RNA–Protein interactions for RNA: ENST00000474036.1

FN1-219, Transcript of fibronectin 1, human

TSL 2

Gene FN1, Length 1,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-219	ENST00000474036	EFNA3	P52797	238 aa		4.54	□□□□□ -1.68
FN1-219	ENST00000474036	OR2B6	P58173	313 aa		4.54	□□□□□ -1.68
FN1-219	ENST00000474036	OR12D2	P58182	307 aa		4.54	□□□□□ -1.68
FN1-219	ENST00000474036	PPP3R1	P63098	170 aa		4.54	□□□□□ -1.68
FN1-219	ENST00000474036	LGALS3BP	Q08380	585 aa		4.54	□□□□□ -1.68
FN1-219	ENST00000474036	ACSM1	Q08AH1	577 aa		4.54	□□□□□ -1.68
FN1-219	ENST00000474036	PLCXD2	Q0VAA5	305 aa		4.54	□□□□□ -1.68
FN1-219	ENST00000474036	CBX3	Q13185	183 aa		4.54	□□□□□ -1.68
FN1-219	ENST00000474036	SKP2	Q13309	424 aa		4.54	□□□□□ -1.68
FN1-219	ENST00000474036	KRR1	Q13601	381 aa	Known RBP	4.54	□□□□□ -1.68
FN1-219	ENST00000474036	ZNF79	Q15937	498 aa		4.54	□□□□□ -1.68
FN1-219	ENST00000474036	BAK1	Q16611	211 aa		4.54	□□□□□ -1.68
FN1-219	ENST00000474036	KLHL26	Q53HC5	615 aa		4.54	□□□□□ -1.68
FN1-219	ENST00000474036	IDNK	Q5T6J7	187 aa		4.54	□□□□□ -1.68
FN1-219	ENST00000474036	FAM27D1	Q5T7N8	215 aa		4.54	□□□□□ -1.68
FN1-219	ENST00000474036	WBP2NL	Q6ICG8	309 aa		4.54	□□□□□ -1.68
FN1-219	ENST00000474036	CNIH2	Q6PI25	160 aa		4.54	□□□□□ -1.68
FN1-219	ENST00000474036	CD200R1L	Q6Q8B3	271 aa		4.54	□□□□□ -1.68
FN1-219	ENST00000474036	APOOL	Q6UXV4	268 aa		4.54	□□□□□ -1.68
FN1-219	ENST00000474036	TMEM91	Q6ZNR0	172 aa		4.54	□□□□□ -1.68
FN1-219	ENST00000474036	RTL4	Q6ZR62	310 aa		4.54	□□□□□ -1.68
FN1-219	ENST00000474036	LANCL3	Q6ZV70	420 aa		4.54	□□□□□ -1.68
FN1-219	ENST00000474036	NDUFAF7	Q7L592	441 aa		4.54	□□□□□ -1.68
FN1-219	ENST00000474036	CEACAM19	Q7Z692	300 aa		4.54	□□□□□ -1.68
FN1-219	ENST00000474036	MARCH3	Q86UD3	253 aa		4.54	□□□□□ -1.68
FN1-219	ENST00000474036	AKAP14	Q86UN6	197 aa		4.54	□□□□□ -1.68
FN1-219	ENST00000474036	SIAH3	Q8IW03	269 aa		4.54	□□□□□ -1.68
FN1-219	ENST00000474036	ARIH2OS	Q8N7S6	290 aa		4.54	□□□□□ -1.68
FN1-219	ENST00000474036	LSMEM1	Q8N8F7	131 aa		4.54	□□□□□ -1.68
FN1-219	ENST00000474036	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	4.54	□□□□□ -1.68
FN1-219	ENST00000474036	TMEM178A	Q8NBL3	297 aa		4.54	□□□□□ -1.68
FN1-219	ENST00000474036	OR6K6	Q8NGW6	343 aa		4.54	□□□□□ -1.68
FN1-219	ENST00000474036	ZNF563	Q8TA94	476 aa		4.54	□□□□□ -1.68
FN1-219	ENST00000474036	LINC01560	Q8TB33	94 aa		4.54	□□□□□ -1.68
FN1-219	ENST00000474036	DNAJA4	Q8WW22	397 aa	Predicted RBP	4.54	□□□□□ -1.68
FN1-219	ENST00000474036	AP3S1	Q92572	193 aa		4.54	□□□□□ -1.68
FN1-219	ENST00000474036	TMCO6	Q96DC7	493 aa		4.54	□□□□□ -1.68
FN1-219	ENST00000474036	KTI12	Q96EK9	354 aa	Predicted RBP	4.54	□□□□□ -1.68
FN1-219	ENST00000474036	NMNAT3	Q96T66	252 aa		4.54	□□□□□ -1.68
FN1-219	ENST00000474036	CNN2	Q99439	309 aa	Known RBP	4.54	□□□□□ -1.68
FN1-219	ENST00000474036	CCL19	Q99731	98 aa		4.54	□□□□□ -1.68
FN1-219	ENST00000474036	UTP23	Q9BRU9	249 aa	Known RBP	4.54	□□□□□ -1.68
FN1-219	ENST00000474036	PIMREG	Q9BSJ6	248 aa		4.54	□□□□□ -1.68
FN1-219	ENST00000474036	ABHD14A	Q9BUJ0	271 aa		4.54	□□□□□ -1.68
FN1-219	ENST00000474036	ZNF426	Q9BUY5	554 aa		4.54	□□□□□ -1.68
FN1-219	ENST00000474036	PLEKHF2	Q9H8W4	249 aa		4.54	□□□□□ -1.68
FN1-219	ENST00000474036	WDR54	Q9H977	334 aa		4.54	□□□□□ -1.68
FN1-219	ENST00000474036	UBTD1	Q9HAC8	227 aa		4.54	□□□□□ -1.68
FN1-219	ENST00000474036	ZNF304	Q9HCX3	659 aa		4.54	□□□□□ -1.68
FN1-219	ENST00000474036	INPP5E	Q9NRR6	644 aa		4.54	□□□□□ -1.68
FN1-219	ENST00000474036	ALKBH4	Q9NXW9	302 aa		4.54	□□□□□ -1.68
FN1-219	ENST00000474036	CHRNA9	Q9UGM1	479 aa		4.54	□□□□□ -1.68
FN1-219	ENST00000474036	TEKT2	Q9UIF3	430 aa		4.54	□□□□□ -1.68
FN1-219	ENST00000474036	ZNF346	Q9UL40	294 aa	Known RBP	4.54	□□□□□ -1.68
FN1-219	ENST00000474036	ICAM5	Q9UMF0	924 aa		4.54	□□□□□ -1.68
FN1-219	ENST00000474036	MMACHC	Q9Y4U1	282 aa		4.54	□□□□□ -1.68
FN1-219	ENST00000474036	MED12L	Q86YW9	2145 aa		4.54	□□□□□ -1.68
FN1-219	ENST00000474036	IGKV3D-11	A0A0A0MRZ8	115 aa		4.53	□□□□□ -1.68
FN1-219	ENST00000474036	IGHV3-20	A0A0C4DH32	117 aa		4.53	□□□□□ -1.68
FN1-219	ENST00000474036		A0A1W2PPK0	400 aa		4.53	□□□□□ -1.68
FN1-219	ENST00000474036	PGPEP1L	A6NFU8	196 aa		4.53	□□□□□ -1.68
FN1-219	ENST00000474036	FRG2C	A6NGY1	282 aa		4.53	□□□□□ -1.68
FN1-219	ENST00000474036	TUBAL3	A6NHL2	446 aa		4.53	□□□□□ -1.68
FN1-219	ENST00000474036		A8MV72	311 aa	Predicted RBP	4.53	□□□□□ -1.68
FN1-219	ENST00000474036	NPIPA2	E9PIF3	369 aa		4.53	□□□□□ -1.68
FN1-219	ENST00000474036	NPIPA3	F8WFD2	350 aa		4.53	□□□□□ -1.68
FN1-219	ENST00000474036	BLOC1S5-TXNDC5	H3BN57	136 aa		4.53	□□□□□ -1.68
FN1-219	ENST00000474036		H7C1C5	153 aa		4.53	□□□□□ -1.68
FN1-219	ENST00000474036	ZNF264	O43296	627 aa		4.53	□□□□□ -1.68
FN1-219	ENST00000474036	HCRTR2	O43614	444 aa		4.53	□□□□□ -1.68
FN1-219	ENST00000474036	HEXB	P07686	556 aa		4.53	□□□□□ -1.68
FN1-219	ENST00000474036	CSF3	P09919	207 aa		4.53	□□□□□ -1.68
FN1-219	ENST00000474036	PNMT	P11086	282 aa		4.53	□□□□□ -1.68
FN1-219	ENST00000474036	SLC2A2	P11168	524 aa	Predicted RBP	4.53	□□□□□ -1.68
FN1-219	ENST00000474036	SPI1	P17947	270 aa		4.53	□□□□□ -1.68
FN1-219	ENST00000474036	EDNRA	P25101	427 aa		4.53	□□□□□ -1.68
FN1-219	ENST00000474036	RFX2	P48378	723 aa		4.53	□□□□□ -1.68
FN1-219	ENST00000474036	GDI2	P50395	445 aa	Known RBP	4.53	□□□□□ -1.68
FN1-219	ENST00000474036	NR0B1	P51843	470 aa	Known RBP	4.53	□□□□□ -1.68
FN1-219	ENST00000474036	GBX2	P52951	348 aa	Predicted RBP	4.53	□□□□□ -1.68
FN1-219	ENST00000474036	NKX2-5	P52952	324 aa	Predicted RBP	4.53	□□□□□ -1.68
FN1-219	ENST00000474036	OR10A3	P58181	314 aa		4.53	□□□□□ -1.68
FN1-219	ENST00000474036	TAS2R43	P59537	309 aa		4.53	□□□□□ -1.68
FN1-219	ENST00000474036	LCN6	P62502	163 aa		4.53	□□□□□ -1.68
FN1-219	ENST00000474036	ACTC1	P68032	377 aa		4.53	□□□□□ -1.68
FN1-219	ENST00000474036	ACTA1	P68133	377 aa		4.53	□□□□□ -1.68
FN1-219	ENST00000474036	BDH1	Q02338	343 aa		4.53	□□□□□ -1.68
FN1-219	ENST00000474036	ZNF117	Q03924	483 aa		4.53	□□□□□ -1.68
FN1-219	ENST00000474036	SCN1B	Q07699	218 aa		4.53	□□□□□ -1.68
FN1-219	ENST00000474036	SELENBP1	Q13228	472 aa		4.53	□□□□□ -1.68
FN1-219	ENST00000474036	IL18	Q14116	193 aa		4.53	□□□□□ -1.68
FN1-219	ENST00000474036	PON3	Q15166	354 aa		4.53	□□□□□ -1.68
FN1-219	ENST00000474036	NSDHL	Q15738	373 aa		4.53	□□□□□ -1.68
FN1-219	ENST00000474036	GLYR1	Q49A26	553 aa	Predicted RBP	4.53	□□□□□ -1.68
FN1-219	ENST00000474036	MIDN	Q504T8	468 aa		4.53	□□□□□ -1.68
FN1-219	ENST00000474036	PDLIM3	Q53GG5	364 aa	Predicted RBP	4.53	□□□□□ -1.68
FN1-219	ENST00000474036	TRIQK	Q629K1	86 aa		4.53	□□□□□ -1.68
FN1-219	ENST00000474036	DGAT2L7P	Q6IED9	249 aa		4.53	□□□□□ -1.68
FN1-219	ENST00000474036	LEG1	Q6P5S2	330 aa		4.53	□□□□□ -1.68
FN1-219	ENST00000474036	CBLN3	Q6UW01	205 aa		4.53	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms