RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 METTL17Q9H7H0 456 aaPredicted RBP14.29□□□□□ -0.12
HSPG2-209ENST00000480900 METRNQ9UJH8 293 aa14.29□□□□□ -0.12
HSPG2-209ENST00000480900 POLR3KQ9Y2Y1 108 aaPredicted RBP14.29□□□□□ -0.12
HSPG2-209ENST00000480900 IGHV3-64DA0A0J9YX35 117 aa14.28□□□□□ -0.12
HSPG2-209ENST00000480900 TBX1O43435 398 aa14.28□□□□□ -0.12
HSPG2-209ENST00000480900 SELENOFO60613 162 aa14.28□□□□□ -0.12
HSPG2-209ENST00000480900 ANXA2P07355 339 aaKnown RBP14.28□□□□□ -0.12
HSPG2-209ENST00000480900 LYNP07948 512 aa14.28□□□□□ -0.12
HSPG2-209ENST00000480900 FCGR1AP12314 374 aa14.28□□□□□ -0.12
HSPG2-209ENST00000480900 FASP25445 335 aa14.28□□□□□ -0.12
HSPG2-209ENST00000480900 DDOSTP39656 456 aa14.28□□□□□ -0.12
HSPG2-209ENST00000480900 PMELP40967 661 aa14.28□□□□□ -0.12
HSPG2-209ENST00000480900 ESRRGP62508 458 aa14.28□□□□□ -0.12
HSPG2-209ENST00000480900 SNAPC1Q16533 368 aa14.28□□□□□ -0.12
HSPG2-209ENST00000480900 C1orf229Q6ZS94 237 aaPredicted RBP14.28□□□□□ -0.12
HSPG2-209ENST00000480900 PRSS45Q7RTY3 260 aa14.28□□□□□ -0.12
HSPG2-209ENST00000480900 KLBQ86Z14 1044 aa14.28□□□□□ -0.12
HSPG2-209ENST00000480900 PLPP7Q8NBV4 271 aa14.28□□□□□ -0.12
HSPG2-209ENST00000480900 BBS1Q8NFJ9 593 aa14.28□□□□□ -0.12
HSPG2-209ENST00000480900 OR56B2PQ8NGI1 322 aa14.28□□□□□ -0.12
HSPG2-209ENST00000480900 OR52H1Q8NGJ2 320 aa14.28□□□□□ -0.12
HSPG2-209ENST00000480900 OR11L1Q8NGX0 322 aa14.28□□□□□ -0.12
HSPG2-209ENST00000480900 TMPRSS13Q9BYE2 586 aa14.28□□□□□ -0.12
HSPG2-209ENST00000480900 AP4S1Q9Y587 144 aa14.28□□□□□ -0.12
HSPG2-209ENST00000480900 N6AMT1Q9Y5N5 214 aa14.28□□□□□ -0.12
HSPG2-209ENST00000480900 CEACAM18A8MTB9 384 aa14.27□□□□□ -0.13
HSPG2-209ENST00000480900 A8MXK9 166 aa14.27□□□□□ -0.13
HSPG2-209ENST00000480900 G3V2T6 193 aa14.27□□□□□ -0.13
HSPG2-209ENST00000480900 PTBP3O95758 552 aaKnown RBP14.27□□□□□ -0.13
HSPG2-209ENST00000480900 CYB5R3P00387 301 aaPredicted RBP14.27□□□□□ -0.13
HSPG2-209ENST00000480900 AVPP01185 164 aa14.27□□□□□ -0.13
HSPG2-209ENST00000480900 H2BFMP0C1H6 154 aa14.27□□□□□ -0.13
HSPG2-209ENST00000480900 CFL1P23528 166 aaKnown RBP14.27□□□□□ -0.13
HSPG2-209ENST00000480900 ZFP36P26651 326 aaKnown RBP14.27□□□□□ -0.13
HSPG2-209ENST00000480900 NAA10P41227 235 aaPredicted RBP14.27□□□□□ -0.13
HSPG2-209ENST00000480900 ZNF121P58317 390 aaPredicted RBP14.27□□□□□ -0.13
HSPG2-209ENST00000480900 RPS7P62081 194 aaKnown RBP14.27□□□□□ -0.13
HSPG2-209ENST00000480900 PTGES3Q15185 160 aaKnown RBP14.27□□□□□ -0.13
HSPG2-209ENST00000480900 TIGD6Q17RP2 521 aa14.27□□□□□ -0.13
HSPG2-209ENST00000480900 KRTAP24-1Q3LI83 254 aa14.27□□□□□ -0.13
HSPG2-209ENST00000480900 LIPNQ5VXI9 398 aa14.27□□□□□ -0.13
HSPG2-209ENST00000480900 SLC16A9Q7RTY1 509 aa14.27□□□□□ -0.13
HSPG2-209ENST00000480900 PHC2Q8IXK0 858 aa14.27□□□□□ -0.13
HSPG2-209ENST00000480900 SPERTQ8NA61 448 aa14.27□□□□□ -0.13
HSPG2-209ENST00000480900 REEP6Q96HR9 211 aa14.27□□□□□ -0.13
HSPG2-209ENST00000480900 PRRG3Q9BZD7 231 aa14.27□□□□□ -0.13
HSPG2-209ENST00000480900 GABARAPL1Q9H0R8 117 aa14.27□□□□□ -0.13
HSPG2-209ENST00000480900 TMEM165Q9HC07 324 aa14.27□□□□□ -0.13
HSPG2-209ENST00000480900 KRT84Q9NSB2 600 aa14.27□□□□□ -0.13
HSPG2-209ENST00000480900 TVP23BQ9NYZ1 205 aa14.27□□□□□ -0.13
HSPG2-209ENST00000480900 LRCH1Q9Y2L9 728 aa14.27□□□□□ -0.13
HSPG2-209ENST00000480900 LOC105371242A0A075B767 164 aa14.26□□□□□ -0.13
HSPG2-209ENST00000480900 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.26□□□□□ -0.13
HSPG2-209ENST00000480900 TCF21O43680 179 aa14.26□□□□□ -0.13
HSPG2-209ENST00000480900 FAM20BO75063 409 aa14.26□□□□□ -0.13
HSPG2-209ENST00000480900 CIB2O75838 187 aa14.26□□□□□ -0.13
HSPG2-209ENST00000480900 IRF2P14316 349 aa14.26□□□□□ -0.13
HSPG2-209ENST00000480900 FAM3AP98173 230 aa14.26□□□□□ -0.13
HSPG2-209ENST00000480900 MZT1Q08AG7 82 aa14.26□□□□□ -0.13
HSPG2-209ENST00000480900 APOFQ13790 326 aa14.26□□□□□ -0.13
HSPG2-209ENST00000480900 ZNF404Q494X3 552 aa14.26□□□□□ -0.13
HSPG2-209ENST00000480900 ESCO2Q56NI9 601 aa14.26□□□□□ -0.13
HSPG2-209ENST00000480900 PRAMEF6Q5VXH4 476 aa14.26□□□□□ -0.13
HSPG2-209ENST00000480900 FAM57BQ71RH2 274 aa14.26□□□□□ -0.13
HSPG2-209ENST00000480900 C1QL2Q7Z5L3 287 aa14.26□□□□□ -0.13
HSPG2-209ENST00000480900 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.26□□□□□ -0.13
HSPG2-209ENST00000480900 ZDHHC13Q8IUH4 622 aa14.26□□□□□ -0.13
HSPG2-209ENST00000480900 THEM6Q8WUY1 208 aa14.26□□□□□ -0.13
HSPG2-209ENST00000480900 SGK3Q96BR1 496 aa14.26□□□□□ -0.13
HSPG2-209ENST00000480900 YIPF3Q9GZM5 350 aa14.26□□□□□ -0.13
HSPG2-209ENST00000480900 OR10A2Q9H208 303 aa14.26□□□□□ -0.13
HSPG2-209ENST00000480900 RGCCQ9H4X1 137 aa14.26□□□□□ -0.13
HSPG2-209ENST00000480900 NIPAL2Q9H841 368 aa14.26□□□□□ -0.13
HSPG2-209ENST00000480900 FN3KRPQ9HA64 309 aa14.26□□□□□ -0.13
HSPG2-209ENST00000480900 UFSP2Q9NUQ7 469 aa14.26□□□□□ -0.13
HSPG2-209ENST00000480900 DNAJC27Q9NZQ0 273 aa14.26□□□□□ -0.13
HSPG2-209ENST00000480900 ENOPH1Q9UHY7 261 aa14.26□□□□□ -0.13
HSPG2-209ENST00000480900 hCG_38984A0A1B0GV85 526 aa14.25□□□□□ -0.13
HSPG2-209ENST00000480900 ANKRD30BLA7E2S9 258 aa14.25□□□□□ -0.13
HSPG2-209ENST00000480900 ZNF205O95201 554 aa14.25□□□□□ -0.13
HSPG2-209ENST00000480900 WNT2P09544 360 aa14.25□□□□□ -0.13
HSPG2-209ENST00000480900 RPS2P15880 293 aaKnown RBP14.25□□□□□ -0.13
HSPG2-209ENST00000480900 PSMA6P60900 246 aaKnown RBP14.25□□□□□ -0.13
HSPG2-209ENST00000480900 SEC61A1P61619 476 aaKnown RBP14.25□□□□□ -0.13
HSPG2-209ENST00000480900 MPPED2Q15777 294 aa14.25□□□□□ -0.13
HSPG2-209ENST00000480900 LCN1P1Q5VSP4 162 aa14.25□□□□□ -0.13
HSPG2-209ENST00000480900 KDM4DQ6B0I6 523 aa14.25□□□□□ -0.13
HSPG2-209ENST00000480900 TMEM246Q9BRR3 403 aa14.25□□□□□ -0.13
HSPG2-209ENST00000480900 C7orf69Q9H7B7 122 aa14.25□□□□□ -0.13
HSPG2-209ENST00000480900 C14orf119Q9NWQ9 140 aa14.25□□□□□ -0.13
HSPG2-209ENST00000480900 MIOXQ9UGB7 285 aa14.25□□□□□ -0.13
HSPG2-209ENST00000480900 KLHDC2Q9Y2U9 406 aa14.25□□□□□ -0.13
HSPG2-209ENST00000480900 PPIAL4AQ9Y536 164 aa14.25□□□□□ -0.13
HSPG2-209ENST00000480900 A0A0A6YYJ9 748 aa14.24□□□□□ -0.13
HSPG2-209ENST00000480900 CCDC182A6NF36 153 aa14.24□□□□□ -0.13
HSPG2-209ENST00000480900 MITFO75030 526 aaPredicted RBP14.24□□□□□ -0.13
HSPG2-209ENST00000480900 ALOX5APP20292 161 aa14.24□□□□□ -0.13
HSPG2-209ENST00000480900 EPHA1P21709 976 aa14.24□□□□□ -0.13
HSPG2-209ENST00000480900 FAM201AQ5SY85 155 aa14.24□□□□□ -0.13
HSPG2-209ENST00000480900 SLX4IPQ5VYV7 408 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms