RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 ZNF620Q6ZNG0 422 aa10.98□□□□□ -0.65
VCL-205ENST00000478896 ST8SIA4Q92187 359 aa10.98□□□□□ -0.65
VCL-205ENST00000478896 DYRK2Q92630 601 aa10.98□□□□□ -0.65
VCL-205ENST00000478896 UBE2FQ969M7 185 aa10.98□□□□□ -0.65
VCL-205ENST00000478896 CMTM5Q96DZ9 223 aa10.98□□□□□ -0.65
VCL-205ENST00000478896 FUZQ9BT04 418 aa10.98□□□□□ -0.65
VCL-205ENST00000478896 CCDC134Q9H6E4 229 aa10.98□□□□□ -0.65
VCL-205ENST00000478896 SMURF1Q9HCE7 757 aa10.98□□□□□ -0.65
VCL-205ENST00000478896 MRPL15Q9P015 296 aaKnown RBP10.98□□□□□ -0.65
VCL-205ENST00000478896 PDP1Q9P0J1 537 aaPredicted RBP10.98□□□□□ -0.65
VCL-205ENST00000478896 IGHV1-69DA0A0B4J2H0 117 aa10.97□□□□□ -0.65
VCL-205ENST00000478896 TVP23AA6NH52 213 aa10.97□□□□□ -0.65
VCL-205ENST00000478896 BHLHE40O14503 412 aa10.97□□□□□ -0.65
VCL-205ENST00000478896 IDH3BO43837 385 aa10.97□□□□□ -0.65
VCL-205ENST00000478896 IGHV1-69P01742 117 aa10.97□□□□□ -0.65
VCL-205ENST00000478896 FABP3P05413 133 aa10.97□□□□□ -0.65
VCL-205ENST00000478896 PYCR1P32322 319 aa10.97□□□□□ -0.65
VCL-205ENST00000478896 RPL15P61313 204 aaKnown RBP10.97□□□□□ -0.65
VCL-205ENST00000478896 ARF6P62330 175 aa10.97□□□□□ -0.65
VCL-205ENST00000478896 DRAM2Q6UX65 266 aa10.97□□□□□ -0.65
VCL-205ENST00000478896 ZNF826PQ6ZT77 177 aa10.97□□□□□ -0.65
VCL-205ENST00000478896 BTN2A1Q7KYR7 527 aa10.97□□□□□ -0.65
VCL-205ENST00000478896 DCXRQ7Z4W1 244 aa10.97□□□□□ -0.65
VCL-205ENST00000478896 PDZD9Q8IXQ8 264 aa10.97□□□□□ -0.65
VCL-205ENST00000478896 SPERTQ8NA61 448 aa10.97□□□□□ -0.65
VCL-205ENST00000478896 CYB561A3Q8NBI2 242 aa10.97□□□□□ -0.65
VCL-205ENST00000478896 PLPP7Q8NBV4 271 aa10.97□□□□□ -0.65
VCL-205ENST00000478896 OR56B2PQ8NGI1 322 aa10.97□□□□□ -0.65
VCL-205ENST00000478896 OR2T4Q8NH00 348 aa10.97□□□□□ -0.65
VCL-205ENST00000478896 OR8S1Q8NH09 359 aa10.97□□□□□ -0.65
VCL-205ENST00000478896 GNPDA2Q8TDQ7 276 aa10.97□□□□□ -0.65
VCL-205ENST00000478896 PYURFQ96I23 114 aa10.97□□□□□ -0.65
VCL-205ENST00000478896 CITED1Q99966 193 aa10.97□□□□□ -0.65
VCL-205ENST00000478896 RASSF4Q9H2L5 321 aa10.97□□□□□ -0.65
VCL-205ENST00000478896 MMP27Q9H306 513 aa10.97□□□□□ -0.65
VCL-205ENST00000478896 OPA3Q9H6K4 179 aa10.97□□□□□ -0.65
VCL-205ENST00000478896 C14orf119Q9NWQ9 140 aa10.97□□□□□ -0.65
VCL-205ENST00000478896 MAGEL2Q9UJ55 1249 aa10.97□□□□□ -0.65
VCL-205ENST00000478896 RNF114Q9Y508 228 aa10.97□□□□□ -0.65
VCL-205ENST00000478896 IGHV3OR15-7A0A075B7D8 119 aa10.96□□□□□ -0.65
VCL-205ENST00000478896 ANKRD30BLA7E2S9 258 aa10.96□□□□□ -0.65
VCL-205ENST00000478896 DVL1O14640 695 aa10.96□□□□□ -0.65
VCL-205ENST00000478896 TBX1O43435 398 aa10.96□□□□□ -0.65
VCL-205ENST00000478896 XRCC2O43543 280 aa10.96□□□□□ -0.65
VCL-205ENST00000478896 PTBP3O95758 552 aaKnown RBP10.96□□□□□ -0.65
VCL-205ENST00000478896 SPARCP09486 303 aa10.96□□□□□ -0.65
VCL-205ENST00000478896 SLC2A1P11166 492 aa10.96□□□□□ -0.65
VCL-205ENST00000478896 GRK5P34947 590 aa10.96□□□□□ -0.65
VCL-205ENST00000478896 GSSP48637 474 aa10.96□□□□□ -0.65
VCL-205ENST00000478896 PRKXP51817 358 aa10.96□□□□□ -0.65
VCL-205ENST00000478896 POU4F2Q12837 409 aa10.96□□□□□ -0.65
VCL-205ENST00000478896 TSPAN31Q12999 210 aa10.96□□□□□ -0.65
VCL-205ENST00000478896 OCLNQ16625 522 aa10.96□□□□□ -0.65
VCL-205ENST00000478896 HSP90B2PQ58FF3 399 aa10.96□□□□□ -0.65
VCL-205ENST00000478896 RPL13AP3Q6NVV1 102 aa10.96□□□□□ -0.65
VCL-205ENST00000478896 LYPD4Q6UWN0 246 aa10.96□□□□□ -0.65
VCL-205ENST00000478896 FAM90A1Q86YD7 464 aa10.96□□□□□ -0.65
VCL-205ENST00000478896 GCSAMQ8N6F7 178 aa10.96□□□□□ -0.65
VCL-205ENST00000478896 OR51L1Q8NGJ5 315 aa10.96□□□□□ -0.65
VCL-205ENST00000478896 SIRPDQ9H106 197 aa10.96□□□□□ -0.65
VCL-205ENST00000478896 EGLN3Q9H6Z9 239 aa10.96□□□□□ -0.65
VCL-205ENST00000478896 GORASP2Q9H8Y8 452 aa10.96□□□□□ -0.65
VCL-205ENST00000478896 CENPMQ9NSP4 180 aa10.96□□□□□ -0.65
VCL-205ENST00000478896 COMMD3-BMI1R4GMX3 469 aa10.96□□□□□ -0.65
VCL-205ENST00000478896 A0A0U1RQK1 487 aa10.95□□□□□ -0.66
VCL-205ENST00000478896 BTBD17A6NE02 478 aa10.95□□□□□ -0.66
VCL-205ENST00000478896 ZNF878C9JN71 531 aa10.95□□□□□ -0.66
VCL-205ENST00000478896 GPR137BO60478 399 aa10.95□□□□□ -0.66
VCL-205ENST00000478896 ECDO95905 644 aaPredicted RBP10.95□□□□□ -0.66
VCL-205ENST00000478896 IGHV4-59P01825 116 aa10.95□□□□□ -0.66
VCL-205ENST00000478896 SEMG1P04279 462 aa10.95□□□□□ -0.66
VCL-205ENST00000478896 ANOS1P23352 680 aa10.95□□□□□ -0.66
VCL-205ENST00000478896 OTX1P32242 354 aaPredicted RBP10.95□□□□□ -0.66
VCL-205ENST00000478896 PGBD2Q6P3X8 592 aa10.95□□□□□ -0.66
VCL-205ENST00000478896 VMO1Q7Z5L0 202 aa10.95□□□□□ -0.66
VCL-205ENST00000478896 ZDHHC21Q8IVQ6 265 aa10.95□□□□□ -0.66
VCL-205ENST00000478896 OR9Q1Q8NGQ5 310 aa10.95□□□□□ -0.66
VCL-205ENST00000478896 LRRC29Q8WV35 223 aa10.95□□□□□ -0.66
VCL-205ENST00000478896 LRTOMTQ8WZ04 291 aa10.95□□□□□ -0.66
VCL-205ENST00000478896 SLAMF6Q96DU3 332 aa10.95□□□□□ -0.66
VCL-205ENST00000478896 NSMCE2Q96MF7 247 aa10.95□□□□□ -0.66
VCL-205ENST00000478896 KCNJ15Q99712 375 aa10.95□□□□□ -0.66
VCL-205ENST00000478896 DPAGT1Q9H3H5 408 aa10.95□□□□□ -0.66
VCL-205ENST00000478896 TBC1D23Q9NUY8 699 aa10.95□□□□□ -0.66
VCL-205ENST00000478896 ONECUT1Q9UBC0 465 aa10.95□□□□□ -0.66
VCL-205ENST00000478896 CAB39Q9Y376 341 aaPredicted RBP10.95□□□□□ -0.66
VCL-205ENST00000478896 FAM96BQ9Y3D0 163 aa10.95□□□□□ -0.66
VCL-205ENST00000478896 CDH10Q9Y6N8 788 aa10.95□□□□□ -0.66
VCL-205ENST00000478896 A0A1B0GVI7 797 aa10.94□□□□□ -0.66
VCL-205ENST00000478896 C5orf63A6NC05 138 aa10.94□□□□□ -0.66
VCL-205ENST00000478896 ANXA2P07355 339 aaKnown RBP10.94□□□□□ -0.66
VCL-205ENST00000478896 PSKH1P11801 424 aa10.94□□□□□ -0.66
VCL-205ENST00000478896 HSD11B1P28845 292 aa10.94□□□□□ -0.66
VCL-205ENST00000478896 PRDX6P30041 224 aa10.94□□□□□ -0.66
VCL-205ENST00000478896 ENTPD1P49961 510 aa10.94□□□□□ -0.66
VCL-205ENST00000478896 PCK2Q16822 640 aa10.94□□□□□ -0.66
VCL-205ENST00000478896 TIGD6Q17RP2 521 aa10.94□□□□□ -0.66
VCL-205ENST00000478896 MICBQ29980 383 aa10.94□□□□□ -0.66
VCL-205ENST00000478896 CDONQ4KMG0 1287 aa10.94□□□□□ -0.66
VCL-205ENST00000478896 TEX36Q5VZQ5 186 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms