RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 TP53TG5Q9Y2B4 290 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 SLC35A3Q9Y2D2 325 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 MRPS18CQ9Y3D5 142 aaKnown RBP3.43□□□□□ -1.86
VPS41-212ENST00000482217 YLPM1P49750 1951 aaKnown RBP3.43□□□□□ -1.86
VPS41-212ENST00000482217 CACNA1SQ13698 1873 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 RALGAPA1Q6GYQ0 2036 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 RTL9Q8NET4 1388 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 NAV1Q8NEY1 1877 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 A0A0A6YYD4 124 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 USP27XA6NNY8 438 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 TRDCB7Z8K6 153 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 ANKRD63C9JTQ0 380 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 ANKRD65E5RJM6 399 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 EI24O14681 340 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 CHP2O43745 196 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 SSNA1O43805 119 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 PRKYO43930 277 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 SLC16A7O60669 478 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 DCTN3O75935 186 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 SEC24AO95486 1093 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 HAND1O96004 215 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 CD8AP01732 235 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 CRYAAP02489 173 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 RLN2P04090 185 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 HTR1AP08908 422 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 FBP1P09467 338 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 H2AFXP16104 143 aaPredicted RBP3.42□□□□□ -1.86
VPS41-212ENST00000482217 SDC1P18827 310 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 TBPP20226 339 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 TAC1P20366 129 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 SERPINA2P20848 420 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 ADORA2BP29275 332 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 RPL12P30050 165 aaKnown RBP3.42□□□□□ -1.86
VPS41-212ENST00000482217 CCR7P32248 378 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 MAP2K4P45985 399 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 RPS9P46781 194 aaKnown RBP3.42□□□□□ -1.86
VPS41-212ENST00000482217 GALR1P47211 349 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 UBE2E1P51965 193 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 LIM2P55344 173 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 DLX6P56179 175 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 FBXW4P57775 412 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 DSCR9P59020 149 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 NANOS2P60321 138 aaKnown RBP3.42□□□□□ -1.86
VPS41-212ENST00000482217 RPL8P62917 257 aaKnown RBP3.42□□□□□ -1.86
VPS41-212ENST00000482217 GNG3P63215 75 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 RIPPLY1Q0D2K3 151 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 UNC119Q13432 240 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 PPP1R1AQ13522 171 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 OXA1LQ15070 435 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 DUSP5Q16690 384 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 HLA-DRB5Q30154 266 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 EIPR1Q53HC9 387 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 ASPRV1Q53RT3 343 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 TFDP3Q5H9I0 405 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 LCE1AQ5T7P2 110 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 OR8G2PQ6IF36 304 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 C12orf54Q6X4T0 127 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 PRSS48Q7RTY5 328 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 PIWIL4Q7Z3Z4 852 aaKnown RBP3.42□□□□□ -1.86
VPS41-212ENST00000482217 GLT6D1Q7Z4J2 308 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 NIT1Q86X76 327 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 CBLN2Q8IUK8 224 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 RNF113BQ8IZP6 322 aaKnown RBP3.42□□□□□ -1.86
VPS41-212ENST00000482217 ZNF843Q8N446 348 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 EID2Q8N6I1 236 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 OR7A2PQ8NGA2 310 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 OR4C13Q8NGP0 309 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 OR1P1Q8NH06 330 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 OR52N5Q8NH56 324 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 C8orf46Q8TAG6 207 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 STOML3Q8TAV4 291 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 CD200R1Q8TD46 325 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 Q8WTZ3 238 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 PHLDA1Q8WV24 401 aaPredicted RBP3.42□□□□□ -1.86
VPS41-212ENST00000482217 SMIM12Q96EX1 92 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 ADGRG7Q96K78 797 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 UBE2E2Q96LR5 201 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 DUX3Q96PT4 197 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 RBP7Q96R05 134 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 MEIS3Q99687 375 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 APOL4Q9BPW4 351 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 ABCG5Q9H222 651 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 MS4A6AQ9H2W1 248 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 OR51I1Q9H343 314 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 PPDPFQ9H3Y8 114 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 C3orf14Q9HBI5 128 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 SS18L2Q9UHA2 77 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 LGALS13Q9UHV8 139 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 VDAC3Q9Y277 283 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 PRELID3BQ9Y3B1 194 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 KLF12Q9Y4X4 402 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 PCM1Q15154 2024 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 MYH2Q9UKX2 1941 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 CLUHO75153 1309 aa3.42□□□□□ -1.86
VPS41-212ENST00000482217 ZNF518AQ6AHZ1 1483 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 PLEKHH1Q9ULM0 1364 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 RLFQ13129 1914 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 A0A087WUJ7 227 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 TRBV4-1A0A0J9YWV2 114 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 MEIOCA2RUB1 952 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms