RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 MITD1Q8WV92 249 aa13.18□□□□□ -0.3
ATG4B-220ENST00000482507 MRPL13Q9BYD1 178 aaKnown RBP13.18□□□□□ -0.3
ATG4B-220ENST00000482507 C12orf4Q9NQ89 552 aa13.18□□□□□ -0.3
ATG4B-220ENST00000482507 LHFPL6Q9Y693 200 aa13.18□□□□□ -0.3
ATG4B-220ENST00000482507 EXPH5Q8NEV8 1989 aa13.17□□□□□ -0.3
ATG4B-220ENST00000482507 FAM25EA8MYX2 175 aa13.17□□□□□ -0.3
ATG4B-220ENST00000482507 EFSO43281 561 aa13.17□□□□□ -0.3
ATG4B-220ENST00000482507 BPNT1O95861 308 aa13.17□□□□□ -0.3
ATG4B-220ENST00000482507 HLA-GP17693 338 aa13.17□□□□□ -0.3
ATG4B-220ENST00000482507 DLSTP36957 453 aa13.17□□□□□ -0.3
ATG4B-220ENST00000482507 FGL1Q08830 312 aa13.17□□□□□ -0.3
ATG4B-220ENST00000482507 LPCAT3Q6P1A2 487 aa13.17□□□□□ -0.3
ATG4B-220ENST00000482507 WDR74Q6RFH5 385 aaPredicted RBP13.17□□□□□ -0.3
ATG4B-220ENST00000482507 MISPQ8IVT2 679 aa13.17□□□□□ -0.3
ATG4B-220ENST00000482507 SLC22A24Q8N4F4 322 aa13.17□□□□□ -0.3
ATG4B-220ENST00000482507 TMEM104Q8NE00 496 aa13.17□□□□□ -0.3
ATG4B-220ENST00000482507 SEMA5BQ9P283 1151 aa13.17□□□□□ -0.3
ATG4B-220ENST00000482507 ZNF319Q9P2F9 582 aa13.17□□□□□ -0.3
ATG4B-220ENST00000482507 NPIPB13A6NJU9 1138 aa13.17□□□□□ -0.3
ATG4B-220ENST00000482507 NPIPB4C9JG80 1138 aa13.17□□□□□ -0.3
ATG4B-220ENST00000482507 SULT2B1O00204 365 aa13.17□□□□□ -0.3
ATG4B-220ENST00000482507 OR2F2O95006 317 aa13.17□□□□□ -0.3
ATG4B-220ENST00000482507 APOC3P02656 99 aa13.17□□□□□ -0.3
ATG4B-220ENST00000482507 PMP2P02689 132 aa13.17□□□□□ -0.3
ATG4B-220ENST00000482507 ERCC1P07992 297 aaPredicted RBP13.17□□□□□ -0.3
ATG4B-220ENST00000482507 SLC2A1P11166 492 aa13.17□□□□□ -0.3
ATG4B-220ENST00000482507 ABOP16442 354 aa13.17□□□□□ -0.3
ATG4B-220ENST00000482507 CDAP32320 146 aa13.17□□□□□ -0.3
ATG4B-220ENST00000482507 ARHGDIBP52566 201 aa13.17□□□□□ -0.3
ATG4B-220ENST00000482507 NUBP1P53384 320 aa13.17□□□□□ -0.3
ATG4B-220ENST00000482507 IL13RA1P78552 427 aa13.17□□□□□ -0.3
ATG4B-220ENST00000482507 OR2F1Q13607 317 aa13.17□□□□□ -0.3
ATG4B-220ENST00000482507 ELP2Q6IA86 826 aa13.17□□□□□ -0.3
ATG4B-220ENST00000482507 TMEM71Q6P5X7 295 aa13.17□□□□□ -0.3
ATG4B-220ENST00000482507 DBX2Q6ZNG2 339 aa13.17□□□□□ -0.3
ATG4B-220ENST00000482507 OR2W3Q7Z3T1 314 aa13.17□□□□□ -0.3
ATG4B-220ENST00000482507 ANKRD37Q7Z713 158 aa13.17□□□□□ -0.3
ATG4B-220ENST00000482507 ANGPTL5Q86XS5 388 aa13.17□□□□□ -0.3
ATG4B-220ENST00000482507 PTPRZ1P23471 2315 aaPredicted RBP13.17□□□□□ -0.3
ATG4B-220ENST00000482507 ADAMTS20P59510 1910 aa13.16□□□□□ -0.3
ATG4B-220ENST00000482507 RALGAPA1Q6GYQ0 2036 aa13.16□□□□□ -0.3
ATG4B-220ENST00000482507 IGHV5-10-1A0A0J9YXX1 117 aa13.16□□□□□ -0.3
ATG4B-220ENST00000482507 KANTRA0A1W2PQU2 76 aa13.16□□□□□ -0.3
ATG4B-220ENST00000482507 TMEM14DPA8MWL7 114 aa13.16□□□□□ -0.3
ATG4B-220ENST00000482507 ZNF814B7Z6K7 855 aa13.16□□□□□ -0.3
ATG4B-220ENST00000482507 TIAF1O95411 115 aa13.16□□□□□ -0.3
ATG4B-220ENST00000482507 PNLIPP16233 465 aa13.16□□□□□ -0.3
ATG4B-220ENST00000482507 AKR1C4P17516 323 aa13.16□□□□□ -0.3
ATG4B-220ENST00000482507 NAT1P18440 290 aa13.16□□□□□ -0.3
ATG4B-220ENST00000482507 CASRP41180 1078 aa13.16□□□□□ -0.3
ATG4B-220ENST00000482507 MYBPHQ13203 477 aa13.16□□□□□ -0.3
ATG4B-220ENST00000482507 ZMYND11Q15326 602 aa13.16□□□□□ -0.3
ATG4B-220ENST00000482507 KCTD9Q7L273 389 aa13.16□□□□□ -0.3
ATG4B-220ENST00000482507 ZDHHC22Q8N966 263 aa13.16□□□□□ -0.3
ATG4B-220ENST00000482507 BOLLQ8N9W6 283 aaKnown RBP13.16□□□□□ -0.3
ATG4B-220ENST00000482507 OR10H5Q8NGA6 315 aa13.16□□□□□ -0.3
ATG4B-220ENST00000482507 POC1BQ8TC44 478 aa13.16□□□□□ -0.3
ATG4B-220ENST00000482507 NAT6Q93015 286 aa13.16□□□□□ -0.3
ATG4B-220ENST00000482507 C1orf147Q96MC9 270 aaPredicted RBP13.16□□□□□ -0.3
ATG4B-220ENST00000482507 ZNF471Q9BX82 626 aaPredicted RBP13.16□□□□□ -0.3
ATG4B-220ENST00000482507 ZNF292O60281 2723 aa13.16□□□□□ -0.3
ATG4B-220ENST00000482507 ZNF208O43345 1280 aa13.15□□□□□ -0.3
ATG4B-220ENST00000482507 KLK2P20151 261 aa13.15□□□□□ -0.3
ATG4B-220ENST00000482507 VAMP1P23763 118 aa13.15□□□□□ -0.3
ATG4B-220ENST00000482507 PLAC9Q5JTB6 97 aa13.15□□□□□ -0.3
ATG4B-220ENST00000482507 AWAT2Q6E213 333 aa13.15□□□□□ -0.3
ATG4B-220ENST00000482507 OR5AS1Q8N127 324 aa13.15□□□□□ -0.3
ATG4B-220ENST00000482507 OR10R2Q8NGX6 335 aa13.15□□□□□ -0.3
ATG4B-220ENST00000482507 DDIT4LQ96D03 193 aa13.15□□□□□ -0.3
ATG4B-220ENST00000482507 MICU1Q9BPX6 476 aa13.15□□□□□ -0.3
ATG4B-220ENST00000482507 UQCC2Q9BRT2 126 aa13.15□□□□□ -0.3
ATG4B-220ENST00000482507 LPAR5Q9H1C0 372 aa13.15□□□□□ -0.3
ATG4B-220ENST00000482507 COMMD9Q9P000 198 aa13.15□□□□□ -0.3
ATG4B-220ENST00000482507 MBD2Q9UBB5 411 aa13.15□□□□□ -0.3
ATG4B-220ENST00000482507 PRELID1Q9Y255 219 aa13.15□□□□□ -0.3
ATG4B-220ENST00000482507 A0A1W2PP11 408 aa13.15□□□□□ -0.3
ATG4B-220ENST00000482507 EEF1E1-BLOC1S5C9J1V9 151 aa13.15□□□□□ -0.3
ATG4B-220ENST00000482507 ZNF17P17021 662 aa13.15□□□□□ -0.3
ATG4B-220ENST00000482507 CTRB1P17538 263 aa13.15□□□□□ -0.3
ATG4B-220ENST00000482507 LAP3P28838 519 aa13.15□□□□□ -0.3
ATG4B-220ENST00000482507 P2RY4P51582 365 aa13.15□□□□□ -0.3
ATG4B-220ENST00000482507 PRKXP51817 358 aa13.15□□□□□ -0.3
ATG4B-220ENST00000482507 DMRTC1Q5HYR2 192 aa13.15□□□□□ -0.3
ATG4B-220ENST00000482507 CTRB2Q6GPI1 263 aa13.15□□□□□ -0.3
ATG4B-220ENST00000482507 KLHL24Q6TFL4 600 aa13.15□□□□□ -0.3
ATG4B-220ENST00000482507 TMPPEQ6ZT21 453 aa13.15□□□□□ -0.3
ATG4B-220ENST00000482507 ACOT7LQ6ZUV0 252 aa13.15□□□□□ -0.3
ATG4B-220ENST00000482507 CARFQ8N187 725 aa13.15□□□□□ -0.3
ATG4B-220ENST00000482507 MARCH1Q8TCQ1 289 aa13.15□□□□□ -0.3
ATG4B-220ENST00000482507 FBXW5Q969U6 566 aa13.15□□□□□ -0.3
ATG4B-220ENST00000482507 IFT46Q9NQC8 304 aa13.15□□□□□ -0.3
ATG4B-220ENST00000482507 ALKBH4Q9NXW9 302 aa13.15□□□□□ -0.3
ATG4B-220ENST00000482507 ATP6V1G2-DDX39BF2Z307 99 aa13.14□□□□□ -0.31
ATG4B-220ENST00000482507 SOCS1O15524 211 aa13.14□□□□□ -0.31
ATG4B-220ENST00000482507 RAMP1O60894 148 aa13.14□□□□□ -0.31
ATG4B-220ENST00000482507 RAB3AP20336 220 aa13.14□□□□□ -0.31
ATG4B-220ENST00000482507 ZNF93P35789 620 aaPredicted RBP13.14□□□□□ -0.31
ATG4B-220ENST00000482507 PTGDSP41222 190 aa13.14□□□□□ -0.31
ATG4B-220ENST00000482507 STARP49675 285 aa13.14□□□□□ -0.31
ATG4B-220ENST00000482507 PPIAP62937 165 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms