RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 APOBEC4Q8WW27 367 aaKnown RBP3.54□□□□□ -1.84
PRPF38B-205ENST00000485810 GEMIN6Q8WXD5 167 aaKnown RBP3.54□□□□□ -1.84
PRPF38B-205ENST00000485810 MARC2Q969Z3 335 aa3.54□□□□□ -1.84
PRPF38B-205ENST00000485810 ISOC2Q96AB3 205 aa3.54□□□□□ -1.84
PRPF38B-205ENST00000485810 PDXPQ96GD0 296 aa3.54□□□□□ -1.84
PRPF38B-205ENST00000485810 ZC3HAV1LQ96H79 300 aaKnown RBP3.54□□□□□ -1.84
PRPF38B-205ENST00000485810 SGK494Q96LW2 274 aa3.54□□□□□ -1.84
PRPF38B-205ENST00000485810 RNF2Q99496 336 aa3.54□□□□□ -1.84
PRPF38B-205ENST00000485810 VKORC1Q9BQB6 163 aa3.54□□□□□ -1.84
PRPF38B-205ENST00000485810 C2orf88Q9BSF0 95 aa3.54□□□□□ -1.84
PRPF38B-205ENST00000485810 EFCAB11Q9BUY7 163 aa3.54□□□□□ -1.84
PRPF38B-205ENST00000485810 BEX2Q9BXY8 128 aa3.54□□□□□ -1.84
PRPF38B-205ENST00000485810 BARHL1Q9BZE3 327 aa3.54□□□□□ -1.84
PRPF38B-205ENST00000485810 CSTL1Q9H114 145 aa3.54□□□□□ -1.84
PRPF38B-205ENST00000485810 KLK15Q9H2R5 256 aa3.54□□□□□ -1.84
PRPF38B-205ENST00000485810 OR51M1Q9H341 326 aa3.54□□□□□ -1.84
PRPF38B-205ENST00000485810 REEP4Q9H6H4 257 aa3.54□□□□□ -1.84
PRPF38B-205ENST00000485810 DNAJC4Q9NNZ3 241 aa3.54□□□□□ -1.84
PRPF38B-205ENST00000485810 CYSLTR2Q9NS75 346 aa3.54□□□□□ -1.84
PRPF38B-205ENST00000485810 ACSS1Q9NUB1 689 aaPredicted RBP3.54□□□□□ -1.84
PRPF38B-205ENST00000485810 MRPS18AQ9NVS2 196 aaKnown RBP3.54□□□□□ -1.84
PRPF38B-205ENST00000485810 ZNF226Q9NYT6 803 aa3.54□□□□□ -1.84
PRPF38B-205ENST00000485810 GNG12Q9UBI6 72 aa3.54□□□□□ -1.84
PRPF38B-205ENST00000485810 SEC14L4Q9UDX3 406 aa3.54□□□□□ -1.84
PRPF38B-205ENST00000485810 KLHL21Q9UJP4 597 aa3.54□□□□□ -1.84
PRPF38B-205ENST00000485810 LSM7Q9UK45 103 aaKnown RBP3.54□□□□□ -1.84
PRPF38B-205ENST00000485810 OR52A1Q9UKL2 312 aa3.54□□□□□ -1.84
PRPF38B-205ENST00000485810 FZD4Q9ULV1 537 aa3.54□□□□□ -1.84
PRPF38B-205ENST00000485810 FARSAQ9Y285 508 aaKnown RBP3.54□□□□□ -1.84
PRPF38B-205ENST00000485810 PIKFYVEQ9Y2I7 2098 aa3.54□□□□□ -1.84
PRPF38B-205ENST00000485810 PLXNB3Q9ULL4 1909 aa3.54□□□□□ -1.84
PRPF38B-205ENST00000485810 IQCMA0A1B0GVH7 501 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 A0A1B0GVI7 797 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 A0A1W2PR80 420 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 PRSS37A4D1T9 235 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 CCDC182A6NF36 153 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 SHISA7A6NL88 538 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 DISC1C4P0D8 188 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 E7EQ34 232 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 CASKO14936 926 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 C1QL1O75973 258 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 KCNK2O95069 426 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 NDUFA7O95182 113 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 IFNA10P01566 189 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 IFNW1P05000 195 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 FBP1P09467 338 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 HLA-EP13747 358 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 MYOGP15173 224 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 HLA-GP17693 338 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 RAB3AP20336 220 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 FCARP24071 287 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 GADD45AP24522 165 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 IMPA1P29218 277 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 GKP32189 559 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 CD70P32970 193 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 TIMP3P35625 211 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 GPR1P46091 355 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 TMEM33P57088 247 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 CLDN2P57739 230 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 DEFA1P59665 94 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 DEFA3P59666 94 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 CDC42P60953 191 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 ERVK11-1P61568 191 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 RBX1P62877 108 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 CFHR1Q03591 330 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 ZNF763Q0D2J5 394 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 ST3GAL3Q11203 375 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 BAMBIQ13145 260 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 GAB1Q13480 694 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 MELKQ14680 651 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 MAPK14Q16539 360 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 DEFB115Q30KQ5 88 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 PGGHGQ32M88 737 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 LINC01620Q4KN68 170 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 TMEM236Q5W0B7 351 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 FAM71E1Q6IPT2 247 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 FAM166AQ6J272 317 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 MED27Q6P2C8 311 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 TRIM40Q6P9F5 258 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 QSOX2Q6ZRP7 698 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 MEPCEQ7L2J0 689 aaKnown RBP3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 GDPD3Q7L5L3 318 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 FAM220AQ7Z4H9 259 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 TMPRSS11BQ86T26 416 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 APRG1Q8IVJ8 170 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 SLC22A15Q8IZD6 547 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 TDHQ8IZJ6 230 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 CLECL1Q8IZS7 167 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 LGI3Q8N145 548 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 SLC39A11Q8N1S5 342 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 LINC00471Q8N535 108 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 PARP16Q8N5Y8 322 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 LFNGQ8NES3 379 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 OR5AU1Q8NGC0 362 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 OR6K2Q8NGY2 324 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 OR52I2Q8NH67 350 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 MRPS31Q92665 395 aaKnown RBP3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 FGF11Q92914 225 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 UBE2E3Q969T4 207 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms