RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 ZFAND2BQ8WV99 257 aa5.89□□□□□ -1.47
VPS50-218ENST00000485994 ITLN1Q8WWA0 313 aa5.89□□□□□ -1.47
VPS50-218ENST00000485994 GAL3ST1Q99999 423 aa5.89□□□□□ -1.47
VPS50-218ENST00000485994 TEX12Q9BXU0 123 aa5.89□□□□□ -1.47
VPS50-218ENST00000485994 TMPRSS13Q9BYE2 586 aa5.89□□□□□ -1.47
VPS50-218ENST00000485994 FN3KQ9H479 309 aa5.89□□□□□ -1.47
VPS50-218ENST00000485994 NIPAL2Q9H841 368 aa5.89□□□□□ -1.47
VPS50-218ENST00000485994 MRPL15Q9P015 296 aaKnown RBP5.89□□□□□ -1.47
VPS50-218ENST00000485994 MIOXQ9UGB7 285 aa5.89□□□□□ -1.47
VPS50-218ENST00000485994 ZNF391Q9UJN7 358 aa5.89□□□□□ -1.47
VPS50-218ENST00000485994 A0A0G2JMP0 313 aa5.88□□□□□ -1.47
VPS50-218ENST00000485994 A0A0X1KG70 313 aa5.88□□□□□ -1.47
VPS50-218ENST00000485994 LRRC30A6NM36 301 aa5.88□□□□□ -1.47
VPS50-218ENST00000485994 H0YL77 283 aa5.88□□□□□ -1.47
VPS50-218ENST00000485994 FAM229AH3BQW9 127 aa5.88□□□□□ -1.47
VPS50-218ENST00000485994 TNFRSF13BO14836 293 aaPredicted RBP5.88□□□□□ -1.47
VPS50-218ENST00000485994 PHF1O43189 567 aaPredicted RBP5.88□□□□□ -1.47
VPS50-218ENST00000485994 NDUFA2O43678 99 aa5.88□□□□□ -1.47
VPS50-218ENST00000485994 FSHBP01225 129 aa5.88□□□□□ -1.47
VPS50-218ENST00000485994 GYPBP06028 91 aa5.88□□□□□ -1.47
VPS50-218ENST00000485994 SBK2P0C263 348 aa5.88□□□□□ -1.47
VPS50-218ENST00000485994 PSKH1P11801 424 aa5.88□□□□□ -1.47
VPS50-218ENST00000485994 ADRA2CP18825 462 aa5.88□□□□□ -1.47
VPS50-218ENST00000485994 ALOX5APP20292 161 aa5.88□□□□□ -1.47
VPS50-218ENST00000485994 SLC2A5P22732 501 aa5.88□□□□□ -1.47
VPS50-218ENST00000485994 ZFP36P26651 326 aaKnown RBP5.88□□□□□ -1.47
VPS50-218ENST00000485994 GSTT1P30711 240 aa5.88□□□□□ -1.47
VPS50-218ENST00000485994 DCTDP32321 178 aa5.88□□□□□ -1.47
VPS50-218ENST00000485994 SRP14P37108 136 aaKnown RBP5.88□□□□□ -1.47
VPS50-218ENST00000485994 PMELP40967 661 aa5.88□□□□□ -1.47
VPS50-218ENST00000485994 OPRL1P41146 370 aa5.88□□□□□ -1.47
VPS50-218ENST00000485994 RPS27P42677 84 aaKnown RBP5.88□□□□□ -1.47
VPS50-218ENST00000485994 DAPP51397 102 aa5.88□□□□□ -1.47
VPS50-218ENST00000485994 CRISP1P54107 249 aa5.88□□□□□ -1.47
VPS50-218ENST00000485994 BTG1P62324 171 aa5.88□□□□□ -1.47
VPS50-218ENST00000485994 PAX2Q02962 417 aa5.88□□□□□ -1.47
VPS50-218ENST00000485994 ZNF92Q03936 586 aa5.88□□□□□ -1.47
VPS50-218ENST00000485994 DBPQ10586 325 aaPredicted RBP5.88□□□□□ -1.47
VPS50-218ENST00000485994 ZMYND11Q15326 602 aa5.88□□□□□ -1.47
VPS50-218ENST00000485994 ATP6AP1Q15904 470 aa5.88□□□□□ -1.47
VPS50-218ENST00000485994 SNCBQ16143 134 aa5.88□□□□□ -1.47
VPS50-218ENST00000485994 KDM4DQ6B0I6 523 aa5.88□□□□□ -1.47
VPS50-218ENST00000485994 FAHD2BQ6P2I3 314 aaPredicted RBP5.88□□□□□ -1.47
VPS50-218ENST00000485994 C1QL2Q7Z5L3 287 aa5.88□□□□□ -1.47
VPS50-218ENST00000485994 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.88□□□□□ -1.47
VPS50-218ENST00000485994 OR5AS1Q8N127 324 aa5.88□□□□□ -1.47
VPS50-218ENST00000485994 OR4M2Q8NGB6 313 aa5.88□□□□□ -1.47
VPS50-218ENST00000485994 OR51L1Q8NGJ5 315 aa5.88□□□□□ -1.47
VPS50-218ENST00000485994 OTOSQ8NHW6 89 aa5.88□□□□□ -1.47
VPS50-218ENST00000485994 FAHD2AQ96GK7 314 aa5.88□□□□□ -1.47
VPS50-218ENST00000485994 DMRTB1Q96MA1 342 aa5.88□□□□□ -1.47
VPS50-218ENST00000485994 INTS14Q96SY0 518 aa5.88□□□□□ -1.47
VPS50-218ENST00000485994 TEAD3Q99594 435 aa5.88□□□□□ -1.47
VPS50-218ENST00000485994 COPS4Q9BT78 406 aa5.88□□□□□ -1.47
VPS50-218ENST00000485994 ABHD6Q9BV23 337 aa5.88□□□□□ -1.47
VPS50-218ENST00000485994 OSBPL10Q9BXB5 764 aa5.88□□□□□ -1.47
VPS50-218ENST00000485994 YIPF3Q9GZM5 350 aa5.88□□□□□ -1.47
VPS50-218ENST00000485994 RGCCQ9H4X1 137 aa5.88□□□□□ -1.47
VPS50-218ENST00000485994 TRIM36Q9NQ86 728 aa5.88□□□□□ -1.47
VPS50-218ENST00000485994 PCDHB10Q9UN67 800 aa5.88□□□□□ -1.47
VPS50-218ENST00000485994 LRCH1Q9Y2L9 728 aa5.88□□□□□ -1.47
VPS50-218ENST00000485994 FAM183AA6NL82 134 aa5.87□□□□□ -1.47
VPS50-218ENST00000485994 RNF212BA8MTL3 300 aa5.87□□□□□ -1.47
VPS50-218ENST00000485994 F5H5P2 479 aa5.87□□□□□ -1.47
VPS50-218ENST00000485994 TRAPPC2LH3BP13 241 aa5.87□□□□□ -1.47
VPS50-218ENST00000485994 TCF21O43680 179 aa5.87□□□□□ -1.47
VPS50-218ENST00000485994 E2F6O75461 281 aa5.87□□□□□ -1.47
VPS50-218ENST00000485994 LHBP01229 141 aa5.87□□□□□ -1.47
VPS50-218ENST00000485994 LYNP07948 512 aa5.87□□□□□ -1.47
VPS50-218ENST00000485994 SPARCP09486 303 aa5.87□□□□□ -1.47
VPS50-218ENST00000485994 ZNF12P17014 697 aa5.87□□□□□ -1.47
VPS50-218ENST00000485994 FASP25445 335 aa5.87□□□□□ -1.47
VPS50-218ENST00000485994 PSMB10P40306 273 aa5.87□□□□□ -1.47
VPS50-218ENST00000485994 NPY4RP50391 375 aa5.87□□□□□ -1.47
VPS50-218ENST00000485994 PRKXP51817 358 aa5.87□□□□□ -1.47
VPS50-218ENST00000485994 FAM3AP98173 230 aa5.87□□□□□ -1.47
VPS50-218ENST00000485994 PAX8Q06710 450 aa5.87□□□□□ -1.47
VPS50-218ENST00000485994 EIF2B1Q14232 305 aaKnown RBP5.87□□□□□ -1.47
VPS50-218ENST00000485994 PTGES3Q15185 160 aaKnown RBP5.87□□□□□ -1.47
VPS50-218ENST00000485994 TAF13Q15543 124 aa5.87□□□□□ -1.47
VPS50-218ENST00000485994 SNAI3Q3KNW1 292 aa5.87□□□□□ -1.47
VPS50-218ENST00000485994 ZNF404Q494X3 552 aa5.87□□□□□ -1.47
VPS50-218ENST00000485994 FAM76BQ5HYJ3 339 aa5.87□□□□□ -1.47
VPS50-218ENST00000485994 DCAF12L2Q5VW00 463 aa5.87□□□□□ -1.47
VPS50-218ENST00000485994 ASRGL1Q7L266 308 aa5.87□□□□□ -1.47
VPS50-218ENST00000485994 MRPL21Q7Z2W9 205 aaKnown RBP5.87□□□□□ -1.47
VPS50-218ENST00000485994 ERI1Q8IV48 349 aaKnown RBP5.87□□□□□ -1.47
VPS50-218ENST00000485994 CPOQ8IVL8 374 aa5.87□□□□□ -1.47
VPS50-218ENST00000485994 HS3ST5Q8IZT8 346 aa5.87□□□□□ -1.47
VPS50-218ENST00000485994 CSNK2A3Q8NEV1 391 aa5.87□□□□□ -1.47
VPS50-218ENST00000485994 OR6K6Q8NGW6 343 aa5.87□□□□□ -1.47
VPS50-218ENST00000485994 NANPQ8TBE9 248 aa5.87□□□□□ -1.47
VPS50-218ENST00000485994 SPRYD4Q8WW59 207 aaPredicted RBP5.87□□□□□ -1.47
VPS50-218ENST00000485994 DACT3Q96B18 629 aaPredicted RBP5.87□□□□□ -1.47
VPS50-218ENST00000485994 SGK3Q96BR1 496 aa5.87□□□□□ -1.47
VPS50-218ENST00000485994 MNTQ99583 582 aa5.87□□□□□ -1.47
VPS50-218ENST00000485994 OR51V1Q9H2C8 321 aa5.87□□□□□ -1.47
VPS50-218ENST00000485994 NARFLQ9H6Q4 476 aa5.87□□□□□ -1.47
VPS50-218ENST00000485994 RNPEPL1Q9HAU8 725 aa5.87□□□□□ -1.47
VPS50-218ENST00000485994 CENPMQ9NSP4 180 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms