RNA–Protein interactions for RNA: ENST00000479596.5

CCNL1-222, Transcript of cyclin L1, humanhuman

TSL 3

Gene CCNL1, Length 883 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-222ENST00000479596 CX3CR1P49238 355 aa12.56□□□□□ -0.4
CCNL1-222ENST00000479596 GRB2P62993 217 aaKnown RBP12.56□□□□□ -0.4
CCNL1-222ENST00000479596 CBX1P83916 185 aa12.56□□□□□ -0.4
CCNL1-222ENST00000479596 CDK5Q00535 292 aa12.56□□□□□ -0.4
CCNL1-222ENST00000479596 TAF13Q15543 124 aa12.56□□□□□ -0.4
CCNL1-222ENST00000479596 ESCO2Q56NI9 601 aa12.56□□□□□ -0.4
CCNL1-222ENST00000479596 SPATA24Q86W54 205 aa12.56□□□□□ -0.4
CCNL1-222ENST00000479596 C19orf18Q8NEA5 215 aa12.56□□□□□ -0.4
CCNL1-222ENST00000479596 OR56B2PQ8NGI1 322 aa12.56□□□□□ -0.4
CCNL1-222ENST00000479596 ERGIC1Q969X5 290 aa12.56□□□□□ -0.4
CCNL1-222ENST00000479596 SSBP3Q9BWW4 388 aaPredicted RBP12.56□□□□□ -0.4
CCNL1-222ENST00000479596 SLC22A4Q9H015 551 aa12.56□□□□□ -0.4
CCNL1-222ENST00000479596 ESM1Q9NQ30 184 aa12.56□□□□□ -0.4
CCNL1-222ENST00000479596 PPIAL4AQ9Y536 164 aa12.56□□□□□ -0.4
CCNL1-222ENST00000479596 N6AMT1Q9Y5N5 214 aa12.56□□□□□ -0.4
CCNL1-222ENST00000479596 GGT3PA6NGU5 568 aa12.55□□□□□ -0.4
CCNL1-222ENST00000479596 GMDSO60547 372 aa12.55□□□□□ -0.4
CCNL1-222ENST00000479596 DNAJC8O75937 253 aaPredicted RBP12.55□□□□□ -0.4
CCNL1-222ENST00000479596 CPT2P23786 658 aa12.55□□□□□ -0.4
CCNL1-222ENST00000479596 CD80P33681 288 aa12.55□□□□□ -0.4
CCNL1-222ENST00000479596 PAX8Q06710 450 aa12.55□□□□□ -0.4
CCNL1-222ENST00000479596 KLHL12Q53G59 568 aa12.55□□□□□ -0.4
CCNL1-222ENST00000479596 PLBD1Q6P4A8 553 aa12.55□□□□□ -0.4
CCNL1-222ENST00000479596 LYPD2Q6UXB3 125 aa12.55□□□□□ -0.4
CCNL1-222ENST00000479596 SLC16A9Q7RTY1 509 aa12.55□□□□□ -0.4
CCNL1-222ENST00000479596 C1orf87Q8N0U7 546 aa12.55□□□□□ -0.4
CCNL1-222ENST00000479596 BBS1Q8NFJ9 593 aa12.55□□□□□ -0.4
CCNL1-222ENST00000479596 C22orf15Q8WYQ4 148 aa12.55□□□□□ -0.4
CCNL1-222ENST00000479596 OTULINQ96BN8 352 aa12.55□□□□□ -0.4
CCNL1-222ENST00000479596 SGK3Q96BR1 496 aa12.55□□□□□ -0.4
CCNL1-222ENST00000479596 ZMYND19Q96E35 227 aaPredicted RBP12.55□□□□□ -0.4
CCNL1-222ENST00000479596 CADM1Q9BY67 442 aaKnown RBP12.55□□□□□ -0.4
CCNL1-222ENST00000479596 OR51V1Q9H2C8 321 aa12.55□□□□□ -0.4
CCNL1-222ENST00000479596 OPA3Q9H6K4 179 aa12.55□□□□□ -0.4
CCNL1-222ENST00000479596 ZNF319Q9P2F9 582 aa12.55□□□□□ -0.4
CCNL1-222ENST00000479596 DNAJB9Q9UBS3 223 aa12.55□□□□□ -0.4
CCNL1-222ENST00000479596 MIOXQ9UGB7 285 aa12.55□□□□□ -0.4
CCNL1-222ENST00000479596 OR5V1Q9UGF6 321 aa12.55□□□□□ -0.4
CCNL1-222ENST00000479596 AUP1Q9Y679 476 aa12.55□□□□□ -0.4
CCNL1-222ENST00000479596 hCG_38984A0A1B0GV85 526 aa12.54□□□□□ -0.4
CCNL1-222ENST00000479596 XRCC2O43543 280 aa12.54□□□□□ -0.4
CCNL1-222ENST00000479596 SELENOFO60613 162 aa12.54□□□□□ -0.4
CCNL1-222ENST00000479596 E2F6O75461 281 aa12.54□□□□□ -0.4
CCNL1-222ENST00000479596 SLC2A5P22732 501 aa12.54□□□□□ -0.4
CCNL1-222ENST00000479596 SLC15A1P46059 708 aa12.54□□□□□ -0.4
CCNL1-222ENST00000479596 ZNF121P58317 390 aaPredicted RBP12.54□□□□□ -0.4
CCNL1-222ENST00000479596 FAM3AP98173 230 aa12.54□□□□□ -0.4
CCNL1-222ENST00000479596 TMEM236Q5W0B7 351 aa12.54□□□□□ -0.4
CCNL1-222ENST00000479596 ZNF841Q6ZN19 808 aa12.54□□□□□ -0.4
CCNL1-222ENST00000479596 ZDHHC22Q8N966 263 aa12.54□□□□□ -0.4
CCNL1-222ENST00000479596 OR11L1Q8NGX0 322 aa12.54□□□□□ -0.4
CCNL1-222ENST00000479596 UTP4Q969X6 686 aaKnown RBP12.54□□□□□ -0.4
CCNL1-222ENST00000479596 NEIL1Q96FI4 390 aaPredicted RBP12.54□□□□□ -0.4
CCNL1-222ENST00000479596 SUCNR1Q9BXA5 334 aa12.54□□□□□ -0.4
CCNL1-222ENST00000479596 TOR3AQ9H497 397 aa12.54□□□□□ -0.4
CCNL1-222ENST00000479596 SLC25A19Q9HC21 320 aa12.54□□□□□ -0.4
CCNL1-222ENST00000479596 DNAJC27Q9NZQ0 273 aa12.54□□□□□ -0.4
CCNL1-222ENST00000479596 KLHDC2Q9Y2U9 406 aa12.54□□□□□ -0.4
CCNL1-222ENST00000479596 NOP16Q9Y3C1 178 aaKnown RBP12.54□□□□□ -0.4
CCNL1-222ENST00000479596 IGHV2-70DA0A0C4DH43 119 aa12.53□□□□□ -0.4
CCNL1-222ENST00000479596 PRR23D1E9PI22 279 aaPredicted RBP12.53□□□□□ -0.4
CCNL1-222ENST00000479596 TNFRSF13BO14836 293 aaPredicted RBP12.53□□□□□ -0.4
CCNL1-222ENST00000479596 GSC2O15499 205 aa12.53□□□□□ -0.4
CCNL1-222ENST00000479596 TBX1O43435 398 aa12.53□□□□□ -0.4
CCNL1-222ENST00000479596 ANXA2P07355 339 aaKnown RBP12.53□□□□□ -0.4
CCNL1-222ENST00000479596 PRR23D2P0DMB1 279 aaPredicted RBP12.53□□□□□ -0.4
CCNL1-222ENST00000479596 ANXA8P13928 327 aa12.53□□□□□ -0.4
CCNL1-222ENST00000479596 IRF2P14316 349 aa12.53□□□□□ -0.4
CCNL1-222ENST00000479596 PAICSP22234 425 aaKnown RBP12.53□□□□□ -0.4
CCNL1-222ENST00000479596 HSD11B1P28845 292 aa12.53□□□□□ -0.4
CCNL1-222ENST00000479596 PSMB10P40306 273 aa12.53□□□□□ -0.4
CCNL1-222ENST00000479596 PITPNBP48739 271 aa12.53□□□□□ -0.4
CCNL1-222ENST00000479596 GNB2P62879 340 aa12.53□□□□□ -0.4
CCNL1-222ENST00000479596 ARMCX4Q5H9R4 360 aa12.53□□□□□ -0.4
CCNL1-222ENST00000479596 DCDC5Q6ZRR9 648 aa12.53□□□□□ -0.4
CCNL1-222ENST00000479596 ZNF826PQ6ZT77 177 aa12.53□□□□□ -0.4
CCNL1-222ENST00000479596 FAM57BQ71RH2 274 aa12.53□□□□□ -0.4
CCNL1-222ENST00000479596 RHOUQ7L0Q8 258 aa12.53□□□□□ -0.4
CCNL1-222ENST00000479596 SHFQ7M4L6 423 aa12.53□□□□□ -0.4
CCNL1-222ENST00000479596 WDR86Q86TI4 376 aa12.53□□□□□ -0.4
CCNL1-222ENST00000479596 CPOQ8IVL8 374 aa12.53□□□□□ -0.4
CCNL1-222ENST00000479596 BPIFB2Q8N4F0 458 aa12.53□□□□□ -0.4
CCNL1-222ENST00000479596 PLPP7Q8NBV4 271 aa12.53□□□□□ -0.4
CCNL1-222ENST00000479596 OR8B3Q8NGG8 313 aa12.53□□□□□ -0.4
CCNL1-222ENST00000479596 OTOSQ8NHW6 89 aa12.53□□□□□ -0.4
CCNL1-222ENST00000479596 FAM216AQ8WUB2 273 aa12.53□□□□□ -0.4
CCNL1-222ENST00000479596 REEP6Q96HR9 211 aa12.53□□□□□ -0.4
CCNL1-222ENST00000479596 OR8B2Q96RD0 313 aa12.53□□□□□ -0.4
CCNL1-222ENST00000479596 PPP1R3EQ9H7J1 279 aa12.53□□□□□ -0.4
CCNL1-222ENST00000479596 YY1AP1Q9H869 796 aa12.53□□□□□ -0.4
CCNL1-222ENST00000479596 FN3KRPQ9HA64 309 aa12.53□□□□□ -0.4
CCNL1-222ENST00000479596 RNF7Q9UBF6 113 aa12.53□□□□□ -0.4
CCNL1-222ENST00000479596 CTSZQ9UBR2 303 aa12.53□□□□□ -0.4
CCNL1-222ENST00000479596 ZNF69Q9UC07 566 aa12.53□□□□□ -0.4
CCNL1-222ENST00000479596 NUP50Q9UKX7 468 aa12.53□□□□□ -0.4
CCNL1-222ENST00000479596 NBEAL1Q6ZS30 2694 aa12.52□□□□□ -0.41
CCNL1-222ENST00000479596 PRODHO43272 600 aa12.52□□□□□ -0.41
CCNL1-222ENST00000479596 TIPRLO75663 272 aa12.52□□□□□ -0.41
CCNL1-222ENST00000479596 HMGN1P05114 100 aa12.52□□□□□ -0.41
CCNL1-222ENST00000479596 IGHV4-38-2P0DP08 117 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms