RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 ZDHHC8Q9ULC8 765 aa8.22□□□□□ -1.09
HDAC3-208ENST00000476739 GMPPBQ9Y5P6 360 aa8.22□□□□□ -1.09
HDAC3-208ENST00000476739 CSPG4Q6UVK1 2322 aa8.21□□□□□ -1.09
HDAC3-208ENST00000476739 TANC2Q9HCD6 1990 aa8.21□□□□□ -1.09
HDAC3-208ENST00000476739 IGHV1-69-2A0A0G2JMI3 117 aa8.21□□□□□ -1.1
HDAC3-208ENST00000476739 IGHV3-64DA0A0J9YX35 117 aa8.21□□□□□ -1.1
HDAC3-208ENST00000476739 LOC100130705A0A1B0GUX0 176 aa8.21□□□□□ -1.1
HDAC3-208ENST00000476739 A0A1W2PQL4 384 aaPredicted RBP8.21□□□□□ -1.1
HDAC3-208ENST00000476739 NDUFS8O00217 210 aa8.21□□□□□ -1.1
HDAC3-208ENST00000476739 SLC16A6O15403 523 aa8.21□□□□□ -1.1
HDAC3-208ENST00000476739 CLIC3O95833 236 aa8.21□□□□□ -1.1
HDAC3-208ENST00000476739 PNPP00491 289 aa8.21□□□□□ -1.1
HDAC3-208ENST00000476739 CD55P08174 381 aa8.21□□□□□ -1.1
HDAC3-208ENST00000476739 ACHEP22303 614 aa8.21□□□□□ -1.1
HDAC3-208ENST00000476739 USF1P22415 310 aaPredicted RBP8.21□□□□□ -1.1
HDAC3-208ENST00000476739 CRYBB2P43320 205 aa8.21□□□□□ -1.1
HDAC3-208ENST00000476739 SNRPGP62308 76 aaKnown RBP8.21□□□□□ -1.1
HDAC3-208ENST00000476739 TNFAIP6P98066 277 aaPredicted RBP8.21□□□□□ -1.1
HDAC3-208ENST00000476739 FAM3AP98173 230 aa8.21□□□□□ -1.1
HDAC3-208ENST00000476739 LOXL1Q08397 574 aaPredicted RBP8.21□□□□□ -1.1
HDAC3-208ENST00000476739 MFGE8Q08431 387 aaPredicted RBP8.21□□□□□ -1.1
HDAC3-208ENST00000476739 OCLNQ16625 522 aa8.21□□□□□ -1.1
HDAC3-208ENST00000476739 GFOD2Q3B7J2 385 aa8.21□□□□□ -1.1
HDAC3-208ENST00000476739 FAM209AQ5JX71 171 aa8.21□□□□□ -1.1
HDAC3-208ENST00000476739 THOC7Q6I9Y2 204 aaKnown RBP8.21□□□□□ -1.1
HDAC3-208ENST00000476739 ZNF322Q6U7Q0 402 aaPredicted RBP8.21□□□□□ -1.1
HDAC3-208ENST00000476739 KRT77Q7Z794 578 aa8.21□□□□□ -1.1
HDAC3-208ENST00000476739 OR8B12Q8NGG6 310 aa8.21□□□□□ -1.1
HDAC3-208ENST00000476739 APH1BQ8WW43 257 aa8.21□□□□□ -1.1
HDAC3-208ENST00000476739 ITLN1Q8WWA0 313 aa8.21□□□□□ -1.1
HDAC3-208ENST00000476739 TRUB1Q8WWH5 349 aaKnown RBP8.21□□□□□ -1.1
HDAC3-208ENST00000476739 SPSB4Q96A44 273 aa8.21□□□□□ -1.1
HDAC3-208ENST00000476739 ELMOD3Q96FG2 381 aa8.21□□□□□ -1.1
HDAC3-208ENST00000476739 REEP6Q96HR9 211 aa8.21□□□□□ -1.1
HDAC3-208ENST00000476739 LYZL4Q96KX0 146 aa8.21□□□□□ -1.1
HDAC3-208ENST00000476739 APOL4Q9BPW4 351 aa8.21□□□□□ -1.1
HDAC3-208ENST00000476739 SLC30A2Q9BRI3 323 aa8.21□□□□□ -1.1
HDAC3-208ENST00000476739 PPP1R3EQ9H7J1 279 aa8.21□□□□□ -1.1
HDAC3-208ENST00000476739 CHODLQ9H9P2 273 aa8.21□□□□□ -1.1
HDAC3-208ENST00000476739 CLN6Q9NWW5 311 aa8.21□□□□□ -1.1
HDAC3-208ENST00000476739 FAM206AQ9NX38 181 aa8.21□□□□□ -1.1
HDAC3-208ENST00000476739 IMPAD1Q9NX62 359 aa8.21□□□□□ -1.1
HDAC3-208ENST00000476739 CGGBP1Q9UFW8 167 aaPredicted RBP8.21□□□□□ -1.1
HDAC3-208ENST00000476739 MRM2Q9UI43 246 aaKnown RBP8.21□□□□□ -1.1
HDAC3-208ENST00000476739 DYSFO75923 2080 aa8.21□□□□□ -1.1
HDAC3-208ENST00000476739 ABCA1O95477 2261 aa8.2□□□□□ -1.1
HDAC3-208ENST00000476739 hCG_38984A0A1B0GV85 526 aa8.2□□□□□ -1.1
HDAC3-208ENST00000476739 A0A1B0GWJ7 208 aa8.2□□□□□ -1.1
HDAC3-208ENST00000476739 GGT3PA6NGU5 568 aa8.2□□□□□ -1.1
HDAC3-208ENST00000476739 CD300LBA8K4G0 201 aa8.2□□□□□ -1.1
HDAC3-208ENST00000476739 F5H5P2 479 aa8.2□□□□□ -1.1
HDAC3-208ENST00000476739 CASQ2O14958 399 aaPredicted RBP8.2□□□□□ -1.1
HDAC3-208ENST00000476739 PPIHO43447 177 aaKnown RBP8.2□□□□□ -1.1
HDAC3-208ENST00000476739 XRCC2O43543 280 aa8.2□□□□□ -1.1
HDAC3-208ENST00000476739 SRSF10O75494 262 aaKnown RBP8.2□□□□□ -1.1
HDAC3-208ENST00000476739 HEXAP06865 529 aa8.2□□□□□ -1.1
HDAC3-208ENST00000476739 TACSTD2P09758 323 aa8.2□□□□□ -1.1
HDAC3-208ENST00000476739 CA6P23280 308 aa8.2□□□□□ -1.1
HDAC3-208ENST00000476739 GPR6P46095 362 aaPredicted RBP8.2□□□□□ -1.1
HDAC3-208ENST00000476739 PSMA6P60900 246 aaKnown RBP8.2□□□□□ -1.1
HDAC3-208ENST00000476739 MRPS11P82912 194 aaKnown RBP8.2□□□□□ -1.1
HDAC3-208ENST00000476739 ROM1Q03395 351 aa8.2□□□□□ -1.1
HDAC3-208ENST00000476739 ZNF85Q03923 595 aa8.2□□□□□ -1.1
HDAC3-208ENST00000476739 MAB21L1Q13394 359 aa8.2□□□□□ -1.1
HDAC3-208ENST00000476739 TIGD6Q17RP2 521 aa8.2□□□□□ -1.1
HDAC3-208ENST00000476739 TMEM249Q2WGJ8 235 aa8.2□□□□□ -1.1
HDAC3-208ENST00000476739 ZMAT1Q5H9K5 638 aa8.2□□□□□ -1.1
HDAC3-208ENST00000476739 SLC25A30Q5SVS4 291 aa8.2□□□□□ -1.1
HDAC3-208ENST00000476739 AVPI1Q5T686 147 aa8.2□□□□□ -1.1
HDAC3-208ENST00000476739 OGFRL1Q5TC84 451 aaPredicted RBP8.2□□□□□ -1.1
HDAC3-208ENST00000476739 KCTD18Q6PI47 426 aaPredicted RBP8.2□□□□□ -1.1
HDAC3-208ENST00000476739 IQCF2Q8IXL9 164 aa8.2□□□□□ -1.1
HDAC3-208ENST00000476739 ZNF679Q8IYX0 411 aa8.2□□□□□ -1.1
HDAC3-208ENST00000476739 OR10H4Q8NGA5 316 aa8.2□□□□□ -1.1
HDAC3-208ENST00000476739 OR56B2PQ8NGI1 322 aa8.2□□□□□ -1.1
HDAC3-208ENST00000476739 OR13G1Q8NGZ3 307 aa8.2□□□□□ -1.1
HDAC3-208ENST00000476739 RHOXF1Q8NHV9 184 aa8.2□□□□□ -1.1
HDAC3-208ENST00000476739 ZNF420Q8TAQ5 688 aaPredicted RBP8.2□□□□□ -1.1
HDAC3-208ENST00000476739 ASB17Q8WXJ9 295 aa8.2□□□□□ -1.1
HDAC3-208ENST00000476739 CCL17Q92583 94 aa8.2□□□□□ -1.1
HDAC3-208ENST00000476739 RNFT2Q96EX2 444 aa8.2□□□□□ -1.1
HDAC3-208ENST00000476739 PGAM5Q96HS1 289 aa8.2□□□□□ -1.1
HDAC3-208ENST00000476739 OR2V2Q96R30 315 aa8.2□□□□□ -1.1
HDAC3-208ENST00000476739 MROQ9BYG7 248 aa8.2□□□□□ -1.1
HDAC3-208ENST00000476739 NARFLQ9H6Q4 476 aa8.2□□□□□ -1.1
HDAC3-208ENST00000476739 AMBNQ9NP70 447 aa8.2□□□□□ -1.1
HDAC3-208ENST00000476739 TMEM100Q9NV29 134 aa8.2□□□□□ -1.1
HDAC3-208ENST00000476739 IL19Q9UHD0 177 aa8.2□□□□□ -1.1
HDAC3-208ENST00000476739 TMEM14AQ9Y6G1 99 aa8.2□□□□□ -1.1
HDAC3-208ENST00000476739 A0A1B0GVG6 124 aa8.19□□□□□ -1.1
HDAC3-208ENST00000476739 TMEM269A0A1B0GVZ9 245 aa8.19□□□□□ -1.1
HDAC3-208ENST00000476739 ZNF670-ZNF695F2Z2N8 137 aa8.19□□□□□ -1.1
HDAC3-208ENST00000476739 J3QRE1 110 aa8.19□□□□□ -1.1
HDAC3-208ENST00000476739 WBP4O75554 376 aaKnown RBP8.19□□□□□ -1.1
HDAC3-208ENST00000476739 APOC1P02654 83 aa8.19□□□□□ -1.1
HDAC3-208ENST00000476739 IGHV4-31P0DP07 118 aa8.19□□□□□ -1.1
HDAC3-208ENST00000476739 ACKR3P25106 362 aa8.19□□□□□ -1.1
HDAC3-208ENST00000476739 RPL5P46777 297 aaKnown RBP8.19□□□□□ -1.1
HDAC3-208ENST00000476739 TMEM33P57088 247 aa8.19□□□□□ -1.1
HDAC3-208ENST00000476739 ARPC4P59998 168 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms