RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 OR56B2PQ8NGI1 322 aa17.17■□□□□ 0.34
HDAC4-209ENST00000487617 OTOSQ8NHW6 89 aa17.17■□□□□ 0.34
HDAC4-209ENST00000487617 SPATA3Q8NHX4 192 aa17.17■□□□□ 0.34
HDAC4-209ENST00000487617 TMPRSS13Q9BYE2 586 aa17.17■□□□□ 0.34
HDAC4-209ENST00000487617 MRPL15Q9P015 296 aaKnown RBP17.17■□□□□ 0.34
HDAC4-209ENST00000487617 SVEP1Q4LDE5 3571 aa17.16■□□□□ 0.34
HDAC4-209ENST00000487617 LOC105371242A0A075B767 164 aa17.16■□□□□ 0.34
HDAC4-209ENST00000487617 GMDSO60547 372 aa17.16■□□□□ 0.34
HDAC4-209ENST00000487617 CIB2O75838 187 aa17.16■□□□□ 0.34
HDAC4-209ENST00000487617 AVPP01185 164 aa17.16■□□□□ 0.34
HDAC4-209ENST00000487617 LYNP07948 512 aa17.16■□□□□ 0.34
HDAC4-209ENST00000487617 SLC2A5P22732 501 aa17.16■□□□□ 0.34
HDAC4-209ENST00000487617 GATA3P23771 443 aa17.16■□□□□ 0.34
HDAC4-209ENST00000487617 APOFQ13790 326 aa17.16■□□□□ 0.34
HDAC4-209ENST00000487617 PTGES3Q15185 160 aaKnown RBP17.16■□□□□ 0.34
HDAC4-209ENST00000487617 PRAMEF6Q5VXH4 476 aa17.16■□□□□ 0.34
HDAC4-209ENST00000487617 C1orf229Q6ZS94 237 aaPredicted RBP17.16■□□□□ 0.34
HDAC4-209ENST00000487617 AMIGO2Q86SJ2 522 aa17.16■□□□□ 0.34
HDAC4-209ENST00000487617 PHC2Q8IXK0 858 aa17.16■□□□□ 0.34
HDAC4-209ENST00000487617 RFLNBQ8N5W9 214 aa17.16■□□□□ 0.34
HDAC4-209ENST00000487617 OR11L1Q8NGX0 322 aa17.16■□□□□ 0.34
HDAC4-209ENST00000487617 ERGIC1Q969X5 290 aa17.16■□□□□ 0.34
HDAC4-209ENST00000487617 SPSB4Q96A44 273 aa17.16■□□□□ 0.34
HDAC4-209ENST00000487617 BRD7Q9NPI1 651 aa17.16■□□□□ 0.34
HDAC4-209ENST00000487617 KRT84Q9NSB2 600 aa17.16■□□□□ 0.34
HDAC4-209ENST00000487617 UFSP2Q9NUQ7 469 aa17.16■□□□□ 0.34
HDAC4-209ENST00000487617 CUBNO60494 3623 aa17.16■□□□□ 0.34
HDAC4-209ENST00000487617 COL6A5A8TX70 2615 aa17.16■□□□□ 0.34
HDAC4-209ENST00000487617 CEACAM18A8MTB9 384 aa17.15■□□□□ 0.34
HDAC4-209ENST00000487617 F5H0A9 414 aaPredicted RBP17.15■□□□□ 0.34
HDAC4-209ENST00000487617 MITFO75030 526 aaPredicted RBP17.15■□□□□ 0.34
HDAC4-209ENST00000487617 FAM20BO75063 409 aa17.15■□□□□ 0.34
HDAC4-209ENST00000487617 SEC61A1P61619 476 aaKnown RBP17.15■□□□□ 0.34
HDAC4-209ENST00000487617 ESRRGP62508 458 aa17.15■□□□□ 0.34
HDAC4-209ENST00000487617 MPPED2Q15777 294 aa17.15■□□□□ 0.34
HDAC4-209ENST00000487617 KRTAP24-1Q3LI83 254 aa17.15■□□□□ 0.34
HDAC4-209ENST00000487617 FAM201AQ5SY85 155 aa17.15■□□□□ 0.34
HDAC4-209ENST00000487617 LIPNQ5VXI9 398 aa17.15■□□□□ 0.34
HDAC4-209ENST00000487617 PRSS45Q7RTY3 260 aa17.15■□□□□ 0.34
HDAC4-209ENST00000487617 ZDHHC13Q8IUH4 622 aa17.15■□□□□ 0.34
HDAC4-209ENST00000487617 OR52H1Q8NGJ2 320 aa17.15■□□□□ 0.34
HDAC4-209ENST00000487617 Q8TCH9 128 aa17.15■□□□□ 0.34
HDAC4-209ENST00000487617 DVL3Q92997 716 aaPredicted RBP17.15■□□□□ 0.34
HDAC4-209ENST00000487617 SGK3Q96BR1 496 aa17.15■□□□□ 0.34
HDAC4-209ENST00000487617 DUS3LQ96G46 650 aaKnown RBP17.15■□□□□ 0.34
HDAC4-209ENST00000487617 REEP6Q96HR9 211 aa17.15■□□□□ 0.34
HDAC4-209ENST00000487617 OR10A2Q9H208 303 aa17.15■□□□□ 0.34
HDAC4-209ENST00000487617 OCEL1Q9H607 264 aa17.15■□□□□ 0.34
HDAC4-209ENST00000487617 C7orf69Q9H7B7 122 aa17.15■□□□□ 0.34
HDAC4-209ENST00000487617 FN3KRPQ9HA64 309 aa17.15■□□□□ 0.34
HDAC4-209ENST00000487617 TMEM165Q9HC07 324 aa17.15■□□□□ 0.34
HDAC4-209ENST00000487617 PPIAL4EA0A075B759 164 aa17.14■□□□□ 0.33
HDAC4-209ENST00000487617 PPIAL4DF5H284 164 aa17.14■□□□□ 0.33
HDAC4-209ENST00000487617 TCF21O43680 179 aa17.14■□□□□ 0.33
HDAC4-209ENST00000487617 PPIAL4FP0DN26 164 aa17.14■□□□□ 0.33
HDAC4-209ENST00000487617 FCGR1AP12314 374 aa17.14■□□□□ 0.33
HDAC4-209ENST00000487617 DDOSTP39656 456 aa17.14■□□□□ 0.33
HDAC4-209ENST00000487617 FAM3AP98173 230 aa17.14■□□□□ 0.33
HDAC4-209ENST00000487617 SCGB2A2Q13296 93 aa17.14■□□□□ 0.33
HDAC4-209ENST00000487617 GFOD2Q3B7J2 385 aa17.14■□□□□ 0.33
HDAC4-209ENST00000487617 ESCO2Q56NI9 601 aa17.14■□□□□ 0.33
HDAC4-209ENST00000487617 SLC16A9Q7RTY1 509 aa17.14■□□□□ 0.33
HDAC4-209ENST00000487617 SPERTQ8NA61 448 aa17.14■□□□□ 0.33
HDAC4-209ENST00000487617 LRTOMTQ8WZ04 291 aa17.14■□□□□ 0.33
HDAC4-209ENST00000487617 PGAM5Q96HS1 289 aa17.14■□□□□ 0.33
HDAC4-209ENST00000487617 PRRG3Q9BZD7 231 aa17.14■□□□□ 0.33
HDAC4-209ENST00000487617 LAMP5Q9UJQ1 280 aa17.14■□□□□ 0.33
HDAC4-209ENST00000487617 KLHDC2Q9Y2U9 406 aa17.14■□□□□ 0.33
HDAC4-209ENST00000487617 PPIAL4AQ9Y536 164 aa17.14■□□□□ 0.33
HDAC4-209ENST00000487617 PPIAL4CA0A0B4J2A2 164 aa17.13■□□□□ 0.33
HDAC4-209ENST00000487617 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.13■□□□□ 0.33
HDAC4-209ENST00000487617 ANKRD30BLA7E2S9 258 aa17.13■□□□□ 0.33
HDAC4-209ENST00000487617 PRKYO43930 277 aa17.13■□□□□ 0.33
HDAC4-209ENST00000487617 WNT2P09544 360 aa17.13■□□□□ 0.33
HDAC4-209ENST00000487617 RPS2P15880 293 aaKnown RBP17.13■□□□□ 0.33
HDAC4-209ENST00000487617 CFL1P23528 166 aaKnown RBP17.13■□□□□ 0.33
HDAC4-209ENST00000487617 LCN1P1Q5VSP4 162 aa17.13■□□□□ 0.33
HDAC4-209ENST00000487617 LRRN1Q6UXK5 716 aa17.13■□□□□ 0.33
HDAC4-209ENST00000487617 C1QL2Q7Z5L3 287 aa17.13■□□□□ 0.33
HDAC4-209ENST00000487617 KLBQ86Z14 1044 aa17.13■□□□□ 0.33
HDAC4-209ENST00000487617 TEAD3Q99594 435 aa17.13■□□□□ 0.33
HDAC4-209ENST00000487617 TMEM246Q9BRR3 403 aa17.13■□□□□ 0.33
HDAC4-209ENST00000487617 ZNF319Q9P2F9 582 aa17.13■□□□□ 0.33
HDAC4-209ENST00000487617 MIOXQ9UGB7 285 aa17.13■□□□□ 0.33
HDAC4-209ENST00000487617 hCG_38984A0A1B0GV85 526 aa17.12■□□□□ 0.33
HDAC4-209ENST00000487617 CCDC182A6NF36 153 aa17.12■□□□□ 0.33
HDAC4-209ENST00000487617 A8MXK9 166 aa17.12■□□□□ 0.33
HDAC4-209ENST00000487617 FSTL3O95633 263 aa17.12■□□□□ 0.33
HDAC4-209ENST00000487617 GRPP07492 148 aa17.12■□□□□ 0.33
HDAC4-209ENST00000487617 MRPL3P09001 348 aaKnown RBP17.12■□□□□ 0.33
HDAC4-209ENST00000487617 ADRA2CP18825 462 aa17.12■□□□□ 0.33
HDAC4-209ENST00000487617 ALOX5APP20292 161 aa17.12■□□□□ 0.33
HDAC4-209ENST00000487617 HCCSP53701 268 aa17.12■□□□□ 0.33
HDAC4-209ENST00000487617 MZT1Q08AG7 82 aa17.12■□□□□ 0.33
HDAC4-209ENST00000487617 ZNF404Q494X3 552 aa17.12■□□□□ 0.33
HDAC4-209ENST00000487617 KDM4DQ6B0I6 523 aa17.12■□□□□ 0.33
HDAC4-209ENST00000487617 PLPP7Q8NBV4 271 aa17.12■□□□□ 0.33
HDAC4-209ENST00000487617 NANPQ8TBE9 248 aa17.12■□□□□ 0.33
HDAC4-209ENST00000487617 YIPF3Q9GZM5 350 aa17.12■□□□□ 0.33
HDAC4-209ENST00000487617 GABARAPL1Q9H0R8 117 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms