RNA–Protein interactions for RNA: ENST00000487169.5

HDLBP-241, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 4,339 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-241ENST00000487169 SLC39A9Q9NUM3 307 aa12.02□□□□□ -0.48
HDLBP-241ENST00000487169 NOTCH3Q9UM47 2321 aa12.02□□□□□ -0.49
HDLBP-241ENST00000487169 SERTM1A2A2V5 107 aa12.02□□□□□ -0.49
HDLBP-241ENST00000487169 ZNF891A8MT65 544 aaPredicted RBP12.02□□□□□ -0.49
HDLBP-241ENST00000487169 ST8SIA3O43173 380 aa12.02□□□□□ -0.49
HDLBP-241ENST00000487169 SNRNP70P08621 437 aaKnown RBP12.02□□□□□ -0.49
HDLBP-241ENST00000487169 S100A11P31949 105 aa12.02□□□□□ -0.49
HDLBP-241ENST00000487169 SPATA46Q5T0L3 261 aa12.02□□□□□ -0.49
HDLBP-241ENST00000487169 OR6K3Q8NGY3 331 aa12.02□□□□□ -0.49
HDLBP-241ENST00000487169 DDOQ99489 341 aa12.02□□□□□ -0.49
HDLBP-241ENST00000487169 ZNF2Q9BSG1 426 aaPredicted RBP12.02□□□□□ -0.49
HDLBP-241ENST00000487169 SLC23A1Q9UHI7 598 aa12.02□□□□□ -0.49
HDLBP-241ENST00000487169 A0A1W2PPH5 198 aa12.02□□□□□ -0.49
HDLBP-241ENST00000487169 SULT1C2O00338 296 aa12.02□□□□□ -0.49
HDLBP-241ENST00000487169 ZIC1Q15915 447 aa12.02□□□□□ -0.49
HDLBP-241ENST00000487169 ZNF766Q5HY98 468 aa12.02□□□□□ -0.49
HDLBP-241ENST00000487169 C12orf73Q69YU5 71 aa12.02□□□□□ -0.49
HDLBP-241ENST00000487169 BRICD5Q6PL45 260 aa12.02□□□□□ -0.49
HDLBP-241ENST00000487169 ST3GAL6Q9Y274 331 aa12.02□□□□□ -0.49
HDLBP-241ENST00000487169 PATE3B3GLJ2 98 aa12.01□□□□□ -0.49
HDLBP-241ENST00000487169 LGALS8O00214 317 aa12.01□□□□□ -0.49
HDLBP-241ENST00000487169 TNFSF14O43557 240 aa12.01□□□□□ -0.49
HDLBP-241ENST00000487169 NXPH3O95157 252 aa12.01□□□□□ -0.49
HDLBP-241ENST00000487169 BTG1P62324 171 aa12.01□□□□□ -0.49
HDLBP-241ENST00000487169 SSPNQ14714 243 aa12.01□□□□□ -0.49
HDLBP-241ENST00000487169 ZDHHC23Q8IYP9 409 aa12.01□□□□□ -0.49
HDLBP-241ENST00000487169 C1orf87Q8N0U7 546 aa12.01□□□□□ -0.49
HDLBP-241ENST00000487169 NOXO1Q8NFA2 376 aa12.01□□□□□ -0.49
HDLBP-241ENST00000487169 SHARPINQ9H0F6 387 aa12.01□□□□□ -0.49
HDLBP-241ENST00000487169 LHX9Q9NQ69 397 aa12.01□□□□□ -0.49
HDLBP-241ENST00000487169 FLVCR1Q9Y5Y0 555 aa12.01□□□□□ -0.49
HDLBP-241ENST00000487169 A0A1B0GTQ1 180 aa12.01□□□□□ -0.49
HDLBP-241ENST00000487169 TMEM200CA6NKL6 621 aa12.01□□□□□ -0.49
HDLBP-241ENST00000487169 M0R296 226 aa12.01□□□□□ -0.49
HDLBP-241ENST00000487169 IMPA2O14732 288 aa12.01□□□□□ -0.49
HDLBP-241ENST00000487169 ANGPTL7O43827 346 aa12.01□□□□□ -0.49
HDLBP-241ENST00000487169 EPXP11678 715 aa12.01□□□□□ -0.49
HDLBP-241ENST00000487169 MGMTP16455 207 aa12.01□□□□□ -0.49
HDLBP-241ENST00000487169 HMGA2P52926 109 aa12.01□□□□□ -0.49
HDLBP-241ENST00000487169 RAB11AP62491 216 aa12.01□□□□□ -0.49
HDLBP-241ENST00000487169 MC2RQ01718 297 aa12.01□□□□□ -0.49
HDLBP-241ENST00000487169 FZD5Q13467 585 aa12.01□□□□□ -0.49
HDLBP-241ENST00000487169 CD276Q5ZPR3 534 aa12.01□□□□□ -0.49
HDLBP-241ENST00000487169 DTWD2Q8NBA8 298 aa12.01□□□□□ -0.49
HDLBP-241ENST00000487169 OR1J1Q8NGS3 322 aa12.01□□□□□ -0.49
HDLBP-241ENST00000487169 RIMS4Q9H426 269 aaPredicted RBP12.01□□□□□ -0.49
HDLBP-241ENST00000487169 COLQQ9Y215 455 aaPredicted RBP12.01□□□□□ -0.49
HDLBP-241ENST00000487169 MYOFQ9NZM1 2061 aa12.01□□□□□ -0.49
HDLBP-241ENST00000487169 SMLR1H3BR10 107 aa12.01□□□□□ -0.49
HDLBP-241ENST00000487169 NKX2-1P43699 371 aaPredicted RBP12.01□□□□□ -0.49
HDLBP-241ENST00000487169 PCBP3P57721 371 aaKnown RBP12.01□□□□□ -0.49
HDLBP-241ENST00000487169 ZNF266Q14584 549 aa12.01□□□□□ -0.49
HDLBP-241ENST00000487169 PRAMEF5Q5TYX0 476 aa12.01□□□□□ -0.49
HDLBP-241ENST00000487169 PRAMEF6Q5VXH4 476 aa12.01□□□□□ -0.49
HDLBP-241ENST00000487169 OR8G2PQ6IF36 304 aa12.01□□□□□ -0.49
HDLBP-241ENST00000487169 FAAP20Q6NZ36 180 aa12.01□□□□□ -0.49
HDLBP-241ENST00000487169 SLC51BQ86UW2 128 aa12.01□□□□□ -0.49
HDLBP-241ENST00000487169 BIN3Q9NQY0 253 aa12.01□□□□□ -0.49
HDLBP-241ENST00000487169 ICMTO60725 284 aa12□□□□□ -0.49
HDLBP-241ENST00000487169 OR5H8P0DN80 308 aa12□□□□□ -0.49
HDLBP-241ENST00000487169 TIAL1Q01085 375 aaKnown RBP eCLIP12□□□□□ -0.494e-7■■□□□ 11.9
HDLBP-241ENST00000487169 BAXQ07812 192 aa12□□□□□ -0.49
HDLBP-241ENST00000487169 OR2A2Q6IF42 318 aa12□□□□□ -0.49
HDLBP-241ENST00000487169 THSD4Q6ZMP0 1018 aa12□□□□□ -0.49
HDLBP-241ENST00000487169 LHFPL2Q6ZUX7 228 aa12□□□□□ -0.49
HDLBP-241ENST00000487169 OR2Y1Q8NGV0 311 aa12□□□□□ -0.49
HDLBP-241ENST00000487169 HAS2Q92819 552 aa12□□□□□ -0.49
HDLBP-241ENST00000487169 OR6C68A6NDL8 312 aa12□□□□□ -0.49
HDLBP-241ENST00000487169 TOX3O15405 576 aaPredicted RBP12□□□□□ -0.49
HDLBP-241ENST00000487169 CNIH1O95406 144 aa12□□□□□ -0.49
HDLBP-241ENST00000487169 CD3DP04234 171 aa12□□□□□ -0.49
HDLBP-241ENST00000487169 CDC20Q12834 499 aa12□□□□□ -0.49
HDLBP-241ENST00000487169 ASAH1Q13510 395 aa12□□□□□ -0.49
HDLBP-241ENST00000487169 CPEB4Q17RY0 729 aaKnown RBP eCLIP12□□□□□ -0.49
HDLBP-241ENST00000487169 PP6455Q8WZ26 134 aa12□□□□□ -0.49
HDLBP-241ENST00000487169 FYTTD1Q96QD9 318 aaKnown RBP12□□□□□ -0.49
HDLBP-241ENST00000487169 LRP12Q9Y561 859 aa12□□□□□ -0.49
HDLBP-241ENST00000487169 CCDC88CQ9P219 2028 aa12□□□□□ -0.49
HDLBP-241ENST00000487169 ZNF816-ZNF321PA0A0X1KG74 233 aa12□□□□□ -0.49
HDLBP-241ENST00000487169 APOA2P02652 100 aa12□□□□□ -0.49
HDLBP-241ENST00000487169 DUSP1P28562 367 aa12□□□□□ -0.49
HDLBP-241ENST00000487169 FAM185AQ8N0U4 392 aa12□□□□□ -0.49
HDLBP-241ENST00000487169 GALNT16Q8N428 558 aa12□□□□□ -0.49
HDLBP-241ENST00000487169 APOBEC3DQ96AK3 386 aaPredicted RBP12□□□□□ -0.49
HDLBP-241ENST00000487169 PELI1Q96FA3 418 aa12□□□□□ -0.49
HDLBP-241ENST00000487169 PTDSS2Q9BVG9 487 aa12□□□□□ -0.49
HDLBP-241ENST00000487169 POFUT1Q9H488 388 aa12□□□□□ -0.49
HDLBP-241ENST00000487169 RER1O15258 196 aa12□□□□□ -0.49
HDLBP-241ENST00000487169 OR2B11Q5JQS5 317 aa12□□□□□ -0.49
HDLBP-241ENST00000487169 H2BFWTQ7Z2G1 175 aa12□□□□□ -0.49
HDLBP-241ENST00000487169 RBMXL3Q8N7X1 1067 aaKnown RBP12□□□□□ -0.49
HDLBP-241ENST00000487169 DAZAP1Q96EP5 407 aaKnown RBP12□□□□□ -0.49
HDLBP-241ENST00000487169 ARPC5LQ9BPX5 153 aa12□□□□□ -0.49
HDLBP-241ENST00000487169 OCIAD1Q9NX40 245 aa12□□□□□ -0.49
HDLBP-241ENST00000487169 HBE1P02100 147 aa11.99□□□□□ -0.49
HDLBP-241ENST00000487169 SPNP16150 400 aa11.99□□□□□ -0.49
HDLBP-241ENST00000487169 RAC1P63000 192 aa11.99□□□□□ -0.49
HDLBP-241ENST00000487169 HTD2P86397 168 aa11.99□□□□□ -0.49
HDLBP-241ENST00000487169 CDK5Q00535 292 aa11.99□□□□□ -0.49
HDLBP-241ENST00000487169 EIF4EBP2Q13542 120 aaPredicted RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms