RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 BRD7Q9NPI1 651 aa11.19□□□□□ -0.62
TOP3A-205ENST00000477508 TMEM100Q9NV29 134 aa11.19□□□□□ -0.62
TOP3A-205ENST00000477508 FAM206AQ9NX38 181 aa11.19□□□□□ -0.62
TOP3A-205ENST00000477508 NUFIP1Q9UHK0 495 aaKnown RBP11.19□□□□□ -0.62
TOP3A-205ENST00000477508 MRM2Q9UI43 246 aaKnown RBP11.19□□□□□ -0.62
TOP3A-205ENST00000477508 SNX5Q9Y5X3 404 aa11.19□□□□□ -0.62
TOP3A-205ENST00000477508 R4GMQ9 66 aa11.19□□□□□ -0.62
TOP3A-205ENST00000477508 A0A1B0GWJ7 208 aa11.18□□□□□ -0.62
TOP3A-205ENST00000477508 ZSCAN5BA6NJL1 495 aa11.18□□□□□ -0.62
TOP3A-205ENST00000477508 PRR32B1ATL7 298 aa11.18□□□□□ -0.62
TOP3A-205ENST00000477508 TPD52L2O43399 206 aaKnown RBP11.18□□□□□ -0.62
TOP3A-205ENST00000477508 SPRY3O43610 288 aa11.18□□□□□ -0.62
TOP3A-205ENST00000477508 IGHV1-46P01743 117 aa11.18□□□□□ -0.62
TOP3A-205ENST00000477508 IGHA1P01876 353 aa11.18□□□□□ -0.62
TOP3A-205ENST00000477508 CD55P08174 381 aa11.18□□□□□ -0.62
TOP3A-205ENST00000477508 GNAO1P09471 354 aa11.18□□□□□ -0.62
TOP3A-205ENST00000477508 ATP6V1B1P15313 513 aa11.18□□□□□ -0.62
TOP3A-205ENST00000477508 DCKP27707 260 aa11.18□□□□□ -0.62
TOP3A-205ENST00000477508 MED21Q13503 144 aa11.18□□□□□ -0.62
TOP3A-205ENST00000477508 GALEQ14376 348 aa11.18□□□□□ -0.62
TOP3A-205ENST00000477508 TMEM255AQ5JRV8 349 aa11.18□□□□□ -0.62
TOP3A-205ENST00000477508 C6orf52Q5T4I8 152 aa11.18□□□□□ -0.62
TOP3A-205ENST00000477508 ZNF684Q5T5D7 378 aa11.18□□□□□ -0.62
TOP3A-205ENST00000477508 LIPNQ5VXI9 398 aa11.18□□□□□ -0.62
TOP3A-205ENST00000477508 KLBQ86Z14 1044 aa11.18□□□□□ -0.62
TOP3A-205ENST00000477508 ZNF786Q8N393 782 aa11.18□□□□□ -0.62
TOP3A-205ENST00000477508 RFLNBQ8N5W9 214 aa11.18□□□□□ -0.62
TOP3A-205ENST00000477508 CSNK2A3Q8NEV1 391 aa11.18□□□□□ -0.62
TOP3A-205ENST00000477508 OR8B12Q8NGG6 310 aa11.18□□□□□ -0.62
TOP3A-205ENST00000477508 OR2AE1Q8NHA4 323 aa11.18□□□□□ -0.62
TOP3A-205ENST00000477508 CNIH3Q8TBE1 160 aa11.18□□□□□ -0.62
TOP3A-205ENST00000477508 HAVCR2Q8TDQ0 301 aa11.18□□□□□ -0.62
TOP3A-205ENST00000477508 FAM168AQ92567 244 aa11.18□□□□□ -0.62
TOP3A-205ENST00000477508 RDH5Q92781 318 aa11.18□□□□□ -0.62
TOP3A-205ENST00000477508 Q96MF0 132 aa11.18□□□□□ -0.62
TOP3A-205ENST00000477508 JAM3Q9BX67 310 aa11.18□□□□□ -0.62
TOP3A-205ENST00000477508 PBOV1Q9GZY1 135 aa11.18□□□□□ -0.62
TOP3A-205ENST00000477508 RASSF4Q9H2L5 321 aa11.18□□□□□ -0.62
TOP3A-205ENST00000477508 MSL2Q9HCI7 577 aa11.18□□□□□ -0.62
TOP3A-205ENST00000477508 FGF20Q9NP95 211 aaPredicted RBP11.18□□□□□ -0.62
TOP3A-205ENST00000477508 DLL4Q9NR61 685 aa11.18□□□□□ -0.62
TOP3A-205ENST00000477508 PLCXD1Q9NUJ7 323 aa11.18□□□□□ -0.62
TOP3A-205ENST00000477508 MRPL15Q9P015 296 aaKnown RBP11.18□□□□□ -0.62
TOP3A-205ENST00000477508 IL19Q9UHD0 177 aa11.18□□□□□ -0.62
TOP3A-205ENST00000477508 EFCAB10A6NFE3 127 aa11.17□□□□□ -0.62
TOP3A-205ENST00000477508 FAM20BO75063 409 aa11.17□□□□□ -0.62
TOP3A-205ENST00000477508 RPSAP08865 295 aaKnown RBP11.17□□□□□ -0.62
TOP3A-205ENST00000477508 TNFRSF1AP19438 455 aa11.17□□□□□ -0.62
TOP3A-205ENST00000477508 CCL8P80075 99 aa11.17□□□□□ -0.62
TOP3A-205ENST00000477508 TNFAIP6P98066 277 aaPredicted RBP11.17□□□□□ -0.62
TOP3A-205ENST00000477508 FAM3AP98173 230 aa11.17□□□□□ -0.62
TOP3A-205ENST00000477508 ZNF85Q03923 595 aa11.17□□□□□ -0.62
TOP3A-205ENST00000477508 MZT1Q08AG7 82 aa11.17□□□□□ -0.62
TOP3A-205ENST00000477508 MRPL28Q13084 256 aaKnown RBP11.17□□□□□ -0.62
TOP3A-205ENST00000477508 SMN1Q16637 294 aaKnown RBP11.17□□□□□ -0.62
TOP3A-205ENST00000477508 TSTQ16762 297 aaKnown RBP11.17□□□□□ -0.62
TOP3A-205ENST00000477508 CDONQ4KMG0 1287 aa11.17□□□□□ -0.62
TOP3A-205ENST00000477508 BCL2L15Q5TBC7 163 aa11.17□□□□□ -0.62
TOP3A-205ENST00000477508 IZUMO2Q6UXV1 221 aa11.17□□□□□ -0.62
TOP3A-205ENST00000477508 SSX6Q7RTT6 188 aa11.17□□□□□ -0.62
TOP3A-205ENST00000477508 OR5AS1Q8N127 324 aa11.17□□□□□ -0.62
TOP3A-205ENST00000477508 SYS1Q8N2H4 156 aa11.17□□□□□ -0.62
TOP3A-205ENST00000477508 ZNF525Q8N782 197 aa11.17□□□□□ -0.62
TOP3A-205ENST00000477508 SPERTQ8NA61 448 aa11.17□□□□□ -0.62
TOP3A-205ENST00000477508 WFDC11Q8NEX6 87 aa11.17□□□□□ -0.62
TOP3A-205ENST00000477508 OR2Z1Q8NG97 314 aa11.17□□□□□ -0.62
TOP3A-205ENST00000477508 OR52I1Q8NGK6 324 aa11.17□□□□□ -0.62
TOP3A-205ENST00000477508 ELMOD3Q96FG2 381 aa11.17□□□□□ -0.62
TOP3A-205ENST00000477508 SIGLEC11Q96RL6 698 aa11.17□□□□□ -0.62
TOP3A-205ENST00000477508 TTTY10Q9BZA0 68 aa11.17□□□□□ -0.62
TOP3A-205ENST00000477508 SAP30LQ9HAJ7 183 aa11.17□□□□□ -0.62
TOP3A-205ENST00000477508 CHCHD3Q9NX63 227 aaKnown RBP11.17□□□□□ -0.62
TOP3A-205ENST00000477508 CNOT2Q9NZN8 540 aaKnown RBP11.17□□□□□ -0.62
TOP3A-205ENST00000477508 ZNF319Q9P2F9 582 aa11.17□□□□□ -0.62
TOP3A-205ENST00000477508 GNG8Q9UK08 70 aa11.17□□□□□ -0.62
TOP3A-205ENST00000477508 OR52A1Q9UKL2 312 aa11.17□□□□□ -0.62
TOP3A-205ENST00000477508 CHD3Q12873 2000 aaKnown RBP11.16□□□□□ -0.62
TOP3A-205ENST00000477508 hCG_38984A0A1B0GV85 526 aa11.16□□□□□ -0.62
TOP3A-205ENST00000477508 C5orf63A6NC05 138 aa11.16□□□□□ -0.62
TOP3A-205ENST00000477508 ANKRD30BLA7E2S9 258 aa11.16□□□□□ -0.62
TOP3A-205ENST00000477508 IFNL4K9M1U5 179 aa11.16□□□□□ -0.62
TOP3A-205ENST00000477508 GMDSO60547 372 aa11.16□□□□□ -0.62
TOP3A-205ENST00000477508 SRSF10O75494 262 aaKnown RBP11.16□□□□□ -0.62
TOP3A-205ENST00000477508 MTRF1O75570 445 aaKnown RBP11.16□□□□□ -0.62
TOP3A-205ENST00000477508 HPXP02790 462 aa11.16□□□□□ -0.62
TOP3A-205ENST00000477508 PIPP12273 146 aaPredicted RBP11.16□□□□□ -0.62
TOP3A-205ENST00000477508 SLC25A16P16260 332 aa11.16□□□□□ -0.62
TOP3A-205ENST00000477508 MYL12AP19105 171 aa11.16□□□□□ -0.62
TOP3A-205ENST00000477508 ACHEP22303 614 aa11.16□□□□□ -0.62
TOP3A-205ENST00000477508 MYF6P23409 242 aa11.16□□□□□ -0.62
TOP3A-205ENST00000477508 GIFP27352 417 aa11.16□□□□□ -0.62
TOP3A-205ENST00000477508 CRYBB2P43320 205 aa11.16□□□□□ -0.62
TOP3A-205ENST00000477508 MAGEB1P43366 347 aa11.16□□□□□ -0.62
TOP3A-205ENST00000477508 MAP2K3P46734 347 aa11.16□□□□□ -0.62
TOP3A-205ENST00000477508 SRP9P49458 86 aaKnown RBP11.16□□□□□ -0.62
TOP3A-205ENST00000477508 GSK3AP49840 483 aa11.16□□□□□ -0.62
TOP3A-205ENST00000477508 TMEM33P57088 247 aa11.16□□□□□ -0.62
TOP3A-205ENST00000477508 OR8B8Q15620 311 aa11.16□□□□□ -0.62
TOP3A-205ENST00000477508 GFOD2Q3B7J2 385 aa11.16□□□□□ -0.62
TOP3A-205ENST00000477508 Q6ZR03 302 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms