RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 FGFRL1Q8N441 504 aa16.82■□□□□ 0.28
VPS36-203ENST00000475375 GCSAMQ8N6F7 178 aa16.82■□□□□ 0.28
VPS36-203ENST00000475375 C11orf44Q8N8P7 122 aa16.82■□□□□ 0.28
VPS36-203ENST00000475375 OR2AE1Q8NHA4 323 aa16.82■□□□□ 0.28
VPS36-203ENST00000475375 NPRL2Q8WTW4 380 aa16.82■□□□□ 0.28
VPS36-203ENST00000475375 SPTSSAQ969W0 71 aa16.82■□□□□ 0.28
VPS36-203ENST00000475375 ZNF799Q96GE5 643 aa16.82■□□□□ 0.28
VPS36-203ENST00000475375 NMNAT3Q96T66 252 aa16.82■□□□□ 0.28
VPS36-203ENST00000475375 NSRP1Q9H0G5 558 aaKnown RBP16.82■□□□□ 0.28
VPS36-203ENST00000475375 GMPR2Q9P2T1 348 aaKnown RBP16.82■□□□□ 0.28
VPS36-203ENST00000475375 UNC119BA6NIH7 251 aa16.81■□□□□ 0.28
VPS36-203ENST00000475375 NPFFO15130 113 aa16.81■□□□□ 0.28
VPS36-203ENST00000475375 EDF1O60869 148 aaKnown RBP16.81■□□□□ 0.28
VPS36-203ENST00000475375 PTBP3O95758 552 aaKnown RBP16.81■□□□□ 0.28
VPS36-203ENST00000475375 TXNDC12O95881 172 aa16.81■□□□□ 0.28
VPS36-203ENST00000475375 H1F0P07305 194 aaKnown RBP16.81■□□□□ 0.28
VPS36-203ENST00000475375 TROVE2P10155 538 aaKnown RBP eCLIP16.81■□□□□ 0.28
VPS36-203ENST00000475375 ZNF92Q03936 586 aa16.81■□□□□ 0.28
VPS36-203ENST00000475375 MZT1Q08AG7 82 aa16.81■□□□□ 0.28
VPS36-203ENST00000475375 KLF10Q13118 480 aa16.81■□□□□ 0.28
VPS36-203ENST00000475375 MICBQ29980 383 aa16.81■□□□□ 0.28
VPS36-203ENST00000475375 SNAI3Q3KNW1 292 aa16.81■□□□□ 0.28
VPS36-203ENST00000475375 SAMD5Q5TGI4 173 aa16.81■□□□□ 0.28
VPS36-203ENST00000475375 TSEN54Q7Z6J9 526 aaKnown RBP16.81■□□□□ 0.28
VPS36-203ENST00000475375 SPERTQ8NA61 448 aa16.81■□□□□ 0.28
VPS36-203ENST00000475375 CCL13Q99616 98 aa16.81■□□□□ 0.28
VPS36-203ENST00000475375 KRCC1Q9NPI7 259 aaPredicted RBP16.81■□□□□ 0.28
VPS36-203ENST00000475375 RPRD1BQ9NQG5 326 aaKnown RBP16.81■□□□□ 0.28
VPS36-203ENST00000475375 C14orf119Q9NWQ9 140 aa16.81■□□□□ 0.28
VPS36-203ENST00000475375 A0A1B0GW55 424 aa16.8■□□□□ 0.28
VPS36-203ENST00000475375 CXCR6O00574 342 aa16.8■□□□□ 0.28
VPS36-203ENST00000475375 DUX4L2P0CJ85 424 aa16.8■□□□□ 0.28
VPS36-203ENST00000475375 DUX4L3P0CJ86 424 aa16.8■□□□□ 0.28
VPS36-203ENST00000475375 DUX4L4P0CJ87 422 aa16.8■□□□□ 0.28
VPS36-203ENST00000475375 DUX4L5P0CJ88 424 aa16.8■□□□□ 0.28
VPS36-203ENST00000475375 DUX4L6P0CJ89 424 aa16.8■□□□□ 0.28
VPS36-203ENST00000475375 DUX4L7P0CJ90 424 aa16.8■□□□□ 0.28
VPS36-203ENST00000475375 FXYD6P3P58550 94 aa16.8■□□□□ 0.28
VPS36-203ENST00000475375 RFX4Q33E94 735 aa16.8■□□□□ 0.28
VPS36-203ENST00000475375 KPRPQ5T749 579 aaPredicted RBP16.8■□□□□ 0.28
VPS36-203ENST00000475375 DUX4L9Q6RFH8 374 aaPredicted RBP16.8■□□□□ 0.28
VPS36-203ENST00000475375 SMARCD3Q6STE5 483 aa16.8■□□□□ 0.28
VPS36-203ENST00000475375 OR5R1Q8NH85 324 aa16.8■□□□□ 0.28
VPS36-203ENST00000475375 MRAPQ8TCY5 172 aa16.8■□□□□ 0.28
VPS36-203ENST00000475375 PNRC2Q9NPJ4 139 aaKnown RBP16.8■□□□□ 0.28
VPS36-203ENST00000475375 MRGBPQ9NV56 204 aa16.8■□□□□ 0.28
VPS36-203ENST00000475375 MRPL15Q9P015 296 aaKnown RBP16.8■□□□□ 0.28
VPS36-203ENST00000475375 KAAG1Q9UBP8 84 aa16.8■□□□□ 0.28
VPS36-203ENST00000475375 DUX4Q9UBX2 424 aa16.8■□□□□ 0.28
VPS36-203ENST00000475375 CYB5R1Q9UHQ9 305 aa16.8■□□□□ 0.28
VPS36-203ENST00000475375 SIGLEC9Q9Y336 463 aa16.8■□□□□ 0.28
VPS36-203ENST00000475375 FAM32AQ9Y421 112 aaKnown RBP16.8■□□□□ 0.28
VPS36-203ENST00000475375 ENPP4Q9Y6X5 453 aa16.8■□□□□ 0.28
VPS36-203ENST00000475375 BHLHE40O14503 412 aa16.79■□□□□ 0.28
VPS36-203ENST00000475375 SERPINA1P01009 418 aa16.79■□□□□ 0.28
VPS36-203ENST00000475375 OMPP47874 163 aa16.79■□□□□ 0.28
VPS36-203ENST00000475375 DLX1P56177 255 aa16.79■□□□□ 0.28
VPS36-203ENST00000475375 KLRD1Q13241 179 aa16.79■□□□□ 0.28
VPS36-203ENST00000475375 PCK2Q16822 640 aa16.79■□□□□ 0.28
VPS36-203ENST00000475375 GLYATL3Q5SZD4 288 aa16.79■□□□□ 0.28
VPS36-203ENST00000475375 TEX36Q5VZQ5 186 aa16.79■□□□□ 0.28
VPS36-203ENST00000475375 METAP1DQ6UB28 335 aaPredicted RBP16.79■□□□□ 0.28
VPS36-203ENST00000475375 CBLL1Q75N03 491 aa16.79■□□□□ 0.28
VPS36-203ENST00000475375 OR8S1Q8NH09 359 aa16.79■□□□□ 0.28
VPS36-203ENST00000475375 OR4K13Q8NH42 304 aa16.79■□□□□ 0.28
VPS36-203ENST00000475375 FANK1Q8TC84 345 aa16.79■□□□□ 0.28
VPS36-203ENST00000475375 FN3KQ9H479 309 aa16.79■□□□□ 0.28
VPS36-203ENST00000475375 CMTM6Q9NX76 183 aa16.79■□□□□ 0.28
VPS36-203ENST00000475375 FBLN5Q9UBX5 448 aa16.79■□□□□ 0.28
VPS36-203ENST00000475375 N6AMT1Q9Y5N5 214 aa16.79■□□□□ 0.28
VPS36-203ENST00000475375 A0A1W2PRQ8 180 aa16.78■□□□□ 0.28
VPS36-203ENST00000475375 MEIOCA2RUB1 952 aa16.78■□□□□ 0.28
VPS36-203ENST00000475375 RNASEK-C17orf49H0YIS7 233 aa16.78■□□□□ 0.28
VPS36-203ENST00000475375 GPR37O15354 613 aa16.78■□□□□ 0.28
VPS36-203ENST00000475375 NOS3P29474 1203 aa16.78■□□□□ 0.28
VPS36-203ENST00000475375 ELF3P78545 371 aaPredicted RBP16.78■□□□□ 0.28
VPS36-203ENST00000475375 LIPEQ05469 1076 aa16.78■□□□□ 0.28
VPS36-203ENST00000475375 SF3A3Q12874 501 aaKnown RBP eCLIP16.78■□□□□ 0.28
VPS36-203ENST00000475375 IKZF1Q13422 519 aa16.78■□□□□ 0.28
VPS36-203ENST00000475375 DGCR6Q14129 220 aa16.78■□□□□ 0.28
VPS36-203ENST00000475375 WDR38Q5JTN6 314 aa16.78■□□□□ 0.28
VPS36-203ENST00000475375 C1orf122Q6ZSJ8 110 aa16.78■□□□□ 0.28
VPS36-203ENST00000475375 SLC36A1Q7Z2H8 476 aa16.78■□□□□ 0.28
VPS36-203ENST00000475375 PNKDQ8N490 385 aa16.78■□□□□ 0.28
VPS36-203ENST00000475375 FAM216BQ8N7L0 139 aa16.78■□□□□ 0.28
VPS36-203ENST00000475375 LY6G5BQ8NDX9 201 aa16.78■□□□□ 0.28
VPS36-203ENST00000475375 OR56B2PQ8NGI1 322 aa16.78■□□□□ 0.28
VPS36-203ENST00000475375 LRRC29Q8WV35 223 aa16.78■□□□□ 0.28
VPS36-203ENST00000475375 H1FXQ92522 213 aaKnown RBP16.78■□□□□ 0.28
VPS36-203ENST00000475375 MAP6Q96JE9 813 aa16.78■□□□□ 0.28
VPS36-203ENST00000475375 FOXJ3Q9UPW0 622 aa16.78■□□□□ 0.28
VPS36-203ENST00000475375 AP3M1Q9Y2T2 418 aa16.78■□□□□ 0.28
VPS36-203ENST00000475375 NDUFB3O43676 98 aa16.77■□□□□ 0.28
VPS36-203ENST00000475375 LHBP01229 141 aa16.77■□□□□ 0.28
VPS36-203ENST00000475375 MUC1P15941 1255 aaPredicted RBP16.77■□□□□ 0.28
VPS36-203ENST00000475375 HIST1H1CP16403 213 aaKnown RBP16.77■□□□□ 0.28
VPS36-203ENST00000475375 ZNF823P16415 610 aa16.77■□□□□ 0.28
VPS36-203ENST00000475375 SLC6A6P31641 620 aa16.77■□□□□ 0.28
VPS36-203ENST00000475375 GRK5P34947 590 aa16.77■□□□□ 0.28
VPS36-203ENST00000475375 SAA4P35542 130 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms