RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 LOC105371242A0A075B767 164 aa13.63□□□□□ -0.23
COL1A1-205ENST00000476387 PPIAL4CA0A0B4J2A2 164 aa13.63□□□□□ -0.23
COL1A1-205ENST00000476387 CD300LBA8K4G0 201 aa13.63□□□□□ -0.23
COL1A1-205ENST00000476387 PPIAL4DF5H284 164 aa13.63□□□□□ -0.23
COL1A1-205ENST00000476387 H0YL77 283 aa13.63□□□□□ -0.23
COL1A1-205ENST00000476387 AVPP01185 164 aa13.63□□□□□ -0.23
COL1A1-205ENST00000476387 IGHV2-70P01814 119 aa13.63□□□□□ -0.23
COL1A1-205ENST00000476387 HLA-DPB1P04440 258 aa13.63□□□□□ -0.23
COL1A1-205ENST00000476387 SBK2P0C263 348 aa13.63□□□□□ -0.23
COL1A1-205ENST00000476387 PPIAL4FP0DN26 164 aa13.63□□□□□ -0.23
COL1A1-205ENST00000476387 BTG1P62324 171 aa13.63□□□□□ -0.23
COL1A1-205ENST00000476387 OR8G1Q15617 311 aa13.63□□□□□ -0.23
COL1A1-205ENST00000476387 TIGD6Q17RP2 521 aa13.63□□□□□ -0.23
COL1A1-205ENST00000476387 RHOUQ7L0Q8 258 aa13.63□□□□□ -0.23
COL1A1-205ENST00000476387 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.63□□□□□ -0.23
COL1A1-205ENST00000476387 KLHL36Q8N4N3 616 aa13.63□□□□□ -0.23
COL1A1-205ENST00000476387 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.63□□□□□ -0.23
COL1A1-205ENST00000476387 OTOSQ8NHW6 89 aa13.63□□□□□ -0.23
COL1A1-205ENST00000476387 THEM6Q8WUY1 208 aa13.63□□□□□ -0.23
COL1A1-205ENST00000476387 AMELYQ99218 206 aa13.63□□□□□ -0.23
COL1A1-205ENST00000476387 ADAT1Q9BUB4 502 aaKnown RBP13.63□□□□□ -0.23
COL1A1-205ENST00000476387 DNAJC27Q9NZQ0 273 aa13.63□□□□□ -0.23
COL1A1-205ENST00000476387 DOCK11Q5JSL3 2073 aa13.63□□□□□ -0.23
COL1A1-205ENST00000476387 TENM1Q9UKZ4 2725 aa13.62□□□□□ -0.23
COL1A1-205ENST00000476387 A0A1B0GWJ7 208 aa13.62□□□□□ -0.23
COL1A1-205ENST00000476387 LRRC30A6NM36 301 aa13.62□□□□□ -0.23
COL1A1-205ENST00000476387 MITFO75030 526 aaPredicted RBP13.62□□□□□ -0.23
COL1A1-205ENST00000476387 SLC2A5P22732 501 aa13.62□□□□□ -0.23
COL1A1-205ENST00000476387 OPRL1P41146 370 aa13.62□□□□□ -0.23
COL1A1-205ENST00000476387 HILS1P60008 231 aa13.62□□□□□ -0.23
COL1A1-205ENST00000476387 HNRNPA0Q13151 305 aaKnown RBP13.62□□□□□ -0.23
COL1A1-205ENST00000476387 KDM4DQ6B0I6 523 aa13.62□□□□□ -0.23
COL1A1-205ENST00000476387 MOGAT3Q86VF5 341 aa13.62□□□□□ -0.23
COL1A1-205ENST00000476387 C1orf87Q8N0U7 546 aa13.62□□□□□ -0.23
COL1A1-205ENST00000476387 MUC20Q8N307 709 aaPredicted RBP13.62□□□□□ -0.23
COL1A1-205ENST00000476387 OR52H1Q8NGJ2 320 aa13.62□□□□□ -0.23
COL1A1-205ENST00000476387 ZNF420Q8TAQ5 688 aaPredicted RBP13.62□□□□□ -0.23
COL1A1-205ENST00000476387 NANPQ8TBE9 248 aa13.62□□□□□ -0.23
COL1A1-205ENST00000476387 CENPNQ96H22 339 aaPredicted RBP13.62□□□□□ -0.23
COL1A1-205ENST00000476387 JMJD8Q96S16 334 aa13.62□□□□□ -0.23
COL1A1-205ENST00000476387 SEMA6AQ9H2E6 1030 aa13.62□□□□□ -0.23
COL1A1-205ENST00000476387 LAMP5Q9UJQ1 280 aa13.62□□□□□ -0.23
COL1A1-205ENST00000476387 ARHGAP32A7KAX9 2087 aa13.61□□□□□ -0.23
COL1A1-205ENST00000476387 IGHV3-64DA0A0J9YX35 117 aa13.61□□□□□ -0.23
COL1A1-205ENST00000476387 C5orf63A6NC05 138 aa13.61□□□□□ -0.23
COL1A1-205ENST00000476387 TMEM178BH3BS89 294 aa13.61□□□□□ -0.23
COL1A1-205ENST00000476387 EBAG9O00559 213 aa13.61□□□□□ -0.23
COL1A1-205ENST00000476387 FOXH1O75593 365 aa13.61□□□□□ -0.23
COL1A1-205ENST00000476387 IRF2P14316 349 aa13.61□□□□□ -0.23
COL1A1-205ENST00000476387 CA6P23280 308 aa13.61□□□□□ -0.23
COL1A1-205ENST00000476387 CFL1P23528 166 aaKnown RBP13.61□□□□□ -0.23
COL1A1-205ENST00000476387 MDH2P40926 338 aaKnown RBP13.61□□□□□ -0.23
COL1A1-205ENST00000476387 CD200P41217 278 aa13.61□□□□□ -0.23
COL1A1-205ENST00000476387 ZNF121P58317 390 aaPredicted RBP13.61□□□□□ -0.23
COL1A1-205ENST00000476387 GFOD2Q3B7J2 385 aa13.61□□□□□ -0.23
COL1A1-205ENST00000476387 TMEM155Q4W5P6 130 aa13.61□□□□□ -0.23
COL1A1-205ENST00000476387 SLX4IPQ5VYV7 408 aa13.61□□□□□ -0.23
COL1A1-205ENST00000476387 FAM57BQ71RH2 274 aa13.61□□□□□ -0.23
COL1A1-205ENST00000476387 SLC16A9Q7RTY1 509 aa13.61□□□□□ -0.23
COL1A1-205ENST00000476387 CELF2-AS1Q8N7Q2 184 aa13.61□□□□□ -0.23
COL1A1-205ENST00000476387 OR56B2PQ8NGI1 322 aa13.61□□□□□ -0.23
COL1A1-205ENST00000476387 OR11L1Q8NGX0 322 aa13.61□□□□□ -0.23
COL1A1-205ENST00000476387 PYDC1Q8WXC3 89 aa13.61□□□□□ -0.23
COL1A1-205ENST00000476387 REEP6Q96HR9 211 aa13.61□□□□□ -0.23
COL1A1-205ENST00000476387 PGAM5Q96HS1 289 aa13.61□□□□□ -0.23
COL1A1-205ENST00000476387 SIGLEC11Q96RL6 698 aa13.61□□□□□ -0.23
COL1A1-205ENST00000476387 YIPF3Q9GZM5 350 aa13.61□□□□□ -0.23
COL1A1-205ENST00000476387 OR10A2Q9H208 303 aa13.61□□□□□ -0.23
COL1A1-205ENST00000476387 BRD7Q9NPI1 651 aa13.61□□□□□ -0.23
COL1A1-205ENST00000476387 MRPL15Q9P015 296 aaKnown RBP13.61□□□□□ -0.23
COL1A1-205ENST00000476387 OAZ3Q9UMX2 235 aa13.61□□□□□ -0.23
COL1A1-205ENST00000476387 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.6□□□□□ -0.23
COL1A1-205ENST00000476387 SAC3D1A6NKF1 404 aa13.6□□□□□ -0.23
COL1A1-205ENST00000476387 ZAR1LA6NP61 321 aa13.6□□□□□ -0.23
COL1A1-205ENST00000476387 PRKYO43930 277 aa13.6□□□□□ -0.23
COL1A1-205ENST00000476387 GMDSO60547 372 aa13.6□□□□□ -0.23
COL1A1-205ENST00000476387 MRPL3P09001 348 aaKnown RBP13.6□□□□□ -0.23
COL1A1-205ENST00000476387 ANOS1P23352 680 aa13.6□□□□□ -0.23
COL1A1-205ENST00000476387 DDOSTP39656 456 aa13.6□□□□□ -0.23
COL1A1-205ENST00000476387 GATA4P43694 442 aa13.6□□□□□ -0.23
COL1A1-205ENST00000476387 ACTR3P61158 418 aa13.6□□□□□ -0.23
COL1A1-205ENST00000476387 LCN2P80188 198 aa13.6□□□□□ -0.23
COL1A1-205ENST00000476387 MZT1Q08AG7 82 aa13.6□□□□□ -0.23
COL1A1-205ENST00000476387 ZMYND11Q15326 602 aa13.6□□□□□ -0.23
COL1A1-205ENST00000476387 ZNF181Q2M3W8 571 aa13.6□□□□□ -0.23
COL1A1-205ENST00000476387 KCTD18Q6PI47 426 aaPredicted RBP13.6□□□□□ -0.23
COL1A1-205ENST00000476387 C12orf54Q6X4T0 127 aa13.6□□□□□ -0.23
COL1A1-205ENST00000476387 KRT77Q7Z794 578 aa13.6□□□□□ -0.23
COL1A1-205ENST00000476387 FAM216AQ8WUB2 273 aa13.6□□□□□ -0.23
COL1A1-205ENST00000476387 ERGIC1Q969X5 290 aa13.6□□□□□ -0.23
COL1A1-205ENST00000476387 SPSB4Q96A44 273 aa13.6□□□□□ -0.23
COL1A1-205ENST00000476387 TEAD3Q99594 435 aa13.6□□□□□ -0.23
COL1A1-205ENST00000476387 CIB1Q99828 191 aa13.6□□□□□ -0.23
COL1A1-205ENST00000476387 SUCNR1Q9BXA5 334 aa13.6□□□□□ -0.23
COL1A1-205ENST00000476387 C7orf69Q9H7B7 122 aa13.6□□□□□ -0.23
COL1A1-205ENST00000476387 NIPAL2Q9H841 368 aa13.6□□□□□ -0.23
COL1A1-205ENST00000476387 H2AFY2Q9P0M6 372 aaPredicted RBP13.6□□□□□ -0.23
COL1A1-205ENST00000476387 OPN4Q9UHM6 478 aa13.6□□□□□ -0.23
COL1A1-205ENST00000476387 POLR3KQ9Y2Y1 108 aaPredicted RBP13.6□□□□□ -0.23
COL1A1-205ENST00000476387 CCDC182A6NF36 153 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms