RNA–Protein interactions for RNA: ENST00000472962.1

CCDC142-205, Transcript of coiled-coil domain containing 142, humanhuman

TSL 3

Gene CCDC142, Length 645 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-205ENST00000472962 CDKN2AP42771 156 aaKnown RBP12.8□□□□□ -0.36
CCDC142-205ENST00000472962 DLX1P56177 255 aa12.8□□□□□ -0.36
CCDC142-205ENST00000472962 HIST1H3AP68431 136 aa12.8□□□□□ -0.36
CCDC142-205ENST00000472962 C11orf91Q3C1V1 193 aa12.8□□□□□ -0.36
CCDC142-205ENST00000472962 SLC36A3Q495N2 470 aa12.8□□□□□ -0.36
CCDC142-205ENST00000472962 FGD3Q5JSP0 725 aa12.8□□□□□ -0.36
CCDC142-205ENST00000472962 HIST2H3PS2Q5TEC6 136 aa12.8□□□□□ -0.36
CCDC142-205ENST00000472962 COLCA1Q6ZS62 124 aa12.8□□□□□ -0.36
CCDC142-205ENST00000472962 HIST2H3AQ71DI3 136 aa12.8□□□□□ -0.36
CCDC142-205ENST00000472962 KLHDC1Q8N7A1 406 aa12.8□□□□□ -0.36
CCDC142-205ENST00000472962 PLPP7Q8NBV4 271 aa12.8□□□□□ -0.36
CCDC142-205ENST00000472962 FAM156AQ8NDB6 213 aa12.8□□□□□ -0.36
CCDC142-205ENST00000472962 OR4S1Q8NGB4 309 aa12.8□□□□□ -0.36
CCDC142-205ENST00000472962 OR2AE1Q8NHA4 323 aa12.8□□□□□ -0.36
CCDC142-205ENST00000472962 ERMAPQ96PL5 475 aaPredicted RBP12.8□□□□□ -0.36
CCDC142-205ENST00000472962 NRIP3Q9NQ35 241 aa12.8□□□□□ -0.36
CCDC142-205ENST00000472962 NECAP2Q9NVZ3 263 aa12.8□□□□□ -0.36
CCDC142-205ENST00000472962 NOTCH3Q9UM47 2321 aa12.8□□□□□ -0.36
CCDC142-205ENST00000472962 RNASEK-C17orf49H0YIS7 233 aa12.79□□□□□ -0.36
CCDC142-205ENST00000472962 H3BUX3 64 aa12.79□□□□□ -0.36
CCDC142-205ENST00000472962 M0R135 149 aa12.79□□□□□ -0.36
CCDC142-205ENST00000472962 FFAR1O14842 300 aa12.79□□□□□ -0.36
CCDC142-205ENST00000472962 POU1F1P28069 291 aa12.79□□□□□ -0.36
CCDC142-205ENST00000472962 SAA4P35542 130 aa12.79□□□□□ -0.36
CCDC142-205ENST00000472962 GMFBP60983 142 aa12.79□□□□□ -0.36
CCDC142-205ENST00000472962 RSPO1Q2MKA7 263 aaPredicted RBP12.79□□□□□ -0.36
CCDC142-205ENST00000472962 IFI44LQ53G44 452 aa12.79□□□□□ -0.36
CCDC142-205ENST00000472962 LRRC10Q5BKY1 277 aa12.79□□□□□ -0.36
CCDC142-205ENST00000472962 C11orf88Q6PI97 169 aa12.79□□□□□ -0.36
CCDC142-205ENST00000472962 TSEN54Q7Z6J9 526 aaKnown RBP12.79□□□□□ -0.36
CCDC142-205ENST00000472962 PNKDQ8N490 385 aa12.79□□□□□ -0.36
CCDC142-205ENST00000472962 GCSAMQ8N6F7 178 aa12.79□□□□□ -0.36
CCDC142-205ENST00000472962 LRRC29Q8WV35 223 aa12.79□□□□□ -0.36
CCDC142-205ENST00000472962 ZNF799Q96GE5 643 aa12.79□□□□□ -0.36
CCDC142-205ENST00000472962 RSRC1Q96IZ7 334 aaKnown RBP12.79□□□□□ -0.36
CCDC142-205ENST00000472962 FAM234AQ9H0X4 552 aa12.79□□□□□ -0.36
CCDC142-205ENST00000472962 KRCC1Q9NPI7 259 aaPredicted RBP12.79□□□□□ -0.36
CCDC142-205ENST00000472962 GID8Q9NWU2 228 aa12.79□□□□□ -0.36
CCDC142-205ENST00000472962 B9D1Q9UPM9 204 aa12.79□□□□□ -0.36
CCDC142-205ENST00000472962 SIGLEC7Q9Y286 467 aa12.79□□□□□ -0.36
CCDC142-205ENST00000472962 A0A1B0GW55 424 aa12.78□□□□□ -0.36
CCDC142-205ENST00000472962 DCTN6O00399 190 aa12.78□□□□□ -0.36
CCDC142-205ENST00000472962 PPP1R3DO95685 299 aa12.78□□□□□ -0.36
CCDC142-205ENST00000472962 NPPAP01160 153 aa12.78□□□□□ -0.36
CCDC142-205ENST00000472962 DUX4L2P0CJ85 424 aa12.78□□□□□ -0.36
CCDC142-205ENST00000472962 DUX4L3P0CJ86 424 aa12.78□□□□□ -0.36
CCDC142-205ENST00000472962 DUX4L4P0CJ87 422 aa12.78□□□□□ -0.36
CCDC142-205ENST00000472962 DUX4L5P0CJ88 424 aa12.78□□□□□ -0.36
CCDC142-205ENST00000472962 DUX4L6P0CJ89 424 aa12.78□□□□□ -0.36
CCDC142-205ENST00000472962 DUX4L7P0CJ90 424 aa12.78□□□□□ -0.36
CCDC142-205ENST00000472962 ZNF823P16415 610 aa12.78□□□□□ -0.36
CCDC142-205ENST00000472962 NOS3P29474 1203 aa12.78□□□□□ -0.36
CCDC142-205ENST00000472962 ZNF92Q03936 586 aa12.78□□□□□ -0.36
CCDC142-205ENST00000472962 TAF13Q15543 124 aa12.78□□□□□ -0.36
CCDC142-205ENST00000472962 SNAI3Q3KNW1 292 aa12.78□□□□□ -0.36
CCDC142-205ENST00000472962 WDR38Q5JTN6 314 aa12.78□□□□□ -0.36
CCDC142-205ENST00000472962 VAX1Q5SQQ9 334 aa12.78□□□□□ -0.36
CCDC142-205ENST00000472962 SLC18B1Q6NT16 456 aa12.78□□□□□ -0.36
CCDC142-205ENST00000472962 DUX4L9Q6RFH8 374 aaPredicted RBP12.78□□□□□ -0.36
CCDC142-205ENST00000472962 METAP1DQ6UB28 335 aaPredicted RBP12.78□□□□□ -0.36
CCDC142-205ENST00000472962 DPY19L2P2Q6ZN68 376 aa12.78□□□□□ -0.36
CCDC142-205ENST00000472962 FAM216BQ8N7L0 139 aa12.78□□□□□ -0.36
CCDC142-205ENST00000472962 OR51G2Q8NGK0 314 aa12.78□□□□□ -0.36
CCDC142-205ENST00000472962 NKX3-1Q99801 234 aaPredicted RBP12.78□□□□□ -0.36
CCDC142-205ENST00000472962 SSX3Q99909 188 aa12.78□□□□□ -0.36
CCDC142-205ENST00000472962 RPRD1BQ9NQG5 326 aaKnown RBP12.78□□□□□ -0.36
CCDC142-205ENST00000472962 MRPL15Q9P015 296 aaKnown RBP12.78□□□□□ -0.36
CCDC142-205ENST00000472962 DUX4Q9UBX2 424 aa12.78□□□□□ -0.36
CCDC142-205ENST00000472962 FAM32AQ9Y421 112 aaKnown RBP12.78□□□□□ -0.36
CCDC142-205ENST00000472962 A0A1W2PQ09 198 aa12.77□□□□□ -0.37
CCDC142-205ENST00000472962 UNC119BA6NIH7 251 aa12.77□□□□□ -0.37
CCDC142-205ENST00000472962 ANKRD30BLA7E2S9 258 aa12.77□□□□□ -0.37
CCDC142-205ENST00000472962 PEX14O75381 377 aa12.77□□□□□ -0.37
CCDC142-205ENST00000472962 FCN3O75636 299 aa12.77□□□□□ -0.37
CCDC142-205ENST00000472962 MUC1P15941 1255 aaPredicted RBP12.77□□□□□ -0.37
CCDC142-205ENST00000472962 BLMHQ13867 455 aa12.77□□□□□ -0.37
CCDC142-205ENST00000472962 PCK2Q16822 640 aa12.77□□□□□ -0.37
CCDC142-205ENST00000472962 RFX4Q33E94 735 aa12.77□□□□□ -0.37
CCDC142-205ENST00000472962 GLYATL3Q5SZD4 288 aa12.77□□□□□ -0.37
CCDC142-205ENST00000472962 ZBTB37Q5TC79 503 aa12.77□□□□□ -0.37
CCDC142-205ENST00000472962 AGBL2Q5U5Z8 902 aa12.77□□□□□ -0.37
CCDC142-205ENST00000472962 PGBD2Q6P3X8 592 aa12.77□□□□□ -0.37
CCDC142-205ENST00000472962 DPY19L4Q7Z388 723 aa12.77□□□□□ -0.37
CCDC142-205ENST00000472962 OR6V1Q8N148 313 aa12.77□□□□□ -0.37
CCDC142-205ENST00000472962 SLC26A10Q8NG04 563 aa12.77□□□□□ -0.37
CCDC142-205ENST00000472962 OR4K13Q8NH42 304 aa12.77□□□□□ -0.37
CCDC142-205ENST00000472962 R3HDM4Q96D70 268 aa12.77□□□□□ -0.37
CCDC142-205ENST00000472962 NMNAT3Q96T66 252 aa12.77□□□□□ -0.37
CCDC142-205ENST00000472962 RAB18Q9NP72 206 aa12.77□□□□□ -0.37
CCDC142-205ENST00000472962 INTS9Q9NV88 658 aaKnown RBP12.77□□□□□ -0.37
CCDC142-205ENST00000472962 AURKAIP1Q9NWT8 199 aaPredicted RBP12.77□□□□□ -0.37
CCDC142-205ENST00000472962 KAAG1Q9UBP8 84 aa12.77□□□□□ -0.37
CCDC142-205ENST00000472962 IGLV1-36A0A0B4J1U3 117 aa12.76□□□□□ -0.37
CCDC142-205ENST00000472962 LOC100653049A0A140TA62 436 aa12.76□□□□□ -0.37
CCDC142-205ENST00000472962 BBIP1A8MTZ0 92 aa12.76□□□□□ -0.37
CCDC142-205ENST00000472962 FXYD1O00168 92 aa12.76□□□□□ -0.37
CCDC142-205ENST00000472962 PTP4A3O75365 173 aa12.76□□□□□ -0.37
CCDC142-205ENST00000472962 KRT34O76011 436 aa12.76□□□□□ -0.37
CCDC142-205ENST00000472962 PTBP3O95758 552 aaKnown RBP12.76□□□□□ -0.37
CCDC142-205ENST00000472962 MPIG6BO95866 241 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms