RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 C17orf100A8MU93 164 aa13.44□□□□□ -0.26
C9orf3-219ENST00000488186 XPNPEP2O43895 674 aa13.44□□□□□ -0.26
C9orf3-219ENST00000488186 SSX4O60224 188 aa13.44□□□□□ -0.26
C9orf3-219ENST00000488186 NDUFS7O75251 213 aa13.44□□□□□ -0.26
C9orf3-219ENST00000488186 MMP16P51512 607 aa13.44□□□□□ -0.26
C9orf3-219ENST00000488186 TSTQ16762 297 aaKnown RBP13.44□□□□□ -0.26
C9orf3-219ENST00000488186 CDONQ4KMG0 1287 aa13.44□□□□□ -0.26
C9orf3-219ENST00000488186 C6orf141Q5SZD1 244 aa13.44□□□□□ -0.26
C9orf3-219ENST00000488186 SHEQ5VZ18 495 aa13.44□□□□□ -0.26
C9orf3-219ENST00000488186 TMPRSS11AQ6ZMR5 421 aa13.44□□□□□ -0.26
C9orf3-219ENST00000488186 OR8G5Q8NG78 346 aa13.44□□□□□ -0.26
C9orf3-219ENST00000488186 OR13G1Q8NGZ3 307 aa13.44□□□□□ -0.26
C9orf3-219ENST00000488186 SORCS2Q96PQ0 1159 aa13.44□□□□□ -0.26
C9orf3-219ENST00000488186 SIGLEC11Q96RL6 698 aa13.44□□□□□ -0.26
C9orf3-219ENST00000488186 MSL2Q9HCI7 577 aa13.44□□□□□ -0.26
C9orf3-219ENST00000488186 TMEM100Q9NV29 134 aa13.44□□□□□ -0.26
C9orf3-219ENST00000488186 FAM206AQ9NX38 181 aa13.44□□□□□ -0.26
C9orf3-219ENST00000488186 ERVK13-1Q9NX77 482 aa13.44□□□□□ -0.26
C9orf3-219ENST00000488186 CNOT2Q9NZN8 540 aaKnown RBP13.44□□□□□ -0.26
C9orf3-219ENST00000488186 EXOSC1Q9Y3B2 195 aaKnown RBP13.44□□□□□ -0.26
C9orf3-219ENST00000488186 HIVEP1P15822 2718 aa13.43□□□□□ -0.26
C9orf3-219ENST00000488186 F8P00451 2351 aa13.43□□□□□ -0.26
C9orf3-219ENST00000488186 C5orf63A6NC05 138 aa13.43□□□□□ -0.26
C9orf3-219ENST00000488186 CD300LBA8K4G0 201 aa13.43□□□□□ -0.26
C9orf3-219ENST00000488186 IQCF6A8MYZ5 107 aa13.43□□□□□ -0.26
C9orf3-219ENST00000488186 PTGES3LE9PB15 166 aa13.43□□□□□ -0.26
C9orf3-219ENST00000488186 IGHV4-39P01824 125 aa13.43□□□□□ -0.26
C9orf3-219ENST00000488186 IGHA1P01876 353 aa13.43□□□□□ -0.26
C9orf3-219ENST00000488186 DDOSTP39656 456 aa13.43□□□□□ -0.26
C9orf3-219ENST00000488186 PSMB10P40306 273 aa13.43□□□□□ -0.26
C9orf3-219ENST00000488186 MMP15P51511 669 aa13.43□□□□□ -0.26
C9orf3-219ENST00000488186 PRSS12P56730 875 aa13.43□□□□□ -0.26
C9orf3-219ENST00000488186 OR12D2P58182 307 aa13.43□□□□□ -0.26
C9orf3-219ENST00000488186 CCL8P80075 99 aa13.43□□□□□ -0.26
C9orf3-219ENST00000488186 ST3GAL4Q11206 333 aa13.43□□□□□ -0.26
C9orf3-219ENST00000488186 CARTPTQ16568 116 aa13.43□□□□□ -0.26
C9orf3-219ENST00000488186 Q5PR19 223 aa13.43□□□□□ -0.26
C9orf3-219ENST00000488186 PRSS45Q7RTY3 260 aa13.43□□□□□ -0.26
C9orf3-219ENST00000488186 OR2Z1Q8NG97 314 aa13.43□□□□□ -0.26
C9orf3-219ENST00000488186 OR8B12Q8NGG6 310 aa13.43□□□□□ -0.26
C9orf3-219ENST00000488186 FBLIM1Q8WUP2 373 aa13.43□□□□□ -0.26
C9orf3-219ENST00000488186 SPSB4Q96A44 273 aa13.43□□□□□ -0.26
C9orf3-219ENST00000488186 C4orf36Q96KX1 117 aa13.43□□□□□ -0.26
C9orf3-219ENST00000488186 EGLN1Q9GZT9 426 aa13.43□□□□□ -0.26
C9orf3-219ENST00000488186 PLCXD1Q9NUJ7 323 aa13.43□□□□□ -0.26
C9orf3-219ENST00000488186 PSORS1C1Q9UIG5 152 aa13.43□□□□□ -0.26
C9orf3-219ENST00000488186 DIMT1Q9UNQ2 313 aaKnown RBP13.43□□□□□ -0.26
C9orf3-219ENST00000488186 NOP16Q9Y3C1 178 aaKnown RBP13.43□□□□□ -0.26
C9orf3-219ENST00000488186 TPRKBQ9Y3C4 175 aa13.43□□□□□ -0.26
C9orf3-219ENST00000488186 MED13LQ71F56 2210 aa13.42□□□□□ -0.26
C9orf3-219ENST00000488186 ANKRD30BLA7E2S9 258 aa13.42□□□□□ -0.26
C9orf3-219ENST00000488186 HTR1AP08908 422 aa13.42□□□□□ -0.26
C9orf3-219ENST00000488186 PIPP12273 146 aaPredicted RBP13.42□□□□□ -0.26
C9orf3-219ENST00000488186 GBX2P52951 348 aaPredicted RBP13.42□□□□□ -0.26
C9orf3-219ENST00000488186 MFGE8Q08431 387 aaPredicted RBP13.42□□□□□ -0.26
C9orf3-219ENST00000488186 ZNF684Q5T5D7 378 aa13.42□□□□□ -0.26
C9orf3-219ENST00000488186 AHSA2Q719I0 299 aa13.42□□□□□ -0.26
C9orf3-219ENST00000488186 SYS1Q8N2H4 156 aa13.42□□□□□ -0.26
C9orf3-219ENST00000488186 FTMTQ8N4E7 242 aa13.42□□□□□ -0.26
C9orf3-219ENST00000488186 KLHL36Q8N4N3 616 aa13.42□□□□□ -0.26
C9orf3-219ENST00000488186 OR51E1Q8TCB6 317 aa13.42□□□□□ -0.26
C9orf3-219ENST00000488186 GTF3AQ92664 365 aaKnown RBP13.42□□□□□ -0.26
C9orf3-219ENST00000488186 MYDGFQ969H8 173 aa13.42□□□□□ -0.26
C9orf3-219ENST00000488186 SLC22A4Q9H015 551 aa13.42□□□□□ -0.26
C9orf3-219ENST00000488186 ACOXLQ9NUZ1 547 aa13.42□□□□□ -0.26
C9orf3-219ENST00000488186 ZNF319Q9P2F9 582 aa13.42□□□□□ -0.26
C9orf3-219ENST00000488186 NUFIP1Q9UHK0 495 aaKnown RBP13.42□□□□□ -0.26
C9orf3-219ENST00000488186 A0A0U1RQV5 110 aa13.41□□□□□ -0.26
C9orf3-219ENST00000488186 SLC1A7O00341 560 aa13.41□□□□□ -0.26
C9orf3-219ENST00000488186 MTRF1O75570 445 aaKnown RBP13.41□□□□□ -0.26
C9orf3-219ENST00000488186 PNPP00491 289 aa13.41□□□□□ -0.26
C9orf3-219ENST00000488186 IGHV1-46P01743 117 aa13.41□□□□□ -0.26
C9orf3-219ENST00000488186 DAOP14920 347 aa13.41□□□□□ -0.26
C9orf3-219ENST00000488186 GNALP38405 381 aa13.41□□□□□ -0.26
C9orf3-219ENST00000488186 MAGEB1P43366 347 aa13.41□□□□□ -0.26
C9orf3-219ENST00000488186 MAP2K3P46734 347 aa13.41□□□□□ -0.26
C9orf3-219ENST00000488186 GSK3AP49840 483 aa13.41□□□□□ -0.26
C9orf3-219ENST00000488186 DSCR9P59020 149 aa13.41□□□□□ -0.26
C9orf3-219ENST00000488186 TNFAIP6P98066 277 aaPredicted RBP13.41□□□□□ -0.26
C9orf3-219ENST00000488186 FAM3AP98173 230 aa13.41□□□□□ -0.26
C9orf3-219ENST00000488186 MRPL28Q13084 256 aaKnown RBP13.41□□□□□ -0.26
C9orf3-219ENST00000488186 CLEC12BQ2HXU8 276 aa13.41□□□□□ -0.26
C9orf3-219ENST00000488186 ODF4Q2M2E3 257 aa13.41□□□□□ -0.26
C9orf3-219ENST00000488186 TMEM255AQ5JRV8 349 aa13.41□□□□□ -0.26
C9orf3-219ENST00000488186 FAM209AQ5JX71 171 aa13.41□□□□□ -0.26
C9orf3-219ENST00000488186 CLEC2AQ6UVW9 174 aa13.41□□□□□ -0.26
C9orf3-219ENST00000488186 CATSPERDQ86XM0 798 aa13.41□□□□□ -0.26
C9orf3-219ENST00000488186 EGFL6Q8IUX8 553 aa13.41□□□□□ -0.26
C9orf3-219ENST00000488186 ELMOD2Q8IZ81 293 aa13.41□□□□□ -0.26
C9orf3-219ENST00000488186 CSNK2A3Q8NEV1 391 aa13.41□□□□□ -0.26
C9orf3-219ENST00000488186 OR56B2PQ8NGI1 322 aa13.41□□□□□ -0.26
C9orf3-219ENST00000488186 UBASH3BQ8TF42 649 aa13.41□□□□□ -0.26
C9orf3-219ENST00000488186 RORBQ92753 470 aa13.41□□□□□ -0.26
C9orf3-219ENST00000488186 PPP1R14AQ96A00 147 aa13.41□□□□□ -0.26
C9orf3-219ENST00000488186 ELMOD3Q96FG2 381 aa13.41□□□□□ -0.26
C9orf3-219ENST00000488186 FAM71F1Q96KD3 344 aaPredicted RBP13.41□□□□□ -0.26
C9orf3-219ENST00000488186 RHNO1Q9BSD3 238 aa13.41□□□□□ -0.26
C9orf3-219ENST00000488186 SAP30LQ9HAJ7 183 aa13.41□□□□□ -0.26
C9orf3-219ENST00000488186 MYOZ1Q9NP98 299 aaPredicted RBP13.41□□□□□ -0.26
C9orf3-219ENST00000488186 GPR84Q9NQS5 396 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms