RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 TCRBV5S2A0A599 114 aa12.69□□□□□ -0.38
LIMS3-203ENST00000480744 A6NLC8 198 aa12.69□□□□□ -0.38
LIMS3-203ENST00000480744 C22orf46C9J442 243 aa12.69□□□□□ -0.38
LIMS3-203ENST00000480744 LGALS8O00214 317 aa12.69□□□□□ -0.38
LIMS3-203ENST00000480744 ENSAO43768 121 aaKnown RBP12.69□□□□□ -0.38
LIMS3-203ENST00000480744 GMDSO60547 372 aa12.69□□□□□ -0.38
LIMS3-203ENST00000480744 SOX14O95416 240 aa12.69□□□□□ -0.38
LIMS3-203ENST00000480744 GASTP01350 101 aa12.69□□□□□ -0.38
LIMS3-203ENST00000480744 GRPP07492 148 aa12.69□□□□□ -0.38
LIMS3-203ENST00000480744 ENTPD1P49961 510 aa12.69□□□□□ -0.38
LIMS3-203ENST00000480744 BNIP1Q12981 228 aa12.69□□□□□ -0.38
LIMS3-203ENST00000480744 CRMP1Q14194 572 aa12.69□□□□□ -0.38
LIMS3-203ENST00000480744 KCNJ8Q15842 424 aa12.69□□□□□ -0.38
LIMS3-203ENST00000480744 GPR157Q5UAW9 335 aa12.69□□□□□ -0.38
LIMS3-203ENST00000480744 ZNF841Q6ZN19 808 aa12.69□□□□□ -0.38
LIMS3-203ENST00000480744 RASSF6Q6ZTQ3 369 aa12.69□□□□□ -0.38
LIMS3-203ENST00000480744 ZNF511Q8NB15 262 aa12.69□□□□□ -0.38
LIMS3-203ENST00000480744 AQP11Q8NBQ7 271 aa12.69□□□□□ -0.38
LIMS3-203ENST00000480744 OR6K6Q8NGW6 343 aa12.69□□□□□ -0.38
LIMS3-203ENST00000480744 SLAMF6Q96DU3 332 aa12.69□□□□□ -0.38
LIMS3-203ENST00000480744 DDOQ99489 341 aa12.69□□□□□ -0.38
LIMS3-203ENST00000480744 THTPAQ9BU02 230 aa12.69□□□□□ -0.38
LIMS3-203ENST00000480744 TNFRSF19Q9NS68 423 aa12.69□□□□□ -0.38
LIMS3-203ENST00000480744 IL20Q9NYY1 176 aa12.69□□□□□ -0.38
LIMS3-203ENST00000480744 ACTR3BQ9P1U1 418 aa12.69□□□□□ -0.38
LIMS3-203ENST00000480744 ERVK-18Q9QC07 812 aa12.69□□□□□ -0.38
LIMS3-203ENST00000480744 CTSZQ9UBR2 303 aa12.69□□□□□ -0.38
LIMS3-203ENST00000480744 PRPF19Q9UMS4 504 aaKnown RBP12.69□□□□□ -0.38
LIMS3-203ENST00000480744 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.68□□□□□ -0.38
LIMS3-203ENST00000480744 hCG_1807616A0A1W2PRN6 198 aa12.68□□□□□ -0.38
LIMS3-203ENST00000480744 CLDN34H7C241 214 aa12.68□□□□□ -0.38
LIMS3-203ENST00000480744 ZNF593O00488 134 aaPredicted RBP12.68□□□□□ -0.38
LIMS3-203ENST00000480744 HOXA3O43365 443 aaPredicted RBP12.68□□□□□ -0.38
LIMS3-203ENST00000480744 TBX1O43435 398 aa12.68□□□□□ -0.38
LIMS3-203ENST00000480744 ADAM20O43506 726 aa12.68□□□□□ -0.38
LIMS3-203ENST00000480744 OTX1P32242 354 aaPredicted RBP12.68□□□□□ -0.38
LIMS3-203ENST00000480744 PSMB10P40306 273 aa12.68□□□□□ -0.38
LIMS3-203ENST00000480744 HMGA2P52926 109 aa12.68□□□□□ -0.38
LIMS3-203ENST00000480744 IL13RA1P78552 427 aa12.68□□□□□ -0.38
LIMS3-203ENST00000480744 DEFB112Q30KQ8 113 aa12.68□□□□□ -0.38
LIMS3-203ENST00000480744 ZNF362Q5T0B9 420 aaPredicted RBP12.68□□□□□ -0.38
LIMS3-203ENST00000480744 ZNF770Q6IQ21 691 aaPredicted RBP12.68□□□□□ -0.38
LIMS3-203ENST00000480744 LCN8Q6JVE9 175 aa12.68□□□□□ -0.38
LIMS3-203ENST00000480744 ZNF826PQ6ZT77 177 aa12.68□□□□□ -0.38
LIMS3-203ENST00000480744 ARHGAP24Q8N264 748 aa12.68□□□□□ -0.38
LIMS3-203ENST00000480744 OR56B2PQ8NGI1 322 aa12.68□□□□□ -0.38
LIMS3-203ENST00000480744 CCDC124Q96CT7 223 aaKnown RBP12.68□□□□□ -0.38
LIMS3-203ENST00000480744 KCNJ15Q99712 375 aa12.68□□□□□ -0.38
LIMS3-203ENST00000480744 TRIM15Q9C019 465 aa12.68□□□□□ -0.38
LIMS3-203ENST00000480744 ARMC1Q9NVT9 282 aa12.68□□□□□ -0.38
LIMS3-203ENST00000480744 MRPL15Q9P015 296 aaKnown RBP12.68□□□□□ -0.38
LIMS3-203ENST00000480744 KIF17Q9P2E2 1029 aa12.68□□□□□ -0.38
LIMS3-203ENST00000480744 U3KQV3 271 aa12.68□□□□□ -0.38
LIMS3-203ENST00000480744 ZNF878C9JN71 531 aa12.67□□□□□ -0.38
LIMS3-203ENST00000480744 ACOT8O14734 319 aa12.67□□□□□ -0.38
LIMS3-203ENST00000480744 WIPF1O43516 503 aa12.67□□□□□ -0.38
LIMS3-203ENST00000480744 ANXA2P07355 339 aaKnown RBP12.67□□□□□ -0.38
LIMS3-203ENST00000480744 SFTPBP07988 381 aa12.67□□□□□ -0.38
LIMS3-203ENST00000480744 CLUP10909 449 aa12.67□□□□□ -0.38
LIMS3-203ENST00000480744 SPI1P17947 270 aa12.67□□□□□ -0.38
LIMS3-203ENST00000480744 OMGP23515 440 aa12.67□□□□□ -0.38
LIMS3-203ENST00000480744 NPY4RP50391 375 aa12.67□□□□□ -0.38
LIMS3-203ENST00000480744 CD276Q5ZPR3 534 aa12.67□□□□□ -0.38
LIMS3-203ENST00000480744 RUSC1-AS1Q66K80 236 aa12.67□□□□□ -0.38
LIMS3-203ENST00000480744 OR2T33Q8NG76 320 aa12.67□□□□□ -0.38
LIMS3-203ENST00000480744 OR4Q3Q8NH05 313 aa12.67□□□□□ -0.38
LIMS3-203ENST00000480744 RASSF4Q9H2L5 321 aa12.67□□□□□ -0.38
LIMS3-203ENST00000480744 TRIM36Q9NQ86 728 aa12.67□□□□□ -0.38
LIMS3-203ENST00000480744 BAIAP2Q9UQB8 552 aa12.67□□□□□ -0.38
LIMS3-203ENST00000480744 SAMHD1Q9Y3Z3 626 aaKnown RBP12.67□□□□□ -0.38
LIMS3-203ENST00000480744 TRAV38-1A0A0B4J264 116 aa12.66□□□□□ -0.38
LIMS3-203ENST00000480744 OOEPA6NGQ2 149 aa12.66□□□□□ -0.38
LIMS3-203ENST00000480744 RIIAD1A6NNX1 92 aa12.66□□□□□ -0.38
LIMS3-203ENST00000480744 ANKRD30BLA7E2S9 258 aa12.66□□□□□ -0.38
LIMS3-203ENST00000480744 XRCC2O43543 280 aa12.66□□□□□ -0.38
LIMS3-203ENST00000480744 TOX4O94842 621 aa12.66□□□□□ -0.38
LIMS3-203ENST00000480744 IFNGP01579 166 aa12.66□□□□□ -0.38
LIMS3-203ENST00000480744 GYPAP02724 150 aa12.66□□□□□ -0.38
LIMS3-203ENST00000480744 MDKP21741 143 aaPredicted RBP12.66□□□□□ -0.38
LIMS3-203ENST00000480744 HSD11B1P28845 292 aa12.66□□□□□ -0.38
LIMS3-203ENST00000480744 CFHR2P36980 270 aa12.66□□□□□ -0.38
LIMS3-203ENST00000480744 MAGEA2P43356 314 aa12.66□□□□□ -0.38
LIMS3-203ENST00000480744 CX3CR1P49238 355 aa12.66□□□□□ -0.38
LIMS3-203ENST00000480744 SLC25A1P53007 311 aa12.66□□□□□ -0.38
LIMS3-203ENST00000480744 MZT1Q08AG7 82 aa12.66□□□□□ -0.38
LIMS3-203ENST00000480744 POU4F2Q12837 409 aa12.66□□□□□ -0.38
LIMS3-203ENST00000480744 EIF2B1Q14232 305 aaKnown RBP12.66□□□□□ -0.38
LIMS3-203ENST00000480744 TRIM25Q14258 630 aaKnown RBP12.66□□□□□ -0.38
LIMS3-203ENST00000480744 TIGD6Q17RP2 521 aa12.66□□□□□ -0.38
LIMS3-203ENST00000480744 PRR31Q5SQ13 230 aa12.66□□□□□ -0.38
LIMS3-203ENST00000480744 C16orf87Q6PH81 154 aa12.66□□□□□ -0.38
LIMS3-203ENST00000480744 SPERTQ8NA61 448 aa12.66□□□□□ -0.38
LIMS3-203ENST00000480744 PLPP7Q8NBV4 271 aa12.66□□□□□ -0.38
LIMS3-203ENST00000480744 OR8S1Q8NH09 359 aa12.66□□□□□ -0.38
LIMS3-203ENST00000480744 TMIGD2Q96BF3 282 aa12.66□□□□□ -0.38
LIMS3-203ENST00000480744 OTULINQ96BN8 352 aa12.66□□□□□ -0.38
LIMS3-203ENST00000480744 ASB9Q96DX5 294 aa12.66□□□□□ -0.38
LIMS3-203ENST00000480744 CADM1Q9BY67 442 aaKnown RBP12.66□□□□□ -0.38
LIMS3-203ENST00000480744 NMNAT2Q9BZQ4 307 aa12.66□□□□□ -0.38
LIMS3-203ENST00000480744 OPA3Q9H6K4 179 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms