RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 DIRAS1O95057 198 aa5.2□□□□□ -1.58
PTCD3-215ENST00000484203 APOL3O95236 402 aa5.2□□□□□ -1.58
PTCD3-215ENST00000484203 RAP2AP10114 183 aa5.2□□□□□ -1.58
PTCD3-215ENST00000484203 IRF2P14316 349 aa5.2□□□□□ -1.58
PTCD3-215ENST00000484203 ZNF3P17036 446 aa5.2□□□□□ -1.58
PTCD3-215ENST00000484203 FMO3P31513 532 aa5.2□□□□□ -1.58
PTCD3-215ENST00000484203 IL2RGP31785 369 aa5.2□□□□□ -1.58
PTCD3-215ENST00000484203 DDOSTP39656 456 aa5.2□□□□□ -1.58
PTCD3-215ENST00000484203 SLC25A1P53007 311 aa5.2□□□□□ -1.58
PTCD3-215ENST00000484203 FXYD6P3P58550 94 aa5.2□□□□□ -1.58
PTCD3-215ENST00000484203 BTG1P62324 171 aa5.2□□□□□ -1.58
PTCD3-215ENST00000484203 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.2□□□□□ -1.58
PTCD3-215ENST00000484203 MICAQ29983 383 aa5.2□□□□□ -1.58
PTCD3-215ENST00000484203 DNAL1Q4LDG9 190 aa5.2□□□□□ -1.58
PTCD3-215ENST00000484203 CCDC92Q53HC0 331 aaPredicted RBP5.2□□□□□ -1.58
PTCD3-215ENST00000484203 OR2T5Q6IEZ7 315 aa5.2□□□□□ -1.58
PTCD3-215ENST00000484203 DRAM2Q6UX65 266 aa5.2□□□□□ -1.58
PTCD3-215ENST00000484203 RBMS3Q6XE24 437 aaKnown RBP5.2□□□□□ -1.58
PTCD3-215ENST00000484203 RINLQ6ZS11 566 aa5.2□□□□□ -1.58
PTCD3-215ENST00000484203 PTCHD4Q6ZW05 846 aa5.2□□□□□ -1.58
PTCD3-215ENST00000484203 PGAP1Q75T13 922 aa5.2□□□□□ -1.58
PTCD3-215ENST00000484203 LRRC28Q86X40 367 aaPredicted RBP5.2□□□□□ -1.58
PTCD3-215ENST00000484203 MEX3DQ86XN8 651 aaKnown RBP5.2□□□□□ -1.58
PTCD3-215ENST00000484203 AQP12AQ8IXF9 295 aa5.2□□□□□ -1.58
PTCD3-215ENST00000484203 LNX2Q8N448 690 aa5.2□□□□□ -1.58
PTCD3-215ENST00000484203 FTMTQ8N4E7 242 aa5.2□□□□□ -1.58
PTCD3-215ENST00000484203 ATG16L2Q8NAA4 619 aa5.2□□□□□ -1.58
PTCD3-215ENST00000484203 OR52E2Q8NGJ4 325 aa5.2□□□□□ -1.58
PTCD3-215ENST00000484203 OR11L1Q8NGX0 322 aa5.2□□□□□ -1.58
PTCD3-215ENST00000484203 OR2T29Q8NH02 315 aa5.2□□□□□ -1.58
PTCD3-215ENST00000484203 OR4K13Q8NH42 304 aa5.2□□□□□ -1.58
PTCD3-215ENST00000484203 CHAC2Q8WUX2 184 aa5.2□□□□□ -1.58
PTCD3-215ENST00000484203 SPRYD4Q8WW59 207 aaPredicted RBP5.2□□□□□ -1.58
PTCD3-215ENST00000484203 DNAJC9Q8WXX5 260 aa5.2□□□□□ -1.58
PTCD3-215ENST00000484203 GPA33Q99795 319 aa5.2□□□□□ -1.58
PTCD3-215ENST00000484203 SLC30A2Q9BRI3 323 aa5.2□□□□□ -1.58
PTCD3-215ENST00000484203 SOX7Q9BT81 388 aa5.2□□□□□ -1.58
PTCD3-215ENST00000484203 DGCR6LQ9BY27 220 aa5.2□□□□□ -1.58
PTCD3-215ENST00000484203 TOR3AQ9H497 397 aa5.2□□□□□ -1.58
PTCD3-215ENST00000484203 NARFLQ9H6Q4 476 aa5.2□□□□□ -1.58
PTCD3-215ENST00000484203 METTL17Q9H7H0 456 aaPredicted RBP5.2□□□□□ -1.58
PTCD3-215ENST00000484203 ZNF556Q9HAH1 456 aa5.2□□□□□ -1.58
PTCD3-215ENST00000484203 NTN4Q9HB63 628 aa5.2□□□□□ -1.58
PTCD3-215ENST00000484203 MSL2Q9HCI7 577 aa5.2□□□□□ -1.58
PTCD3-215ENST00000484203 DDX28Q9NUL7 540 aaKnown RBP5.2□□□□□ -1.58
PTCD3-215ENST00000484203 TBC1D23Q9NUY8 699 aa5.2□□□□□ -1.58
PTCD3-215ENST00000484203 MIOXQ9UGB7 285 aa5.2□□□□□ -1.58
PTCD3-215ENST00000484203 LRCH1Q9Y2L9 728 aa5.2□□□□□ -1.58
PTCD3-215ENST00000484203 SAMHD1Q9Y3Z3 626 aaKnown RBP5.2□□□□□ -1.58
PTCD3-215ENST00000484203 LYVE1Q9Y5Y7 322 aa5.2□□□□□ -1.58
PTCD3-215ENST00000484203 LHFPL6Q9Y693 200 aa5.2□□□□□ -1.58
PTCD3-215ENST00000484203 A0A1B0GWJ7 208 aa5.19□□□□□ -1.58
PTCD3-215ENST00000484203 OR6C68A6NDL8 312 aa5.19□□□□□ -1.58
PTCD3-215ENST00000484203 FAM157AC9JC47 383 aa5.19□□□□□ -1.58
PTCD3-215ENST00000484203 F5H5K5 113 aa5.19□□□□□ -1.58
PTCD3-215ENST00000484203 TMEM178BH3BS89 294 aa5.19□□□□□ -1.58
PTCD3-215ENST00000484203 TRIM77I1YAP6 450 aa5.19□□□□□ -1.58
PTCD3-215ENST00000484203 M0R135 149 aa5.19□□□□□ -1.58
PTCD3-215ENST00000484203 BHLHE40O14503 412 aa5.19□□□□□ -1.58
PTCD3-215ENST00000484203 GNGT2O14610 69 aa5.19□□□□□ -1.58
PTCD3-215ENST00000484203 NDUFA2O43678 99 aa5.19□□□□□ -1.58
PTCD3-215ENST00000484203 IGHV2-70P01814 119 aa5.19□□□□□ -1.58
PTCD3-215ENST00000484203 LCATP04180 440 aa5.19□□□□□ -1.58
PTCD3-215ENST00000484203 HMGN1P05114 100 aa5.19□□□□□ -1.58
PTCD3-215ENST00000484203 SBK2P0C263 348 aa5.19□□□□□ -1.58
PTCD3-215ENST00000484203 ACSM4P0C7M7 580 aa5.19□□□□□ -1.58
PTCD3-215ENST00000484203 PPIAL4GP0DN37 164 aa5.19□□□□□ -1.58
PTCD3-215ENST00000484203 ADRA2CP18825 462 aa5.19□□□□□ -1.58
PTCD3-215ENST00000484203 GGT2P36268 569 aa5.19□□□□□ -1.58
PTCD3-215ENST00000484203 RASSF2P50749 326 aa5.19□□□□□ -1.58
PTCD3-215ENST00000484203 BPIFB3P59826 476 aa5.19□□□□□ -1.58
PTCD3-215ENST00000484203 GRB2P62993 217 aaKnown RBP5.19□□□□□ -1.58
PTCD3-215ENST00000484203 TAF13Q15543 124 aa5.19□□□□□ -1.58
PTCD3-215ENST00000484203 KRTAP27-1Q3LI81 207 aa5.19□□□□□ -1.58
PTCD3-215ENST00000484203 ESCO2Q56NI9 601 aa5.19□□□□□ -1.58
PTCD3-215ENST00000484203 TEX30Q5JUR7 227 aa5.19□□□□□ -1.58
PTCD3-215ENST00000484203 CLEC12AQ5QGZ9 265 aa5.19□□□□□ -1.58
PTCD3-215ENST00000484203 AVPI1Q5T686 147 aa5.19□□□□□ -1.58
PTCD3-215ENST00000484203 TMEM200BQ69YZ2 307 aa5.19□□□□□ -1.58
PTCD3-215ENST00000484203 ZNF770Q6IQ21 691 aaPredicted RBP5.19□□□□□ -1.58
PTCD3-215ENST00000484203 SLC18B1Q6NT16 456 aa5.19□□□□□ -1.58
PTCD3-215ENST00000484203 BTNL3Q6UXE8 466 aa5.19□□□□□ -1.58
PTCD3-215ENST00000484203 LRRN1Q6UXK5 716 aa5.19□□□□□ -1.58
PTCD3-215ENST00000484203 SHFQ7M4L6 423 aa5.19□□□□□ -1.58
PTCD3-215ENST00000484203 MRPL21Q7Z2W9 205 aaKnown RBP5.19□□□□□ -1.58
PTCD3-215ENST00000484203 C1QL2Q7Z5L3 287 aa5.19□□□□□ -1.58
PTCD3-215ENST00000484203 PHC2Q8IXK0 858 aa5.19□□□□□ -1.58
PTCD3-215ENST00000484203 FITM2Q8N6M3 262 aa5.19□□□□□ -1.58
PTCD3-215ENST00000484203 AQP11Q8NBQ7 271 aa5.19□□□□□ -1.58
PTCD3-215ENST00000484203 OR52H1Q8NGJ2 320 aa5.19□□□□□ -1.58
PTCD3-215ENST00000484203 TEX47Q8TBZ9 253 aa5.19□□□□□ -1.58
PTCD3-215ENST00000484203 ZNF799Q96GE5 643 aa5.19□□□□□ -1.58
PTCD3-215ENST00000484203 OR2V2Q96R30 315 aa5.19□□□□□ -1.58
PTCD3-215ENST00000484203 MRI1Q9BV20 369 aa5.19□□□□□ -1.58
PTCD3-215ENST00000484203 C19orf24Q9BVV8 132 aa5.19□□□□□ -1.58
PTCD3-215ENST00000484203 RBM4Q9BWF3 364 aaKnown RBP5.19□□□□□ -1.58
PTCD3-215ENST00000484203 TSSK6Q9BXA6 273 aa5.19□□□□□ -1.58
PTCD3-215ENST00000484203 PRRG3Q9BZD7 231 aa5.19□□□□□ -1.58
PTCD3-215ENST00000484203 RGCCQ9H4X1 137 aa5.19□□□□□ -1.58
PTCD3-215ENST00000484203 ZMAT4Q9H898 229 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms