RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 ZNF101Q8IZC7 436 aa1.6□□□□□ -2.15
ECHDC1-213ENST00000474240 GABRG1Q8N1C3 465 aa1.6□□□□□ -2.15
ECHDC1-213ENST00000474240 OR1P1Q8NH06 330 aa1.6□□□□□ -2.15
ECHDC1-213ENST00000474240 OR1L1Q8NH94 360 aa1.6□□□□□ -2.15
ECHDC1-213ENST00000474240 EMC6Q9BV81 110 aa1.6□□□□□ -2.15
ECHDC1-213ENST00000474240 SLIRPQ9GZT3 109 aaKnown RBP1.6□□□□□ -2.15
ECHDC1-213ENST00000474240 RETNQ9HD89 108 aa1.6□□□□□ -2.15
ECHDC1-213ENST00000474240 CCNB1IP1Q9NPC3 277 aa1.6□□□□□ -2.15
ECHDC1-213ENST00000474240 C20orf96Q9NUD7 363 aaPredicted RBP1.6□□□□□ -2.15
ECHDC1-213ENST00000474240 IL37Q9NZH6 218 aa1.6□□□□□ -2.15
ECHDC1-213ENST00000474240 SLC17A7Q9P2U7 560 aa1.6□□□□□ -2.15
ECHDC1-213ENST00000474240 DUX4Q9UBX2 424 aa1.6□□□□□ -2.15
ECHDC1-213ENST00000474240 SMIM26A0A096LP01 95 aa1.59□□□□□ -2.15
ECHDC1-213ENST00000474240 TSPAN11A1L157 253 aa1.59□□□□□ -2.15
ECHDC1-213ENST00000474240 ISPDA4D126 451 aa1.59□□□□□ -2.15
ECHDC1-213ENST00000474240 CTAGE15A4D2H0 777 aa1.59□□□□□ -2.15
ECHDC1-213ENST00000474240 PRAMEF26H0Y7S4 382 aa1.59□□□□□ -2.15
ECHDC1-213ENST00000474240 CACNG3O60359 315 aa1.59□□□□□ -2.15
ECHDC1-213ENST00000474240 CDH16O75309 829 aa1.59□□□□□ -2.15
ECHDC1-213ENST00000474240 PTHP01270 115 aa1.59□□□□□ -2.15
ECHDC1-213ENST00000474240 RAB5AP20339 215 aa1.59□□□□□ -2.15
ECHDC1-213ENST00000474240 LOXP28300 417 aaPredicted RBP1.59□□□□□ -2.15
ECHDC1-213ENST00000474240 APLNRP35414 380 aa1.59□□□□□ -2.15
ECHDC1-213ENST00000474240 KIR3DL2P43630 455 aa1.59□□□□□ -2.15
ECHDC1-213ENST00000474240 GDI2P50395 445 aaKnown RBP1.59□□□□□ -2.15
ECHDC1-213ENST00000474240 RAB9AP51151 201 aa1.59□□□□□ -2.15
ECHDC1-213ENST00000474240 MEF2BQ02080 365 aaPredicted RBP1.59□□□□□ -2.15
ECHDC1-213ENST00000474240 IL15RAQ13261 267 aa1.59□□□□□ -2.15
ECHDC1-213ENST00000474240 ZNF829Q3KNS6 432 aaPredicted RBP1.59□□□□□ -2.15
ECHDC1-213ENST00000474240 SP6Q3SY56 376 aa1.59□□□□□ -2.15
ECHDC1-213ENST00000474240 PRAMEF20Q5VT98 475 aa1.59□□□□□ -2.15
ECHDC1-213ENST00000474240 STUMQ69YW2 141 aa1.59□□□□□ -2.15
ECHDC1-213ENST00000474240 THOC7Q6I9Y2 204 aaKnown RBP1.59□□□□□ -2.15
ECHDC1-213ENST00000474240 Q6ZSR6 202 aa1.59□□□□□ -2.15
ECHDC1-213ENST00000474240 USP50Q70EL3 339 aaPredicted RBP1.59□□□□□ -2.15
ECHDC1-213ENST00000474240 BZW1Q7L1Q6 419 aaKnown RBP1.59□□□□□ -2.15
ECHDC1-213ENST00000474240 CTAGE6Q86UF2 777 aa1.59□□□□□ -2.15
ECHDC1-213ENST00000474240 BBS5Q8N3I7 341 aa1.59□□□□□ -2.15
ECHDC1-213ENST00000474240 OR5M1Q8NGP8 315 aa1.59□□□□□ -2.15
ECHDC1-213ENST00000474240 TVP23CQ96ET8 276 aa1.59□□□□□ -2.15
ECHDC1-213ENST00000474240 JSRP1Q96MG2 331 aaPredicted RBP1.59□□□□□ -2.15
ECHDC1-213ENST00000474240 RNF145Q96MT1 663 aa1.59□□□□□ -2.15
ECHDC1-213ENST00000474240 GPR82Q96P67 336 aa1.59□□□□□ -2.15
ECHDC1-213ENST00000474240 KCNS3Q9BQ31 491 aa1.59□□□□□ -2.15
ECHDC1-213ENST00000474240 RHOXF2Q9BQY4 288 aa1.59□□□□□ -2.15
ECHDC1-213ENST00000474240 TMEM243Q9BU79 118 aa1.59□□□□□ -2.15
ECHDC1-213ENST00000474240 NEUROG2Q9H2A3 272 aa1.59□□□□□ -2.15
ECHDC1-213ENST00000474240 RRAGDQ9NQL2 400 aaPredicted RBP1.59□□□□□ -2.15
ECHDC1-213ENST00000474240 RGS18Q9NS28 235 aa1.59□□□□□ -2.15
ECHDC1-213ENST00000474240 RAB20Q9NX57 234 aa1.59□□□□□ -2.15
ECHDC1-213ENST00000474240 COL27A1Q8IZC6 1860 aaPredicted RBP1.58□□□□□ -2.16
ECHDC1-213ENST00000474240 KCNE1BA0A087WTH5 132 aa1.58□□□□□ -2.16
ECHDC1-213ENST00000474240 CEACAM18A8MTB9 384 aa1.58□□□□□ -2.16
ECHDC1-213ENST00000474240 A8MWL6 223 aa1.58□□□□□ -2.16
ECHDC1-213ENST00000474240 MFNGO00587 321 aa1.58□□□□□ -2.16
ECHDC1-213ENST00000474240 MYL12BO14950 172 aa1.58□□□□□ -2.16
ECHDC1-213ENST00000474240 OR7C2O60412 319 aa1.58□□□□□ -2.16
ECHDC1-213ENST00000474240 HLA-HP01893 362 aa1.58□□□□□ -2.16
ECHDC1-213ENST00000474240 GFAPP14136 432 aa1.58□□□□□ -2.16
ECHDC1-213ENST00000474240 CSNK2A2P19784 350 aaPredicted RBP1.58□□□□□ -2.16
ECHDC1-213ENST00000474240 USF1P22415 310 aaPredicted RBP1.58□□□□□ -2.16
ECHDC1-213ENST00000474240 HLA-DMAP28067 261 aa1.58□□□□□ -2.16
ECHDC1-213ENST00000474240 PPICP45877 212 aa1.58□□□□□ -2.16
ECHDC1-213ENST00000474240 FABP6P51161 128 aa1.58□□□□□ -2.16
ECHDC1-213ENST00000474240 CRISP1P54107 249 aa1.58□□□□□ -2.16
ECHDC1-213ENST00000474240 TRDNQ13061 729 aa1.58□□□□□ -2.16
ECHDC1-213ENST00000474240 SLC25A35Q3KQZ1 300 aa1.58□□□□□ -2.16
ECHDC1-213ENST00000474240 KLHL12Q53G59 568 aa1.58□□□□□ -2.16
ECHDC1-213ENST00000474240 MFSD14CQ5VZR4 134 aa1.58□□□□□ -2.16
ECHDC1-213ENST00000474240 MED27Q6P2C8 311 aa1.58□□□□□ -2.16
ECHDC1-213ENST00000474240 DEGS2Q6QHC5 323 aa1.58□□□□□ -2.16
ECHDC1-213ENST00000474240 OPN5Q6U736 354 aa1.58□□□□□ -2.16
ECHDC1-213ENST00000474240 APRG1Q8IVJ8 170 aa1.58□□□□□ -2.16
ECHDC1-213ENST00000474240 SGPP2Q8IWX5 399 aa1.58□□□□□ -2.16
ECHDC1-213ENST00000474240 SLC26A10Q8NG04 563 aa1.58□□□□□ -2.16
ECHDC1-213ENST00000474240 OR2Z1Q8NG97 314 aa1.58□□□□□ -2.16
ECHDC1-213ENST00000474240 OR1S1Q8NH92 325 aa1.58□□□□□ -2.16
ECHDC1-213ENST00000474240 RXFP4Q8TDU9 374 aa1.58□□□□□ -2.16
ECHDC1-213ENST00000474240 DCAKDQ8WVC6 231 aa1.58□□□□□ -2.16
ECHDC1-213ENST00000474240 RCN3Q96D15 328 aa1.58□□□□□ -2.16
ECHDC1-213ENST00000474240 TM2D3Q9BRN9 247 aa1.58□□□□□ -2.16
ECHDC1-213ENST00000474240 UCK2Q9BZX2 261 aa1.58□□□□□ -2.16
ECHDC1-213ENST00000474240 LHX5Q9H2C1 402 aa1.58□□□□□ -2.16
ECHDC1-213ENST00000474240 ZC4H2Q9NQZ6 224 aa1.58□□□□□ -2.16
ECHDC1-213ENST00000474240 AGPAT4Q9NRZ5 378 aa1.58□□□□□ -2.16
ECHDC1-213ENST00000474240 MCUBQ9NWR8 336 aa1.58□□□□□ -2.16
ECHDC1-213ENST00000474240 GCNT4Q9P109 453 aa1.58□□□□□ -2.16
ECHDC1-213ENST00000474240 DHX57Q6P158 1386 aaKnown RBP1.58□□□□□ -2.16
ECHDC1-213ENST00000474240 VGLL3A8MV65 326 aa1.57□□□□□ -2.16
ECHDC1-213ENST00000474240 H7C1H1 209 aa1.57□□□□□ -2.16
ECHDC1-213ENST00000474240 ERLIN1O75477 346 aa1.57□□□□□ -2.16
ECHDC1-213ENST00000474240 IGLV6-57P01721 117 aa1.57□□□□□ -2.16
ECHDC1-213ENST00000474240 MAS1P04201 325 aa1.57□□□□□ -2.16
ECHDC1-213ENST00000474240 IGLV7-43P04211 117 aa1.57□□□□□ -2.16
ECHDC1-213ENST00000474240 ERCC1P07992 297 aaPredicted RBP1.57□□□□□ -2.16
ECHDC1-213ENST00000474240 CLTAP09496 248 aa1.57□□□□□ -2.16
ECHDC1-213ENST00000474240 TCP1P17987 556 aaKnown RBP1.57□□□□□ -2.16
ECHDC1-213ENST00000474240 MPIP34949 423 aa1.57□□□□□ -2.16
ECHDC1-213ENST00000474240 BAMBIQ13145 260 aa1.57□□□□□ -2.16
ECHDC1-213ENST00000474240 HADHQ16836 314 aaKnown RBP1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms