RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 JCADQ9P266 1359 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 ATP8B3O60423 1300 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 TSPAN11A1L157 253 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 C19orf71A6NCJ1 209 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 SNTNA6NMZ2 147 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 NDUFC2-KCTD14E9PQ53 114 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 NUPL2O15504 423 aaKnown RBP0.25□□□□□ -2.37
HPS3-205ENST00000478525 RAD51CO43502 376 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 TIMM8AO60220 97 aaPredicted RBP0.25□□□□□ -2.37
HPS3-205ENST00000478525 CTNSO60931 367 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 CRTAPO75718 401 aaPredicted RBP0.25□□□□□ -2.37
HPS3-205ENST00000478525 LCA5LO95447 670 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 DIRAS3O95661 229 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 HPRT1P00492 218 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 NRASP01111 189 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 HRASP01112 189 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 KRASP01116 189 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 PTHP01270 115 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 IGHG2P01859 326 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 FGGP02679 453 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 ARG1P05089 322 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 GPX1P07203 203 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 CGB3P0DN86 165 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 THRAP10827 490 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 PTHLHP12272 177 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 KRT13P13646 458 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 GGT1P19440 569 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 KITLGP21583 273 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 MSR1P21757 451 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 PRKACBP22694 351 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 IL32P24001 234 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 PFN2P35080 140 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 GPX4P36969 197 aaPredicted RBP0.25□□□□□ -2.37
HPS3-205ENST00000478525 PPP1CAP62136 330 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 RPS23P62266 143 aaKnown RBP0.25□□□□□ -2.37
HPS3-205ENST00000478525 ATP5G2Q06055 141 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 ILKQ13418 452 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 SS18Q15532 418 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 SSX2Q16385 188 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 PSMD5Q16401 504 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 HADHQ16836 314 aaKnown RBP0.25□□□□□ -2.37
HPS3-205ENST00000478525 SPIN4Q56A73 249 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 ACSBG2Q5FVE4 666 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 C6orf226Q5I0X4 101 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 PDZK1Q5T2W1 519 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 TPTE2P1Q5T6R2 138 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 C9orf135Q5VTT2 229 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 GPR107Q5VW38 600 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 Q6ZSR6 202 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 MBOAT2Q6ZWT7 520 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 LYZL2Q7Z4W2 148 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 RBM45Q8IUH3 476 aaKnown RBP0.25□□□□□ -2.37
HPS3-205ENST00000478525 EGFL6Q8IUX8 553 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 LRRC75A-AS1Q8N1F1 130 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 STK40Q8N2I9 435 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 EIF4E3Q8N5X7 224 aaKnown RBP0.25□□□□□ -2.37
HPS3-205ENST00000478525 ZNF713Q8N859 430 aaPredicted RBP0.25□□□□□ -2.37
HPS3-205ENST00000478525 SLC25A29Q8N8R3 303 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 DNAAF3Q8N9W5 541 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 ZNF738Q8NE65 137 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 OR4M2Q8NGB6 313 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 OR4F6Q8NGB9 312 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 SFXN5Q8TD22 340 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 BLNKQ8WV28 456 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 APH1BQ8WW43 257 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 OTUB2Q96DC9 234 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 SNF8Q96H20 258 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 C16orf45Q96MC5 204 aaPredicted RBP0.25□□□□□ -2.37
HPS3-205ENST00000478525 TCEANC2Q96MN5 208 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 PSKH2Q96QS6 385 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 GPR21Q99679 349 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 TMEM43Q9BTV4 400 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 TRIM62Q9BVG3 475 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 NUDT9Q9BW91 350 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 TSGA10Q9BZW7 698 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 RSPH9Q9H1X1 276 aaPredicted RBP0.25□□□□□ -2.37
HPS3-205ENST00000478525 PORCNQ9H237 461 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 KIR3DX1Q9H7L2 352 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 ZNF442Q9H7R0 627 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 COQ10BQ9H8M1 238 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 RETNQ9HD89 108 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 OR2S2Q9NQN1 319 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 FAM206AQ9NX38 181 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 NAGKQ9UJ70 344 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 RAB22AQ9UL26 194 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 SAR1BQ9Y6B6 198 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 PCDH15Q96QU1 1955 aa0.25□□□□□ -2.37
HPS3-205ENST00000478525 K7ERS5 55 aa0.24□□□□□ -2.37
HPS3-205ENST00000478525 L7N2F9 121 aa0.24□□□□□ -2.37
HPS3-205ENST00000478525 PLPP3O14495 311 aa0.24□□□□□ -2.37
HPS3-205ENST00000478525 NDUFAB1O14561 156 aa0.24□□□□□ -2.37
HPS3-205ENST00000478525 RGS5O15539 181 aa0.24□□□□□ -2.37
HPS3-205ENST00000478525 PEX11AO75192 247 aa0.24□□□□□ -2.37
HPS3-205ENST00000478525 C1orf105O95561 183 aa0.24□□□□□ -2.37
HPS3-205ENST00000478525 CLIC3O95833 236 aa0.24□□□□□ -2.37
HPS3-205ENST00000478525 SERPIND1P05546 499 aa0.24□□□□□ -2.37
HPS3-205ENST00000478525 GZMAP12544 262 aa0.24□□□□□ -2.37
HPS3-205ENST00000478525 ATP1B2P14415 290 aaPredicted RBP0.24□□□□□ -2.37
HPS3-205ENST00000478525 NCF1P14598 390 aaPredicted RBP0.24□□□□□ -2.37
HPS3-205ENST00000478525 ZNF708P17019 499 aa0.24□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms