□□□ 0.03
HDAC6-231ENST00000488905 SLC2A1P11166 492 aa15.23■□□□□ 0.03
HDAC6-231ENST00000488905 PRKXP51817 358 aa15.23■□□□□ 0.03
HDAC6-231ENST00000488905 OR9Q2Q8NGE9 314 aa15.23■□□□□ 0.03
HDAC6-231ENST00000488905 OR51L1Q8NGJ5 315 aa15.23■□□□□ 0.03
HDAC6-231ENST00000488905 OR9Q1Q8NGQ5 310 aa15.23■□□□□ 0.03
HDAC6-231ENST00000488905 DYRK2Q92630 601 aa15.23■□□□□ 0.03
HDAC6-231ENST00000488905 LHX4Q969G2 390 aa15.23■□□□□ 0.03
HDAC6-231ENST00000488905 SLAMF6Q96DU3 332 aa15.23■□□□□ 0.03
HDAC6-231ENST00000488905 ELAC2Q9BQ52 826 aaKnown RBP15.23■□□□□ 0.03
HDAC6-231ENST00000488905 BTBD10Q9BSF8 475 aa15.23■□□□□ 0.03
HDAC6-231ENST00000488905 RASSF4Q9H2L5 321 aa15.23■□□□□ 0.03
HDAC6-231ENST00000488905 C14orf119Q9NWQ9 140 aa15.23■□□□□ 0.03
HDAC6-231ENST00000488905 ZNF878C9JN71 531 aa15.22■□□□□ 0.03
HDAC6-231ENST00000488905 DVL1O14640 695 aa15.22■□□□□ 0.03
HDAC6-231ENST00000488905 XRCC2O43543 280 aa15.22■□□□□ 0.03
HDAC6-231ENST00000488905 MSX2P35548 267 aaPredicted RBP15.22■□□□□ 0.03
HDAC6-231ENST00000488905 ENTPD1P49961 510 aa15.22■□□□□ 0.03
HDAC6-231ENST00000488905 C11orf91Q3C1V1 193 aa15.22■□□□□ 0.03
HDAC6-231ENST00000488905 SAMD4BQ5PRF9 694 aaKnown RBP15.22■□□□□ 0.03
HDAC6-231ENST00000488905 TEX36Q5VZQ5 186 aa15.22■□□□□ 0.03
HDAC6-231ENST00000488905 BTN2A1Q7KYR7 527 aa15.22■□□□□ 0.03
HDAC6-231ENST00000488905 PGAM4Q8N0Y7 254 aa15.22■□□□□ 0.03
HDAC6-231ENST00000488905 SLC37A3Q8NCC5 494 aa15.22■□□□□ 0.03
HDAC6-231ENST00000488905 OR8D4Q8NGM9 314 aa15.22■□□□□ 0.03
HDAC6-231ENST00000488905 TBC1D15Q8TC07 691 aa15.22■□□□□ 0.03
HDAC6-231ENST00000488905 SPSB4Q96A44 273 aa15.22■□□□□ 0.03
HDAC6-231ENST00000488905 KCNJ15Q99712 375 aa15.22■□□□□ 0.03
HDAC6-231ENST00000488905 MED4Q9NPJ6 270 aa15.22■□□□□ 0.03
HDAC6-231ENST00000488905 TBC1D23Q9NUY8 699 aa15.22■□□□□ 0.03
HDAC6-231ENST00000488905 KAAG1Q9UBP8 84 aa15.22■□□□□ 0.03
HDAC6-231ENST00000488905 CD300AQ9UGN4 299 aa15.22■□□□□ 0.03
HDAC6-231ENST00000488905 LYVE1Q9Y5Y7 322 aa15.22■□□□□ 0.03
HDAC6-231ENST00000488905 IGHV3OR15-7A0A075B7D8 119 aa15.21■□□□□ 0.03
HDAC6-231ENST00000488905 A0A0U1RQK1 487 aa15.21■□□□□ 0.03
HDAC6-231ENST00000488905 M0QZ24 198 aa15.21■□□□□ 0.03
HDAC6-231ENST00000488905 KRT36O76013 467 aa15.21■□□□□ 0.03
HDAC6-231ENST00000488905 ECDO95905 644 aaPredicted RBP15.21■□□□□ 0.03
HDAC6-231ENST00000488905 LHBP01229 141 aa15.21■□□□□ 0.03
HDAC6-231ENST00000488905 IGHV4-59P01825 116 aa15.21■□□□□ 0.03
HDAC6-231ENST00000488905 ARF6P62330 175 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms