RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 SPICQ8N5J4 248 aa20.24■□□□□ 0.83
CPNE1-223ENST00000475146 PGAM5Q96HS1 289 aa20.24■□□□□ 0.83
CPNE1-223ENST00000475146 PLPP2O43688 288 aa20.23■□□□□ 0.83
CPNE1-223ENST00000475146 CYB5R3P00387 301 aaPredicted RBP20.23■□□□□ 0.83
CPNE1-223ENST00000475146 ZMYND11Q15326 602 aa20.23■□□□□ 0.83
CPNE1-223ENST00000475146 C12orf73Q69YU5 71 aa20.23■□□□□ 0.83
CPNE1-223ENST00000475146 LRRN1Q6UXK5 716 aa20.23■□□□□ 0.83
CPNE1-223ENST00000475146 KLHL36Q8N4N3 616 aa20.23■□□□□ 0.83
CPNE1-223ENST00000475146 TCEANCQ8N8B7 351 aa20.23■□□□□ 0.83
CPNE1-223ENST00000475146 OR52H1Q8NGJ2 320 aa20.23■□□□□ 0.83
CPNE1-223ENST00000475146 SPSB4Q96A44 273 aa20.23■□□□□ 0.83
CPNE1-223ENST00000475146 REEP6Q96HR9 211 aa20.23■□□□□ 0.83
CPNE1-223ENST00000475146 TEAD3Q99594 435 aa20.23■□□□□ 0.83
CPNE1-223ENST00000475146 YIPF3Q9GZM5 350 aa20.23■□□□□ 0.83
CPNE1-223ENST00000475146 OR10A2Q9H208 303 aa20.23■□□□□ 0.83
CPNE1-223ENST00000475146 LRRC30A6NM36 301 aa20.22■□□□□ 0.83
CPNE1-223ENST00000475146 CD200P41217 278 aa20.22■□□□□ 0.83
CPNE1-223ENST00000475146 HCCSP53701 268 aa20.22■□□□□ 0.83
CPNE1-223ENST00000475146 MAB21L1Q13394 359 aa20.22■□□□□ 0.83
CPNE1-223ENST00000475146 TMEM155Q4W5P6 130 aa20.22■□□□□ 0.83
CPNE1-223ENST00000475146 PRAMEF6Q5VXH4 476 aa20.22■□□□□ 0.83
CPNE1-223ENST00000475146 PRSS45Q7RTY3 260 aa20.22■□□□□ 0.83
CPNE1-223ENST00000475146 BCDIN3DQ7Z5W3 292 aaKnown RBP20.22■□□□□ 0.83
CPNE1-223ENST00000475146 DVL3Q92997 716 aaPredicted RBP20.22■□□□□ 0.83
CPNE1-223ENST00000475146 IL4I1Q96RQ9 567 aa20.22■□□□□ 0.83
CPNE1-223ENST00000475146 RIBC2Q9H4K1 309 aa20.22■□□□□ 0.83
CPNE1-223ENST00000475146 MRPL15Q9P015 296 aaKnown RBP20.22■□□□□ 0.83
CPNE1-223ENST00000475146 H2AFY2Q9P0M6 372 aaPredicted RBP20.22■□□□□ 0.83
CPNE1-223ENST00000475146 ZNF205O95201 554 aa20.21■□□□□ 0.83
CPNE1-223ENST00000475146 IRF2P14316 349 aa20.21■□□□□ 0.83
CPNE1-223ENST00000475146 ALOX5APP20292 161 aa20.21■□□□□ 0.83
CPNE1-223ENST00000475146 MDH2P40926 338 aaKnown RBP20.21■□□□□ 0.83
CPNE1-223ENST00000475146 GATA4P43694 442 aa20.21■□□□□ 0.83
CPNE1-223ENST00000475146 ZFP1Q6P2D0 407 aa20.21■□□□□ 0.83
CPNE1-223ENST00000475146 FAHD2BQ6P2I3 314 aaPredicted RBP20.21■□□□□ 0.83
CPNE1-223ENST00000475146 KRT77Q7Z794 578 aa20.21■□□□□ 0.83
CPNE1-223ENST00000475146 LRRC28Q86X40 367 aaPredicted RBP20.21■□□□□ 0.83
CPNE1-223ENST00000475146 C1orf87Q8N0U7 546 aa20.21■□□□□ 0.83
CPNE1-223ENST00000475146 CELF2-AS1Q8N7Q2 184 aa20.21■□□□□ 0.83
CPNE1-223ENST00000475146 OR11L1Q8NGX0 322 aa20.21■□□□□ 0.83
CPNE1-223ENST00000475146 TMEM163Q8TC26 289 aa20.21■□□□□ 0.83
CPNE1-223ENST00000475146 SGK3Q96BR1 496 aa20.21■□□□□ 0.83
CPNE1-223ENST00000475146 FAHD2AQ96GK7 314 aa20.21■□□□□ 0.83
CPNE1-223ENST00000475146 CNN2Q99439 309 aaKnown RBP20.21■□□□□ 0.83
CPNE1-223ENST00000475146 PKP2Q99959 881 aa20.21■□□□□ 0.83
CPNE1-223ENST00000475146 UFSP2Q9NUQ7 469 aa20.21■□□□□ 0.83
CPNE1-223ENST00000475146 ANKRD30BLA7E2S9 258 aa20.2■□□□□ 0.82
CPNE1-223ENST00000475146 GMDSO60547 372 aa20.2■□□□□ 0.82
CPNE1-223ENST00000475146 CFL1P23528 166 aaKnown RBP20.2■□□□□ 0.82
CPNE1-223ENST00000475146 DDOSTP39656 456 aa20.2■□□□□ 0.82
CPNE1-223ENST00000475146 PSMA6P60900 246 aaKnown RBP20.2■□□□□ 0.82
CPNE1-223ENST00000475146 LCN2P80188 198 aa20.2■□□□□ 0.82
CPNE1-223ENST00000475146 FAM3AP98173 230 aa20.2■□□□□ 0.82
CPNE1-223ENST00000475146 ZNF181Q2M3W8 571 aa20.2■□□□□ 0.82
CPNE1-223ENST00000475146 MEPCEQ7L2J0 689 aaKnown RBP20.2■□□□□ 0.82
CPNE1-223ENST00000475146 MUC20Q8N307 709 aaPredicted RBP20.2■□□□□ 0.82
CPNE1-223ENST00000475146 RBM4BQ9BQ04 359 aaKnown RBP20.2■□□□□ 0.82
CPNE1-223ENST00000475146 OSBPL10Q9BXB5 764 aa20.2■□□□□ 0.82
CPNE1-223ENST00000475146 NIPAL2Q9H841 368 aa20.2■□□□□ 0.82
CPNE1-223ENST00000475146 LRP12Q9Y561 859 aa20.2■□□□□ 0.82
CPNE1-223ENST00000475146 A0A0G2JMP0 313 aa20.19■□□□□ 0.82
CPNE1-223ENST00000475146 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP20.19■□□□□ 0.82
CPNE1-223ENST00000475146 A0A0X1KG70 313 aa20.19■□□□□ 0.82
CPNE1-223ENST00000475146 hCG_38984A0A1B0GV85 526 aa20.19■□□□□ 0.82
CPNE1-223ENST00000475146 SLC22A31A6NKX4 558 aa20.19■□□□□ 0.82
CPNE1-223ENST00000475146 H3BNX3 289 aa20.19■□□□□ 0.82
CPNE1-223ENST00000475146 PSMD9O00233 223 aa20.19■□□□□ 0.82
CPNE1-223ENST00000475146 PNPP00491 289 aa20.19■□□□□ 0.82
CPNE1-223ENST00000475146 POLR2IP36954 125 aaKnown RBP20.19■□□□□ 0.82
CPNE1-223ENST00000475146 PMELP40967 661 aa20.19■□□□□ 0.82
CPNE1-223ENST00000475146 NXNL2Q5VZ03 156 aa20.19■□□□□ 0.82
CPNE1-223ENST00000475146 KCTD18Q6PI47 426 aaPredicted RBP20.19■□□□□ 0.82
CPNE1-223ENST00000475146 OR4M2Q8NGB6 313 aa20.19■□□□□ 0.82
CPNE1-223ENST00000475146 ERGIC1Q969X5 290 aa20.19■□□□□ 0.82
CPNE1-223ENST00000475146 GABARAPL3Q9BY60 117 aa20.19■□□□□ 0.82
CPNE1-223ENST00000475146 TTTY10Q9BZA0 68 aa20.19■□□□□ 0.82
CPNE1-223ENST00000475146 FN3KRPQ9HA64 309 aa20.19■□□□□ 0.82
CPNE1-223ENST00000475146 PATZ1Q9HBE1 687 aaKnown RBP20.19■□□□□ 0.82
CPNE1-223ENST00000475146 ZNF319Q9P2F9 582 aa20.19■□□□□ 0.82
CPNE1-223ENST00000475146 TMEM14AQ9Y6G1 99 aa20.19■□□□□ 0.82
CPNE1-223ENST00000475146 FAM20BO75063 409 aa20.18■□□□□ 0.82
CPNE1-223ENST00000475146 FOXH1O75593 365 aa20.18■□□□□ 0.82
CPNE1-223ENST00000475146 MPPED2Q15777 294 aa20.18■□□□□ 0.82
CPNE1-223ENST00000475146 AADACL4Q5VUY2 407 aa20.18■□□□□ 0.82
CPNE1-223ENST00000475146 GID4Q8IVV7 300 aa20.18■□□□□ 0.82
CPNE1-223ENST00000475146 SPERTQ8NA61 448 aa20.18■□□□□ 0.82
CPNE1-223ENST00000475146 RGCCQ9H4X1 137 aa20.18■□□□□ 0.82
CPNE1-223ENST00000475146 G6PC2Q9NQR9 355 aa20.18■□□□□ 0.82
CPNE1-223ENST00000475146 CEACAM18A8MTB9 384 aa20.17■□□□□ 0.82
CPNE1-223ENST00000475146 GSK3AP49840 483 aa20.17■□□□□ 0.82
CPNE1-223ENST00000475146 EFNB1P98172 346 aa20.17■□□□□ 0.82
CPNE1-223ENST00000475146 MZT1Q08AG7 82 aa20.17■□□□□ 0.82
CPNE1-223ENST00000475146 FAM201AQ5SY85 155 aa20.17■□□□□ 0.82
CPNE1-223ENST00000475146 DCAF12L2Q5VW00 463 aa20.17■□□□□ 0.82
CPNE1-223ENST00000475146 KLBQ86Z14 1044 aa20.17■□□□□ 0.82
CPNE1-223ENST00000475146 C10orf67Q8IYJ2 551 aa20.17■□□□□ 0.82
CPNE1-223ENST00000475146 OR8S1Q8NH09 359 aa20.17■□□□□ 0.82
CPNE1-223ENST00000475146 Q8TCH9 128 aa20.17■□□□□ 0.82
CPNE1-223ENST00000475146 ASB17Q8WXJ9 295 aa20.17■□□□□ 0.82
CPNE1-223ENST00000475146 MDFIQ99750 246 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms