RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 LSM1O15116 133 aaKnown RBP2.81□□□□□ -1.96
PTCD3-211ENST00000476215 NUPL2O15504 423 aaKnown RBP2.81□□□□□ -1.96
PTCD3-211ENST00000476215 ASGR1P07306 291 aa2.81□□□□□ -1.96
PTCD3-211ENST00000476215 ACSM4P0C7M7 580 aa2.81□□□□□ -1.96
PTCD3-211ENST00000476215 WARSP23381 471 aaKnown RBP2.81□□□□□ -1.96
PTCD3-211ENST00000476215 DCKP27707 260 aa2.81□□□□□ -1.96
PTCD3-211ENST00000476215 GDI1P31150 447 aa2.81□□□□□ -1.96
PTCD3-211ENST00000476215 GPX4P36969 197 aaPredicted RBP2.81□□□□□ -1.96
PTCD3-211ENST00000476215 CSNK1EP49674 416 aaKnown RBP2.81□□□□□ -1.96
PTCD3-211ENST00000476215 RND2P52198 227 aa2.81□□□□□ -1.96
PTCD3-211ENST00000476215 XKR4Q5GH76 650 aa2.81□□□□□ -1.96
PTCD3-211ENST00000476215 SOHLH1Q5JUK2 328 aa2.81□□□□□ -1.96
PTCD3-211ENST00000476215 ZNF684Q5T5D7 378 aa2.81□□□□□ -1.96
PTCD3-211ENST00000476215 C9orf135Q5VTT2 229 aa2.81□□□□□ -1.96
PTCD3-211ENST00000476215 FBXW12Q6X9E4 464 aa2.81□□□□□ -1.96
PTCD3-211ENST00000476215 CERS6Q6ZMG9 384 aa2.81□□□□□ -1.96
PTCD3-211ENST00000476215 NTM-AS1Q6ZSK4 140 aa2.81□□□□□ -1.96
PTCD3-211ENST00000476215 WDR86Q86TI4 376 aa2.81□□□□□ -1.96
PTCD3-211ENST00000476215 ZFP41Q8N8Y5 198 aa2.81□□□□□ -1.96
PTCD3-211ENST00000476215 PRELID2Q8N945 189 aa2.81□□□□□ -1.96
PTCD3-211ENST00000476215 ZNF709Q8N972 641 aa2.81□□□□□ -1.96
PTCD3-211ENST00000476215 ACMSDQ8TDX5 336 aa2.81□□□□□ -1.96
PTCD3-211ENST00000476215 ELMO1Q92556 727 aa2.81□□□□□ -1.96
PTCD3-211ENST00000476215 NTAN1Q96AB6 310 aa2.81□□□□□ -1.96
PTCD3-211ENST00000476215 LINC00477Q96M19 166 aa2.81□□□□□ -1.96
PTCD3-211ENST00000476215 GLT1D1Q96MS3 346 aa2.81□□□□□ -1.96
PTCD3-211ENST00000476215 ZNF578Q96N58 590 aaPredicted RBP2.81□□□□□ -1.96
PTCD3-211ENST00000476215 CDX2Q99626 313 aaPredicted RBP2.81□□□□□ -1.96
PTCD3-211ENST00000476215 HRASLS2Q9NWW9 162 aa2.81□□□□□ -1.96
PTCD3-211ENST00000476215 Q9Y3F1 56 aa2.81□□□□□ -1.96
PTCD3-211ENST00000476215 SYNRGQ9UMZ2 1314 aa2.81□□□□□ -1.96
PTCD3-211ENST00000476215 NCOR1O75376 2440 aa2.81□□□□□ -1.96
PTCD3-211ENST00000476215 BAZ2AQ9UIF9 1905 aaKnown RBP2.8□□□□□ -1.96
PTCD3-211ENST00000476215 KIF26AQ9ULI4 1882 aaPredicted RBP2.8□□□□□ -1.96
PTCD3-211ENST00000476215 PLIN4Q96Q06 1357 aa2.8□□□□□ -1.96
PTCD3-211ENST00000476215 TMEM223A0PJW6 202 aa2.8□□□□□ -1.96
PTCD3-211ENST00000476215 SGK1O00141 431 aa2.8□□□□□ -1.96
PTCD3-211ENST00000476215 KLHL41O60662 606 aa2.8□□□□□ -1.96
PTCD3-211ENST00000476215 FOXH1O75593 365 aa2.8□□□□□ -1.96
PTCD3-211ENST00000476215 OR56A5P0C7T3 313 aa2.8□□□□□ -1.96
PTCD3-211ENST00000476215 RRM2P31350 389 aa2.8□□□□□ -1.96
PTCD3-211ENST00000476215 CX3CR1P49238 355 aa2.8□□□□□ -1.96
PTCD3-211ENST00000476215 BEX3Q00994 111 aa2.8□□□□□ -1.96
PTCD3-211ENST00000476215 LOXL1Q08397 574 aaPredicted RBP2.8□□□□□ -1.96
PTCD3-211ENST00000476215 IRF4Q15306 451 aa2.8□□□□□ -1.96
PTCD3-211ENST00000476215 OR7A5Q15622 319 aa2.8□□□□□ -1.96
PTCD3-211ENST00000476215 MRPL23Q16540 153 aaKnown RBP2.8□□□□□ -1.96
PTCD3-211ENST00000476215 LY6EQ16553 131 aa2.8□□□□□ -1.96
PTCD3-211ENST00000476215 SNRNP35Q16560 246 aaKnown RBP2.8□□□□□ -1.96
PTCD3-211ENST00000476215 CCDC183Q5T5S1 534 aa2.8□□□□□ -1.96
PTCD3-211ENST00000476215 ARMC12Q5T9G4 340 aa2.8□□□□□ -1.96
PTCD3-211ENST00000476215 PRAMEF20Q5VT98 475 aa2.8□□□□□ -1.96
PTCD3-211ENST00000476215 RAET1LQ5VY80 246 aa2.8□□□□□ -1.96
PTCD3-211ENST00000476215 ZYG11AQ6WRX3 759 aa2.8□□□□□ -1.96
PTCD3-211ENST00000476215 LGI3Q8N145 548 aa2.8□□□□□ -1.96
PTCD3-211ENST00000476215 ZNF615Q8N8J6 731 aa2.8□□□□□ -1.96
PTCD3-211ENST00000476215 OR2A1Q8NGT9 310 aa2.8□□□□□ -1.96
PTCD3-211ENST00000476215 ZNF461Q8TAF7 563 aa2.8□□□□□ -1.96
PTCD3-211ENST00000476215 RAB3IL1Q8TBN0 382 aa2.8□□□□□ -1.96
PTCD3-211ENST00000476215 ESR2Q92731 530 aa2.8□□□□□ -1.96
PTCD3-211ENST00000476215 N4BP2L2Q92802 583 aaPredicted RBP2.8□□□□□ -1.96
PTCD3-211ENST00000476215 SEH1LQ96EE3 360 aa2.8□□□□□ -1.96
PTCD3-211ENST00000476215 DNAJC1Q96KC8 554 aaKnown RBP2.8□□□□□ -1.96
PTCD3-211ENST00000476215 SPNS1Q9H2V7 528 aa2.8□□□□□ -1.96
PTCD3-211ENST00000476215 LGALS13Q9UHV8 139 aa2.8□□□□□ -1.96
PTCD3-211ENST00000476215 PITPNC1Q9UKF7 332 aa2.8□□□□□ -1.96
PTCD3-211ENST00000476215 KCNE3Q9Y6H6 103 aa2.8□□□□□ -1.96
PTCD3-211ENST00000476215 WDR87Q6ZQQ6 2873 aa2.8□□□□□ -1.96
PTCD3-211ENST00000476215 ALPK3Q96L96 1907 aa2.8□□□□□ -1.96
PTCD3-211ENST00000476215 REV3LO60673 3130 aa2.79□□□□□ -1.96
PTCD3-211ENST00000476215 MAST2Q6P0Q8 1798 aa2.79□□□□□ -1.96
PTCD3-211ENST00000476215 DDX60LQ5H9U9 1706 aaKnown RBP2.79□□□□□ -1.96
PTCD3-211ENST00000476215 MROH7Q68CQ1 1323 aa2.79□□□□□ -1.96
PTCD3-211ENST00000476215 CCDC171Q6TFL3 1326 aa2.79□□□□□ -1.96
PTCD3-211ENST00000476215 MYO9BQ13459 2157 aa2.79□□□□□ -1.96
PTCD3-211ENST00000476215 C7orf66A4D0T2 115 aa2.79□□□□□ -1.96
PTCD3-211ENST00000476215 COLCA2A8K830 154 aa2.79□□□□□ -1.96
PTCD3-211ENST00000476215 C9JVG2 144 aa2.79□□□□□ -1.96
PTCD3-211ENST00000476215 GOLGA8HP0CJ92 632 aa2.79□□□□□ -1.96
PTCD3-211ENST00000476215 DTYMKP23919 212 aa2.79□□□□□ -1.96
PTCD3-211ENST00000476215 SLC1A1P43005 524 aa2.79□□□□□ -1.96
PTCD3-211ENST00000476215 VSX2P58304 361 aaPredicted RBP2.79□□□□□ -1.96
PTCD3-211ENST00000476215 UBE2NP61088 152 aaKnown RBP2.79□□□□□ -1.96
PTCD3-211ENST00000476215 STXBP1P61764 594 aaKnown RBP2.79□□□□□ -1.96
PTCD3-211ENST00000476215 CDH17Q12864 832 aa2.79□□□□□ -1.96
PTCD3-211ENST00000476215 ORMDL2Q53FV1 153 aa2.79□□□□□ -1.96
PTCD3-211ENST00000476215 SMUG1Q53HV7 270 aa2.79□□□□□ -1.96
PTCD3-211ENST00000476215 REEP3Q6NUK4 255 aa2.79□□□□□ -1.96
PTCD3-211ENST00000476215 ZNF880Q6PDB4 577 aa2.79□□□□□ -1.96
PTCD3-211ENST00000476215 SHISA6Q6ZSJ9 500 aa2.79□□□□□ -1.96
PTCD3-211ENST00000476215 SLC16A14Q7RTX9 510 aa2.79□□□□□ -1.96
PTCD3-211ENST00000476215 TMEM150AQ86TG1 271 aa2.79□□□□□ -1.96
PTCD3-211ENST00000476215 CALHM1Q8IU99 346 aa2.79□□□□□ -1.96
PTCD3-211ENST00000476215 IQCKQ8N0W5 287 aa2.79□□□□□ -1.96
PTCD3-211ENST00000476215 RNF182Q8N6D2 247 aa2.79□□□□□ -1.96
PTCD3-211ENST00000476215 METTL13Q8N6R0 699 aa2.79□□□□□ -1.96
PTCD3-211ENST00000476215 COQ8AQ8NI60 647 aa2.79□□□□□ -1.96
PTCD3-211ENST00000476215 C15orf40Q8WUR7 153 aa2.79□□□□□ -1.96
PTCD3-211ENST00000476215 OR10C1Q96KK4 312 aa2.79□□□□□ -1.96
PTCD3-211ENST00000476215 MICU1Q9BPX6 476 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms