RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 PPIAL4FP0DN26 164 aa2.8□□□□□ -1.96
CDC42BPA-212ENST00000478573 ETS2P15036 469 aa2.8□□□□□ -1.96
CDC42BPA-212ENST00000478573 AK4P27144 223 aaPredicted RBP2.8□□□□□ -1.96
CDC42BPA-212ENST00000478573 CD1CP29017 333 aa2.8□□□□□ -1.96
CDC42BPA-212ENST00000478573 FDFT1P37268 417 aa2.8□□□□□ -1.96
CDC42BPA-212ENST00000478573 CAPZBP47756 277 aa2.8□□□□□ -1.96
CDC42BPA-212ENST00000478573 ATP5OP48047 213 aa2.8□□□□□ -1.96
CDC42BPA-212ENST00000478573 PRLHRP49683 370 aa2.8□□□□□ -1.96
CDC42BPA-212ENST00000478573 ZNF140P52738 457 aaPredicted RBP2.8□□□□□ -1.96
CDC42BPA-212ENST00000478573 CLDN6P56747 220 aa2.8□□□□□ -1.96
CDC42BPA-212ENST00000478573 EIF3EP60228 445 aaKnown RBP2.8□□□□□ -1.96
CDC42BPA-212ENST00000478573 KRTAP10-1P60331 282 aa2.8□□□□□ -1.96
CDC42BPA-212ENST00000478573 CCL7P80098 99 aa2.8□□□□□ -1.96
CDC42BPA-212ENST00000478573 SEMG2Q02383 582 aa2.8□□□□□ -1.96
CDC42BPA-212ENST00000478573 OR5I1Q13606 314 aa2.8□□□□□ -1.96
CDC42BPA-212ENST00000478573 ITIH4Q14624 930 aa2.8□□□□□ -1.96
CDC42BPA-212ENST00000478573 GNMTQ14749 295 aa2.8□□□□□ -1.96
CDC42BPA-212ENST00000478573 SSX2Q16385 188 aa2.8□□□□□ -1.96
CDC42BPA-212ENST00000478573 CASC10Q5T4H9 136 aa2.8□□□□□ -1.96
CDC42BPA-212ENST00000478573 KCTD16Q68DU8 428 aa2.8□□□□□ -1.96
CDC42BPA-212ENST00000478573 C4orf22Q6V702 233 aa2.8□□□□□ -1.96
CDC42BPA-212ENST00000478573 PID1Q7Z2X4 250 aa2.8□□□□□ -1.96
CDC42BPA-212ENST00000478573 PEX26Q7Z412 305 aa2.8□□□□□ -1.96
CDC42BPA-212ENST00000478573 LINC00523Q86TU6 105 aa2.8□□□□□ -1.96
CDC42BPA-212ENST00000478573 CTAGE6Q86UF2 777 aa2.8□□□□□ -1.96
CDC42BPA-212ENST00000478573 NUDCD3Q8IVD9 361 aa2.8□□□□□ -1.96
CDC42BPA-212ENST00000478573 CDH26Q8IXH8 852 aa2.8□□□□□ -1.96
CDC42BPA-212ENST00000478573 UBE2J2Q8N2K1 259 aa2.8□□□□□ -1.96
CDC42BPA-212ENST00000478573 C6orf223Q8N319 242 aa2.8□□□□□ -1.96
CDC42BPA-212ENST00000478573 GPR26Q8NDV2 337 aa2.8□□□□□ -1.96
CDC42BPA-212ENST00000478573 OR9K2Q8NGE7 335 aa2.8□□□□□ -1.96
CDC42BPA-212ENST00000478573 OR10G6Q8NH81 332 aa2.8□□□□□ -1.96
CDC42BPA-212ENST00000478573 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.8□□□□□ -1.96
CDC42BPA-212ENST00000478573 TM4SF19Q96DZ7 209 aa2.8□□□□□ -1.96
CDC42BPA-212ENST00000478573 ALS2CR12Q96Q35 445 aa2.8□□□□□ -1.96
CDC42BPA-212ENST00000478573 TBL1YQ9BQ87 522 aa2.8□□□□□ -1.96
CDC42BPA-212ENST00000478573 RIOK2Q9BVS4 552 aaKnown RBP2.8□□□□□ -1.96
CDC42BPA-212ENST00000478573 DDA1Q9BW61 102 aa2.8□□□□□ -1.96
CDC42BPA-212ENST00000478573 OR51J1Q9H342 316 aa2.8□□□□□ -1.96
CDC42BPA-212ENST00000478573 GOLPH3Q9H4A6 298 aa2.8□□□□□ -1.96
CDC42BPA-212ENST00000478573 PRORYQ9H606 182 aa2.8□□□□□ -1.96
CDC42BPA-212ENST00000478573 SYNDIG1Q9H7V2 258 aa2.8□□□□□ -1.96
CDC42BPA-212ENST00000478573 VPS37BQ9H9H4 285 aa2.8□□□□□ -1.96
CDC42BPA-212ENST00000478573 NMRAL1Q9HBL8 299 aa2.8□□□□□ -1.96
CDC42BPA-212ENST00000478573 THUMPD1Q9NXG2 353 aaKnown RBP2.8□□□□□ -1.96
CDC42BPA-212ENST00000478573 TREM2Q9NZC2 230 aa2.8□□□□□ -1.96
CDC42BPA-212ENST00000478573 CD84Q9UIB8 345 aa2.8□□□□□ -1.96
CDC42BPA-212ENST00000478573 ABCG2Q9UNQ0 655 aa2.8□□□□□ -1.96
CDC42BPA-212ENST00000478573 HYOU1Q9Y4L1 999 aa2.8□□□□□ -1.96
CDC42BPA-212ENST00000478573 PEX16Q9Y5Y5 336 aa2.8□□□□□ -1.96
CDC42BPA-212ENST00000478573 ZFHX4Q86UP3 3567 aa2.8□□□□□ -1.96
CDC42BPA-212ENST00000478573 BSNQ9UPA5 3926 aa2.8□□□□□ -1.96
CDC42BPA-212ENST00000478573 ZGRF1Q86YA3 2104 aa2.8□□□□□ -1.96
CDC42BPA-212ENST00000478573 EML6Q6ZMW3 1958 aa2.8□□□□□ -1.96
CDC42BPA-212ENST00000478573 CFAP47Q6ZTR5 3102 aa2.79□□□□□ -1.96
CDC42BPA-212ENST00000478573 ASPMQ8IZT6 3477 aa2.79□□□□□ -1.96
CDC42BPA-212ENST00000478573 ATMQ13315 3056 aa2.79□□□□□ -1.96
CDC42BPA-212ENST00000478573 IGHV5-10-1A0A0J9YXX1 117 aa2.79□□□□□ -1.96
CDC42BPA-212ENST00000478573 HEATR9A2RTY3 570 aa2.79□□□□□ -1.96
CDC42BPA-212ENST00000478573 BTBD17A6NE02 478 aa2.79□□□□□ -1.96
CDC42BPA-212ENST00000478573 CCDC182A6NF36 153 aa2.79□□□□□ -1.96
CDC42BPA-212ENST00000478573 TLCD2A6NGC4 264 aa2.79□□□□□ -1.96
CDC42BPA-212ENST00000478573 USP27XA6NNY8 438 aa2.79□□□□□ -1.96
CDC42BPA-212ENST00000478573 GOLGA8KD6RF30 607 aa2.79□□□□□ -1.96
CDC42BPA-212ENST00000478573 HAT1O14929 419 aa2.79□□□□□ -1.96
CDC42BPA-212ENST00000478573 POLR3GO15318 223 aaPredicted RBP2.79□□□□□ -1.96
CDC42BPA-212ENST00000478573 MMP23AO75900 390 aa2.79□□□□□ -1.96
CDC42BPA-212ENST00000478573 SRP72O76094 671 aaKnown RBP2.79□□□□□ -1.96
CDC42BPA-212ENST00000478573 SLC25A14O95258 325 aaPredicted RBP2.79□□□□□ -1.96
CDC42BPA-212ENST00000478573 OXSR1O95747 527 aaPredicted RBP2.79□□□□□ -1.96
CDC42BPA-212ENST00000478573 KLK3P07288 261 aaPredicted RBP2.79□□□□□ -1.96
CDC42BPA-212ENST00000478573 RALBP11234 206 aa2.79□□□□□ -1.96
CDC42BPA-212ENST00000478573 ATP1B2P14415 290 aaPredicted RBP2.79□□□□□ -1.96
CDC42BPA-212ENST00000478573 ZNF7P17097 686 aaPredicted RBP2.79□□□□□ -1.96
CDC42BPA-212ENST00000478573 FOXN2P32314 431 aa2.79□□□□□ -1.96
CDC42BPA-212ENST00000478573 CRYBB2P43320 205 aa2.79□□□□□ -1.96
CDC42BPA-212ENST00000478573 KPNA2P52292 529 aaKnown RBP2.79□□□□□ -1.96
CDC42BPA-212ENST00000478573 DLX1P56177 255 aa2.79□□□□□ -1.96
CDC42BPA-212ENST00000478573 CSNK1G2P78368 415 aa2.79□□□□□ -1.96
CDC42BPA-212ENST00000478573 XIAPP98170 497 aa2.79□□□□□ -1.96
CDC42BPA-212ENST00000478573 TLE4Q04727 773 aa2.79□□□□□ -1.96
CDC42BPA-212ENST00000478573 ACVR1Q04771 509 aa2.79□□□□□ -1.96
CDC42BPA-212ENST00000478573 CDH17Q12864 832 aa2.79□□□□□ -1.96
CDC42BPA-212ENST00000478573 GK3PQ14409 553 aa2.79□□□□□ -1.96
CDC42BPA-212ENST00000478573 C16orf72Q14CZ0 275 aa2.79□□□□□ -1.96
CDC42BPA-212ENST00000478573 C1orf100Q5SVJ3 147 aa2.79□□□□□ -1.96
CDC42BPA-212ENST00000478573 PRAMEF5Q5TYX0 476 aa2.79□□□□□ -1.96
CDC42BPA-212ENST00000478573 PRAMEF6Q5VXH4 476 aa2.79□□□□□ -1.96
CDC42BPA-212ENST00000478573 OTPQ5XKR4 325 aa2.79□□□□□ -1.96
CDC42BPA-212ENST00000478573 UQCC3Q6UW78 93 aa2.79□□□□□ -1.96
CDC42BPA-212ENST00000478573 RFLNAQ6ZTI6 216 aa2.79□□□□□ -1.96
CDC42BPA-212ENST00000478573 NANOGNBQ7Z5D8 188 aa2.79□□□□□ -1.96
CDC42BPA-212ENST00000478573 SNX20Q7Z614 316 aa2.79□□□□□ -1.96
CDC42BPA-212ENST00000478573 CROCCP2Q86T23 111 aa2.79□□□□□ -1.96
CDC42BPA-212ENST00000478573 SLC13A5Q86YT5 568 aaPredicted RBP2.79□□□□□ -1.96
CDC42BPA-212ENST00000478573 TRAPPC5Q8IUR0 188 aa2.79□□□□□ -1.96
CDC42BPA-212ENST00000478573 SLC22A9Q8IVM8 553 aa2.79□□□□□ -1.96
CDC42BPA-212ENST00000478573 MMGT1Q8N4V1 131 aa2.79□□□□□ -1.96
CDC42BPA-212ENST00000478573 CCL4L1Q8NHW4 92 aa2.79□□□□□ -1.96
CDC42BPA-212ENST00000478573 BLOC1S5Q8TDH9 187 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms