RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 RBMS3Q6XE24 437 aaKnown RBP16.12■□□□□ 0.17
CD55-209ENST00000488171 NLRC3Q7RTR2 1065 aa16.12■□□□□ 0.17
CD55-209ENST00000488171 CCDC124Q96CT7 223 aaKnown RBP16.12■□□□□ 0.17
CD55-209ENST00000488171 C1orf147Q96MC9 270 aaPredicted RBP16.12■□□□□ 0.17
CD55-209ENST00000488171 MED20Q9H944 212 aa16.12■□□□□ 0.17
CD55-209ENST00000488171 FN3KRPQ9HA64 309 aa16.12■□□□□ 0.17
CD55-209ENST00000488171 TAS2R1Q9NYW7 299 aa16.12■□□□□ 0.17
CD55-209ENST00000488171 KIR2DS1A0A191URI9 304 aa16.11■□□□□ 0.17
CD55-209ENST00000488171 ZNF3P17036 446 aa16.11■□□□□ 0.17
CD55-209ENST00000488171 PSMB10P40306 273 aa16.11■□□□□ 0.17
CD55-209ENST00000488171 BLVRAP53004 296 aa16.11■□□□□ 0.17
CD55-209ENST00000488171 GK3PQ14409 553 aa16.11■□□□□ 0.17
CD55-209ENST00000488171 WDR25Q64LD2 544 aaPredicted RBP16.11■□□□□ 0.17
CD55-209ENST00000488171 SPATC1Q76KD6 591 aa16.11■□□□□ 0.17
CD55-209ENST00000488171 ADGRG5Q8IZF4 528 aa16.11■□□□□ 0.17
CD55-209ENST00000488171 PARP8Q8N3A8 854 aa16.11■□□□□ 0.17
CD55-209ENST00000488171 IQCF1Q8N6M8 205 aa16.11■□□□□ 0.17
CD55-209ENST00000488171 C3orf56Q8N813 242 aa16.11■□□□□ 0.17
CD55-209ENST00000488171 PLPP7Q8NBV4 271 aa16.11■□□□□ 0.17
CD55-209ENST00000488171 OR56B2PQ8NGI1 322 aa16.11■□□□□ 0.17
CD55-209ENST00000488171 SPSB4Q96A44 273 aa16.11■□□□□ 0.17
CD55-209ENST00000488171 UPRTQ96BW1 309 aa16.11■□□□□ 0.17
CD55-209ENST00000488171 FEVQ99581 238 aa16.11■□□□□ 0.17
CD55-209ENST00000488171 CHID1Q9BWS9 393 aa16.11■□□□□ 0.17
CD55-209ENST00000488171 C1orf21Q9H246 121 aa16.11■□□□□ 0.17
CD55-209ENST00000488171 RNF7Q9UBF6 113 aa16.11■□□□□ 0.17
CD55-209ENST00000488171 CLN8Q9UBY8 286 aa16.11■□□□□ 0.17
CD55-209ENST00000488171 N6AMT1Q9Y5N5 214 aa16.11■□□□□ 0.17
CD55-209ENST00000488171 IGHV3OR16-10A0A075B7F0 116 aa16.1■□□□□ 0.17
CD55-209ENST00000488171 DNAJC9-AS1A6NH13 148 aa16.1■□□□□ 0.17
CD55-209ENST00000488171 FAM183AA6NL82 134 aa16.1■□□□□ 0.17
CD55-209ENST00000488171 PHYHO14832 338 aa16.1■□□□□ 0.17
CD55-209ENST00000488171 PLATP00750 562 aa16.1■□□□□ 0.17
CD55-209ENST00000488171 GRK5P34947 590 aa16.1■□□□□ 0.17
CD55-209ENST00000488171 EIF2B1Q14232 305 aaKnown RBP16.1■□□□□ 0.17
CD55-209ENST00000488171 DPY19L4Q7Z388 723 aa16.1■□□□□ 0.17
CD55-209ENST00000488171 TEX47Q8TBZ9 253 aa16.1■□□□□ 0.17
CD55-209ENST00000488171 GIPC3Q8TF64 312 aa16.1■□□□□ 0.17
CD55-209ENST00000488171 LRGUKQ96M69 825 aa16.1■□□□□ 0.17
CD55-209ENST00000488171 DUX5Q96PT3 197 aa16.1■□□□□ 0.17
CD55-209ENST00000488171 NUDT16L1Q9BRJ7 211 aaKnown RBP16.1■□□□□ 0.17
CD55-209ENST00000488171 OPA3Q9H6K4 179 aa16.1■□□□□ 0.17
CD55-209ENST00000488171 CTSZQ9UBR2 303 aa16.1■□□□□ 0.17
CD55-209ENST00000488171 SOX21Q9Y651 276 aaPredicted RBP16.1■□□□□ 0.17
CD55-209ENST00000488171 ARRDC5A6NEK1 342 aa16.09■□□□□ 0.17
CD55-209ENST00000488171 XRCC2O43543 280 aa16.09■□□□□ 0.17
CD55-209ENST00000488171 CST1P01037 141 aa16.09■□□□□ 0.17
CD55-209ENST00000488171 PRTN3P24158 256 aa16.09■□□□□ 0.17
CD55-209ENST00000488171 CX3CR1P49238 355 aa16.09■□□□□ 0.17
CD55-209ENST00000488171 GRB2P62993 217 aaKnown RBP16.09■□□□□ 0.17
CD55-209ENST00000488171 AWAT1Q58HT5 328 aa16.09■□□□□ 0.17
CD55-209ENST00000488171 SFRP4Q6FHJ7 346 aaPredicted RBP16.09■□□□□ 0.17
CD55-209ENST00000488171 C9orf139Q6ZV77 190 aa16.09■□□□□ 0.17
CD55-209ENST00000488171 PRSS45Q7RTY3 260 aa16.09■□□□□ 0.17
CD55-209ENST00000488171 TMEM179BQ7Z7N9 219 aa16.09■□□□□ 0.17
CD55-209ENST00000488171 RNF133Q8WVZ7 376 aa16.09■□□□□ 0.17
CD55-209ENST00000488171 INTS14Q96SY0 518 aa16.09■□□□□ 0.17
CD55-209ENST00000488171 AMELYQ99218 206 aa16.09■□□□□ 0.17
CD55-209ENST00000488171 ABHD6Q9BV23 337 aa16.09■□□□□ 0.17
CD55-209ENST00000488171 MS4A7Q9GZW8 240 aaPredicted RBP16.09■□□□□ 0.17
CD55-209ENST00000488171 MARCH7Q9H992 704 aa16.09■□□□□ 0.17
CD55-209ENST00000488171 TRAV40A0A0B4J280 105 aa16.08■□□□□ 0.16
CD55-209ENST00000488171 C22orf46C9J442 243 aa16.08■□□□□ 0.16
CD55-209ENST00000488171 H3BN98 237 aa16.08■□□□□ 0.16
CD55-209ENST00000488171 LGALS8O00214 317 aa16.08■□□□□ 0.16
CD55-209ENST00000488171 TNFRSF13BO14836 293 aaPredicted RBP16.08■□□□□ 0.16
CD55-209ENST00000488171 HKR1P10072 659 aa16.08■□□□□ 0.16
CD55-209ENST00000488171 SLC15A1P46059 708 aa16.08■□□□□ 0.16
CD55-209ENST00000488171 BAMBIQ13145 260 aa16.08■□□□□ 0.16
CD55-209ENST00000488171 DOCK11Q5JSL3 2073 aa16.08■□□□□ 0.16
CD55-209ENST00000488171 ZNF826PQ6ZT77 177 aa16.08■□□□□ 0.16
CD55-209ENST00000488171 SLC16A9Q7RTY1 509 aa16.08■□□□□ 0.16
CD55-209ENST00000488171 ERI1Q8IV48 349 aaKnown RBP16.08■□□□□ 0.16
CD55-209ENST00000488171 TIGD4Q8IY51 512 aa16.08■□□□□ 0.16
CD55-209ENST00000488171 BOLLQ8N9W6 283 aaKnown RBP16.08■□□□□ 0.16
CD55-209ENST00000488171 SPERTQ8NA61 448 aa16.08■□□□□ 0.16
CD55-209ENST00000488171 OR6N2Q8NGY6 317 aa16.08■□□□□ 0.16
CD55-209ENST00000488171 CANT1Q8WVQ1 401 aa16.08■□□□□ 0.16
CD55-209ENST00000488171 THTPAQ9BU02 230 aa16.08■□□□□ 0.16
CD55-209ENST00000488171 TOR3AQ9H497 397 aa16.08■□□□□ 0.16
CD55-209ENST00000488171 C1orf123Q9NWV4 160 aa16.08■□□□□ 0.16
CD55-209ENST00000488171 C3orf80F5H4A9 247 aa16.07■□□□□ 0.16
CD55-209ENST00000488171 TBX1O43435 398 aa16.07■□□□□ 0.16
CD55-209ENST00000488171 GLCEO94923 617 aa16.07■□□□□ 0.16
CD55-209ENST00000488171 ANXA2P07355 339 aaKnown RBP16.07■□□□□ 0.16
CD55-209ENST00000488171 GRPP07492 148 aa16.07■□□□□ 0.16
CD55-209ENST00000488171 GSTT1P30711 240 aa16.07■□□□□ 0.16
CD55-209ENST00000488171 FAM3AP98173 230 aa16.07■□□□□ 0.16
CD55-209ENST00000488171 SGK3Q96BR1 496 aa16.07■□□□□ 0.16
CD55-209ENST00000488171 MMADHCQ9H3L0 296 aaPredicted RBP16.07■□□□□ 0.16
CD55-209ENST00000488171 ZMAT3Q9HA38 289 aaKnown RBP16.07■□□□□ 0.16
CD55-209ENST00000488171 NBEAL1Q6ZS30 2694 aa16.07■□□□□ 0.16
CD55-209ENST00000488171 AQP12BA6NM10 295 aa16.06■□□□□ 0.16
CD55-209ENST00000488171 HSD11B1P28845 292 aa16.06■□□□□ 0.16
CD55-209ENST00000488171 DDOSTP39656 456 aa16.06■□□□□ 0.16
CD55-209ENST00000488171 OPRL1P41146 370 aa16.06■□□□□ 0.16
CD55-209ENST00000488171 NPY4RP50391 375 aa16.06■□□□□ 0.16
CD55-209ENST00000488171 FGF12P61328 243 aa16.06■□□□□ 0.16
CD55-209ENST00000488171 OR8B8Q15620 311 aa16.06■□□□□ 0.16
CD55-209ENST00000488171 KCNJ8Q15842 424 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms