RNA–Protein interactions for RNA: ENST00000479414.1

CCDC58-204, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-204ENST00000479414 FAM122BQ7Z309 247 aa2.78□□□□□ -1.96
CCDC58-204ENST00000479414 LRRC75AQ8NAA5 344 aa2.78□□□□□ -1.96
CCDC58-204ENST00000479414 GATSQ8NAP1 163 aa2.78□□□□□ -1.96
CCDC58-204ENST00000479414 OR13G1Q8NGZ3 307 aa2.78□□□□□ -1.96
CCDC58-204ENST00000479414 KCNS1Q96KK3 526 aa2.78□□□□□ -1.96
CCDC58-204ENST00000479414 PIGUQ9H490 435 aa2.78□□□□□ -1.96
CCDC58-204ENST00000479414 RRAGDQ9NQL2 400 aaPredicted RBP2.78□□□□□ -1.96
CCDC58-204ENST00000479414 TUBG2Q9NRH3 451 aa2.78□□□□□ -1.96
CCDC58-204ENST00000479414 YARS2Q9Y2Z4 477 aaKnown RBP2.78□□□□□ -1.96
CCDC58-204ENST00000479414 SHANK1Q9Y566 2161 aa2.78□□□□□ -1.96
CCDC58-204ENST00000479414 IGHV3OR16-9A0A0B4J2B5 98 aa2.77□□□□□ -1.97
CCDC58-204ENST00000479414 IGHV7-4-1A0A0J9YVY3 117 aa2.77□□□□□ -1.97
CCDC58-204ENST00000479414 ANKRD65E5RJM6 399 aa2.77□□□□□ -1.97
CCDC58-204ENST00000479414 H7C0C1 242 aa2.77□□□□□ -1.97
CCDC58-204ENST00000479414 SLC19A2O60779 497 aa2.77□□□□□ -1.97
CCDC58-204ENST00000479414 TDP2O95551 362 aa2.77□□□□□ -1.97
CCDC58-204ENST00000479414 IGHV3-11P01762 117 aa2.77□□□□□ -1.97
CCDC58-204ENST00000479414 IL4P05112 153 aa2.77□□□□□ -1.97
CCDC58-204ENST00000479414 GGT2P36268 569 aa2.77□□□□□ -1.97
CCDC58-204ENST00000479414 MYCNOSP40205 109 aa2.77□□□□□ -1.97
CCDC58-204ENST00000479414 TNFSF9P41273 254 aa2.77□□□□□ -1.97
CCDC58-204ENST00000479414 PPICP45877 212 aa2.77□□□□□ -1.97
CCDC58-204ENST00000479414 SLC39A6Q13433 755 aa2.77□□□□□ -1.97
CCDC58-204ENST00000479414 RPEL1Q2QD12 228 aa2.77□□□□□ -1.97
CCDC58-204ENST00000479414 ZNF829Q3KNS6 432 aaPredicted RBP2.77□□□□□ -1.97
CCDC58-204ENST00000479414 ZNF101Q8IZC7 436 aa2.77□□□□□ -1.97
CCDC58-204ENST00000479414 OR1J4Q8NGS1 313 aa2.77□□□□□ -1.97
CCDC58-204ENST00000479414 TBL1YQ9BQ87 522 aa2.77□□□□□ -1.97
CCDC58-204ENST00000479414 HIVEP2P31629 2446 aa2.77□□□□□ -1.97
CCDC58-204ENST00000479414 SCELO95171 688 aa2.76□□□□□ -1.97
CCDC58-204ENST00000479414 FGFR1OPO95684 399 aaKnown RBP2.76□□□□□ -1.97
CCDC58-204ENST00000479414 KRT16P08779 473 aa2.76□□□□□ -1.97
CCDC58-204ENST00000479414 TALDO1P37837 337 aa2.76□□□□□ -1.97
CCDC58-204ENST00000479414 CMC4P56277 68 aaPredicted RBP2.76□□□□□ -1.97
CCDC58-204ENST00000479414 PNOCQ13519 176 aa2.76□□□□□ -1.97
CCDC58-204ENST00000479414 TEX30Q5JUR7 227 aa2.76□□□□□ -1.97
CCDC58-204ENST00000479414 AP1ARQ63HQ0 302 aa2.76□□□□□ -1.97
CCDC58-204ENST00000479414 STUMQ69YW2 141 aa2.76□□□□□ -1.97
CCDC58-204ENST00000479414 ZNF547Q8IVP9 402 aa2.76□□□□□ -1.97
CCDC58-204ENST00000479414 VKORC1L1Q8N0U8 176 aa2.76□□□□□ -1.97
CCDC58-204ENST00000479414 TMEM105Q8N8V8 129 aa2.76□□□□□ -1.97
CCDC58-204ENST00000479414 OR5T1Q8NG75 326 aa2.76□□□□□ -1.97
CCDC58-204ENST00000479414 OR4M1Q8NGD0 313 aa2.76□□□□□ -1.97
CCDC58-204ENST00000479414 RAB1CQ92928 201 aa2.76□□□□□ -1.97
CCDC58-204ENST00000479414 CPNE4Q96A23 557 aaPredicted RBP2.76□□□□□ -1.97
CCDC58-204ENST00000479414 HAUS1Q96CS2 278 aa2.76□□□□□ -1.97
CCDC58-204ENST00000479414 BTN2A3PQ96KV6 586 aa2.76□□□□□ -1.97
CCDC58-204ENST00000479414 MTG1Q9BT17 334 aaPredicted RBP2.76□□□□□ -1.97
CCDC58-204ENST00000479414 RSG1Q9BU20 258 aa2.76□□□□□ -1.97
CCDC58-204ENST00000479414 RBFOX1Q9NWB1 397 aaKnown RBP2.76□□□□□ -1.97
CCDC58-204ENST00000479414 C21orf62Q9NYP8 219 aa2.76□□□□□ -1.97
CCDC58-204ENST00000479414 C2orf16Q68DN1 1984 aa2.76□□□□□ -1.97
CCDC58-204ENST00000479414 CENPVL3A0A0U1RRI6 287 aa2.75□□□□□ -1.97
CCDC58-204ENST00000479414 LRRIQ4A6NIV6 560 aa2.75□□□□□ -1.97
CCDC58-204ENST00000479414 SUPT3HB4E1H0 165 aa2.75□□□□□ -1.97
CCDC58-204ENST00000479414 GOLGA8TH3BQL2 631 aa2.75□□□□□ -1.97
CCDC58-204ENST00000479414 TNFRSF11BO00300 401 aa2.75□□□□□ -1.97
CCDC58-204ENST00000479414 SLC16A7O60669 478 aa2.75□□□□□ -1.97
CCDC58-204ENST00000479414 TGM6O95932 706 aa2.75□□□□□ -1.97
CCDC58-204ENST00000479414 GUSBP11Q6P575 273 aa2.75□□□□□ -1.97
CCDC58-204ENST00000479414 MIR7-3HGQ8N6C7 128 aa2.75□□□□□ -1.97
CCDC58-204ENST00000479414 LRRC52Q8N7C0 313 aa2.75□□□□□ -1.97
CCDC58-204ENST00000479414 OR10G6Q8NH81 332 aa2.75□□□□□ -1.97
CCDC58-204ENST00000479414 CA5BP1Q8WTZ4 195 aa2.75□□□□□ -1.97
CCDC58-204ENST00000479414 RTN4IP1Q8WWV3 396 aaPredicted RBP2.75□□□□□ -1.97
CCDC58-204ENST00000479414 ZNF717Q9BY31 904 aaPredicted RBP2.75□□□□□ -1.97
CCDC58-204ENST00000479414 EXOSC4Q9NPD3 245 aaKnown RBP2.75□□□□□ -1.97
CCDC58-204ENST00000479414 PXMP2Q9NR77 195 aa2.75□□□□□ -1.97
CCDC58-204ENST00000479414 CBY1Q9Y3M2 126 aa2.75□□□□□ -1.97
CCDC58-204ENST00000479414 WDR19Q8NEZ3 1342 aa2.74□□□□□ -1.97
CCDC58-204ENST00000479414 AKR7A2O43488 359 aa2.74□□□□□ -1.97
CCDC58-204ENST00000479414 ASGR1P07306 291 aa2.74□□□□□ -1.97
CCDC58-204ENST00000479414 PRLHRP49683 370 aa2.74□□□□□ -1.97
CCDC58-204ENST00000479414 RAD51Q06609 339 aa2.74□□□□□ -1.97
CCDC58-204ENST00000479414 PPIDQ08752 370 aaKnown RBP2.74□□□□□ -1.97
CCDC58-204ENST00000479414 IL18Q14116 193 aa2.74□□□□□ -1.97
CCDC58-204ENST00000479414 RTL4Q6ZR62 310 aa2.74□□□□□ -1.97
CCDC58-204ENST00000479414 APRG1Q8IVJ8 170 aa2.74□□□□□ -1.97
CCDC58-204ENST00000479414 SPANXA2-OT1Q8N9U9 137 aa2.74□□□□□ -1.97
CCDC58-204ENST00000479414 ST20-AS1Q8NBB2 130 aa2.74□□□□□ -1.97
CCDC58-204ENST00000479414 OR52K2Q8NGK3 314 aa2.74□□□□□ -1.97
CCDC58-204ENST00000479414 AGR3Q8TD06 166 aa2.74□□□□□ -1.97
CCDC58-204ENST00000479414 RXFP4Q8TDU9 374 aa2.74□□□□□ -1.97
CCDC58-204ENST00000479414 PHF10Q8WUB8 498 aaKnown RBP2.74□□□□□ -1.97
CCDC58-204ENST00000479414 APH1AQ96BI3 265 aa2.74□□□□□ -1.97
CCDC58-204ENST00000479414 SULT4A1Q9BR01 284 aa2.74□□□□□ -1.97
CCDC58-204ENST00000479414 NAA50Q9GZZ1 169 aaKnown RBP2.74□□□□□ -1.97
CCDC58-204ENST00000479414 DHX35Q9H5Z1 703 aaKnown RBP2.74□□□□□ -1.97
CCDC58-204ENST00000479414 PRSS16Q9NQE7 514 aa2.74□□□□□ -1.97
CCDC58-204ENST00000479414 FARSAQ9Y285 508 aaKnown RBP2.74□□□□□ -1.97
CCDC58-204ENST00000479414 IGHV3-49A0A0A0MS15 119 aa2.73□□□□□ -1.97
CCDC58-204ENST00000479414 BTNL10A8MVZ5 291 aa2.73□□□□□ -1.97
CCDC58-204ENST00000479414 CASQ2O14958 399 aaPredicted RBP2.73□□□□□ -1.97
CCDC58-204ENST00000479414 IGLV2-8P01709 118 aa2.73□□□□□ -1.97
CCDC58-204ENST00000479414 TPM2P07951 284 aa2.73□□□□□ -1.97
CCDC58-204ENST00000479414 RNASE2P10153 161 aaKnown RBP2.73□□□□□ -1.97
CCDC58-204ENST00000479414 IL1RNP18510 177 aa2.73□□□□□ -1.97
CCDC58-204ENST00000479414 ATP6V0D1P61421 351 aa2.73□□□□□ -1.97
CCDC58-204ENST00000479414 SLC25A35Q3KQZ1 300 aa2.73□□□□□ -1.97
CCDC58-204ENST00000479414 KDM4DQ6B0I6 523 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms