RNA–Protein interactions for RNA: ENST00000480952.1

NDC1-202, Transcript of NDC1 transmembrane nucleoporin, humanhuman

TSL 3

Gene NDC1, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-202ENST00000480952 SLC36A1Q7Z2H8 476 aa10.91□□□□□ -0.66
NDC1-202ENST00000480952 FAM156AQ8NDB6 213 aa10.91□□□□□ -0.66
NDC1-202ENST00000480952 LZICQ8WZA0 190 aa10.91□□□□□ -0.66
NDC1-202ENST00000480952 TPD52L3Q96J77 140 aa10.91□□□□□ -0.66
NDC1-202ENST00000480952 PRRC1Q96M27 445 aa10.91□□□□□ -0.66
NDC1-202ENST00000480952 FNDC11Q9BVV2 318 aa10.91□□□□□ -0.66
NDC1-202ENST00000480952 VSX1Q9NZR4 365 aaPredicted RBP10.91□□□□□ -0.66
NDC1-202ENST00000480952 DUX4Q9UBX2 424 aa10.91□□□□□ -0.66
NDC1-202ENST00000480952 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.9□□□□□ -0.66
NDC1-202ENST00000480952 LOC100653049A0A140TA62 436 aa10.9□□□□□ -0.66
NDC1-202ENST00000480952 SOCS2O14508 198 aa10.9□□□□□ -0.66
NDC1-202ENST00000480952 CDC42EP2O14613 210 aa10.9□□□□□ -0.66
NDC1-202ENST00000480952 KRT34O76011 436 aa10.9□□□□□ -0.66
NDC1-202ENST00000480952 MUC1P15941 1255 aaPredicted RBP10.9□□□□□ -0.66
NDC1-202ENST00000480952 ZNF26P17031 533 aaPredicted RBP10.9□□□□□ -0.66
NDC1-202ENST00000480952 SDHAP31040 664 aa10.9□□□□□ -0.66
NDC1-202ENST00000480952 GPR4P46093 362 aa10.9□□□□□ -0.66
NDC1-202ENST00000480952 ELF3P78545 371 aaPredicted RBP10.9□□□□□ -0.66
NDC1-202ENST00000480952 CD69Q07108 199 aa10.9□□□□□ -0.66
NDC1-202ENST00000480952 TRAP1Q12931 704 aaKnown RBP10.9□□□□□ -0.66
NDC1-202ENST00000480952 TRAM2Q15035 370 aa10.9□□□□□ -0.66
NDC1-202ENST00000480952 LRRC75BQ2VPJ9 315 aa10.9□□□□□ -0.66
NDC1-202ENST00000480952 LRRC10Q5BKY1 277 aa10.9□□□□□ -0.66
NDC1-202ENST00000480952 WDR38Q5JTN6 314 aa10.9□□□□□ -0.66
NDC1-202ENST00000480952 GPR139Q6DWJ6 353 aa10.9□□□□□ -0.66
NDC1-202ENST00000480952 PGBD2Q6P3X8 592 aa10.9□□□□□ -0.66
NDC1-202ENST00000480952 RNF113BQ8IZP6 322 aaKnown RBP10.9□□□□□ -0.66
NDC1-202ENST00000480952 FAM216BQ8N7L0 139 aa10.9□□□□□ -0.66
NDC1-202ENST00000480952 SLC7A13Q8TCU3 470 aa10.9□□□□□ -0.66
NDC1-202ENST00000480952 H1FXQ92522 213 aaKnown RBP10.9□□□□□ -0.66
NDC1-202ENST00000480952 RORBQ92753 470 aa10.9□□□□□ -0.66
NDC1-202ENST00000480952 TNFRSF14Q92956 283 aa10.9□□□□□ -0.66
NDC1-202ENST00000480952 C7orf26Q96N11 449 aa10.9□□□□□ -0.66
NDC1-202ENST00000480952 NKX3-1Q99801 234 aaPredicted RBP10.9□□□□□ -0.66
NDC1-202ENST00000480952 ATF6BQ99941 703 aa10.9□□□□□ -0.66
NDC1-202ENST00000480952 CITED2Q99967 270 aaPredicted RBP10.9□□□□□ -0.66
NDC1-202ENST00000480952 OCSTAMPQ9BR26 566 aa10.9□□□□□ -0.66
NDC1-202ENST00000480952 DCTN5Q9BTE1 182 aa10.9□□□□□ -0.66
NDC1-202ENST00000480952 C14orf119Q9NWQ9 140 aa10.9□□□□□ -0.66
NDC1-202ENST00000480952 MRPL15Q9P015 296 aaKnown RBP10.9□□□□□ -0.66
NDC1-202ENST00000480952 PRPF19Q9UMS4 504 aaKnown RBP10.9□□□□□ -0.66
NDC1-202ENST00000480952 CRABP1P29762 137 aa10.89□□□□□ -0.67
NDC1-202ENST00000480952 GRK5P34947 590 aa10.89□□□□□ -0.67
NDC1-202ENST00000480952 MDH1P40925 334 aaKnown RBP10.89□□□□□ -0.67
NDC1-202ENST00000480952 TPTEP56180 551 aa10.89□□□□□ -0.67
NDC1-202ENST00000480952 BLMHQ13867 455 aa10.89□□□□□ -0.67
NDC1-202ENST00000480952 CYLC2Q14093 348 aaPredicted RBP10.89□□□□□ -0.67
NDC1-202ENST00000480952 PCK2Q16822 640 aa10.89□□□□□ -0.67
NDC1-202ENST00000480952 LRRC23Q53EV4 343 aaPredicted RBP10.89□□□□□ -0.67
NDC1-202ENST00000480952 CYBRD1Q53TN4 286 aa10.89□□□□□ -0.67
NDC1-202ENST00000480952 NANOGP8Q6NSW7 305 aa10.89□□□□□ -0.67
NDC1-202ENST00000480952 DNM1P34Q6PK57 102 aa10.89□□□□□ -0.67
NDC1-202ENST00000480952 TBPL2Q6SJ96 375 aa10.89□□□□□ -0.67
NDC1-202ENST00000480952 CFAP77Q6ZQR2 320 aa10.89□□□□□ -0.67
NDC1-202ENST00000480952 TMPRSS11FQ6ZWK6 438 aa10.89□□□□□ -0.67
NDC1-202ENST00000480952 RRM2BQ7LG56 351 aa10.89□□□□□ -0.67
NDC1-202ENST00000480952 TSEN54Q7Z6J9 526 aaKnown RBP10.89□□□□□ -0.67
NDC1-202ENST00000480952 ADCK1Q86TW2 530 aa10.89□□□□□ -0.67
NDC1-202ENST00000480952 LINC00346Q8IVM7 164 aa10.89□□□□□ -0.67
NDC1-202ENST00000480952 LNX2Q8N448 690 aa10.89□□□□□ -0.67
NDC1-202ENST00000480952 WFDC9Q8NEX5 89 aa10.89□□□□□ -0.67
NDC1-202ENST00000480952 OR2AJ1Q8NGZ0 328 aa10.89□□□□□ -0.67
NDC1-202ENST00000480952 LRRC29Q8WV35 223 aa10.89□□□□□ -0.67
NDC1-202ENST00000480952 C17orf50Q8WW18 174 aa10.89□□□□□ -0.67
NDC1-202ENST00000480952 TSSK2Q96PF2 358 aa10.89□□□□□ -0.67
NDC1-202ENST00000480952 SH3GL1Q99961 368 aa10.89□□□□□ -0.67
NDC1-202ENST00000480952 METTL8Q9H825 291 aaKnown RBP10.89□□□□□ -0.67
NDC1-202ENST00000480952 SF3B6Q9Y3B4 125 aaKnown RBP10.89□□□□□ -0.67
NDC1-202ENST00000480952 BHLHE40O14503 412 aa10.88□□□□□ -0.67
NDC1-202ENST00000480952 ACOT8O14734 319 aa10.88□□□□□ -0.67
NDC1-202ENST00000480952 PEX14O75381 377 aa10.88□□□□□ -0.67
NDC1-202ENST00000480952 NDUFB2O95178 105 aa10.88□□□□□ -0.67
NDC1-202ENST00000480952 PPP1R3DO95685 299 aa10.88□□□□□ -0.67
NDC1-202ENST00000480952 MAGOHP61326 146 aaKnown RBP10.88□□□□□ -0.67
NDC1-202ENST00000480952 ZNF92Q03936 586 aa10.88□□□□□ -0.67
NDC1-202ENST00000480952 RABL3Q5HYI8 236 aa10.88□□□□□ -0.67
NDC1-202ENST00000480952 SLC18B1Q6NT16 456 aa10.88□□□□□ -0.67
NDC1-202ENST00000480952 CRIP3Q6Q6R5 217 aa10.88□□□□□ -0.67
NDC1-202ENST00000480952 PTCHD4Q6ZW05 846 aa10.88□□□□□ -0.67
NDC1-202ENST00000480952 MBOAT2Q6ZWT7 520 aa10.88□□□□□ -0.67
NDC1-202ENST00000480952 OFCC1Q8IZS5 231 aa10.88□□□□□ -0.67
NDC1-202ENST00000480952 RNPEPL1Q9HAU8 725 aa10.88□□□□□ -0.67
NDC1-202ENST00000480952 SRA1Q9HD15 236 aaKnown RBP10.88□□□□□ -0.67
NDC1-202ENST00000480952 NRIP3Q9NQ35 241 aa10.88□□□□□ -0.67
NDC1-202ENST00000480952 ADA2Q9NZK5 511 aa10.88□□□□□ -0.67
NDC1-202ENST00000480952 IER3IP1Q9Y5U9 82 aa10.88□□□□□ -0.67
NDC1-202ENST00000480952 A0A087WUU8 490 aa10.87□□□□□ -0.67
NDC1-202ENST00000480952 A0A1W2PQ09 198 aa10.87□□□□□ -0.67
NDC1-202ENST00000480952 WI2-2373I1.2A0A1W2PRP0 233 aa10.87□□□□□ -0.67
NDC1-202ENST00000480952 ADARB2-AS1A8MUL3 147 aa10.87□□□□□ -0.67
NDC1-202ENST00000480952 J3KTA2 159 aa10.87□□□□□ -0.67
NDC1-202ENST00000480952 M0R1W7 72 aa10.87□□□□□ -0.67
NDC1-202ENST00000480952 DCTN6O00399 190 aa10.87□□□□□ -0.67
NDC1-202ENST00000480952 FAHP16930 419 aa10.87□□□□□ -0.67
NDC1-202ENST00000480952 POU1F1P28069 291 aa10.87□□□□□ -0.67
NDC1-202ENST00000480952 KDELR2P33947 212 aa10.87□□□□□ -0.67
NDC1-202ENST00000480952 MSX2P35548 267 aaPredicted RBP10.87□□□□□ -0.67
NDC1-202ENST00000480952 CDKN2AP42771 156 aaKnown RBP10.87□□□□□ -0.67
NDC1-202ENST00000480952 TGM4P49221 684 aa10.87□□□□□ -0.67
NDC1-202ENST00000480952 SELENOWP63302 87 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms