RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 CLDN34H7C241 214 aa12.74□□□□□ -0.37
VTI1A-203ENST00000472892 PHYHO14832 338 aa12.74□□□□□ -0.37
VTI1A-203ENST00000472892 TNFRSF13BO14836 293 aaPredicted RBP12.74□□□□□ -0.37
VTI1A-203ENST00000472892 GYPBP06028 91 aa12.74□□□□□ -0.37
VTI1A-203ENST00000472892 SPARCP09486 303 aa12.74□□□□□ -0.37
VTI1A-203ENST00000472892 EGR1P18146 543 aa12.74□□□□□ -0.37
VTI1A-203ENST00000472892 PRKXP51817 358 aa12.74□□□□□ -0.37
VTI1A-203ENST00000472892 BLVRAP53004 296 aa12.74□□□□□ -0.37
VTI1A-203ENST00000472892 FOXL1Q12952 345 aa12.74□□□□□ -0.37
VTI1A-203ENST00000472892 BAMBIQ13145 260 aa12.74□□□□□ -0.37
VTI1A-203ENST00000472892 TAF13Q15543 124 aa12.74□□□□□ -0.37
VTI1A-203ENST00000472892 FAM98BQ52LJ0 330 aaKnown RBP12.74□□□□□ -0.37
VTI1A-203ENST00000472892 LINC01590Q5TEZ4 76 aa12.74□□□□□ -0.37
VTI1A-203ENST00000472892 CD300LDQ6UXZ3 194 aa12.74□□□□□ -0.37
VTI1A-203ENST00000472892 PARP8Q8N3A8 854 aa12.74□□□□□ -0.37
VTI1A-203ENST00000472892 SPERTQ8NA61 448 aa12.74□□□□□ -0.37
VTI1A-203ENST00000472892 C19orf18Q8NEA5 215 aa12.74□□□□□ -0.37
VTI1A-203ENST00000472892 SGMS2Q8NHU3 365 aa12.74□□□□□ -0.37
VTI1A-203ENST00000472892 SPSB4Q96A44 273 aa12.74□□□□□ -0.37
VTI1A-203ENST00000472892 CCT8L2Q96SF2 557 aa12.74□□□□□ -0.37
VTI1A-203ENST00000472892 NUDT16L1Q9BRJ7 211 aaKnown RBP12.74□□□□□ -0.37
VTI1A-203ENST00000472892 ADAT1Q9BUB4 502 aaKnown RBP12.74□□□□□ -0.37
VTI1A-203ENST00000472892 REEP1Q9H902 201 aa12.74□□□□□ -0.37
VTI1A-203ENST00000472892 CENPMQ9NSP4 180 aa12.74□□□□□ -0.37
VTI1A-203ENST00000472892 ARMC1Q9NVT9 282 aa12.74□□□□□ -0.37
VTI1A-203ENST00000472892 IGHV3OR16-10A0A075B7F0 116 aa12.73□□□□□ -0.37
VTI1A-203ENST00000472892 SOX14O95416 240 aa12.73□□□□□ -0.37
VTI1A-203ENST00000472892 IFNGP01579 166 aa12.73□□□□□ -0.37
VTI1A-203ENST00000472892 RNASE1P07998 156 aaKnown RBP12.73□□□□□ -0.37
VTI1A-203ENST00000472892 T-ENOLP0DO92 83 aa12.73□□□□□ -0.37
VTI1A-203ENST00000472892 CLUP10909 449 aa12.73□□□□□ -0.37
VTI1A-203ENST00000472892 MTNR1AP48039 350 aa12.73□□□□□ -0.37
VTI1A-203ENST00000472892 NPY4RP50391 375 aa12.73□□□□□ -0.37
VTI1A-203ENST00000472892 KCNJ8Q15842 424 aa12.73□□□□□ -0.37
VTI1A-203ENST00000472892 DUX5Q96PT3 197 aa12.73□□□□□ -0.37
VTI1A-203ENST00000472892 OPA3Q9H6K4 179 aa12.73□□□□□ -0.37
VTI1A-203ENST00000472892 CMC2Q9NRP2 79 aa12.73□□□□□ -0.37
VTI1A-203ENST00000472892 SOX21Q9Y651 276 aaPredicted RBP12.73□□□□□ -0.37
VTI1A-203ENST00000472892 DHRS12A0PJE2 317 aa12.72□□□□□ -0.37
VTI1A-203ENST00000472892 RIIAD1A6NNX1 92 aa12.72□□□□□ -0.37
VTI1A-203ENST00000472892 ZNF878C9JN71 531 aa12.72□□□□□ -0.37
VTI1A-203ENST00000472892 LGALS8O00214 317 aa12.72□□□□□ -0.37
VTI1A-203ENST00000472892 SLC2A1P11166 492 aa12.72□□□□□ -0.37
VTI1A-203ENST00000472892 CALB2P22676 271 aa12.72□□□□□ -0.37
VTI1A-203ENST00000472892 DDOSTP39656 456 aa12.72□□□□□ -0.37
VTI1A-203ENST00000472892 SLC15A1P46059 708 aa12.72□□□□□ -0.37
VTI1A-203ENST00000472892 GRB2P62993 217 aaKnown RBP12.72□□□□□ -0.37
VTI1A-203ENST00000472892 HOXA4Q00056 320 aaPredicted RBP12.72□□□□□ -0.37
VTI1A-203ENST00000472892 MZT1Q08AG7 82 aa12.72□□□□□ -0.37
VTI1A-203ENST00000472892 GK3PQ14409 553 aa12.72□□□□□ -0.37
VTI1A-203ENST00000472892 SLC9A3R2Q15599 337 aa12.72□□□□□ -0.37
VTI1A-203ENST00000472892 SFRP4Q6FHJ7 346 aaPredicted RBP12.72□□□□□ -0.37
VTI1A-203ENST00000472892 OR56B2PQ8NGI1 322 aa12.72□□□□□ -0.37
VTI1A-203ENST00000472892 OR6K6Q8NGW6 343 aa12.72□□□□□ -0.37
VTI1A-203ENST00000472892 SGK3Q96BR1 496 aa12.72□□□□□ -0.37
VTI1A-203ENST00000472892 NIPSNAP1Q9BPW8 284 aa12.72□□□□□ -0.37
VTI1A-203ENST00000472892 ZNF747Q9BV97 191 aa12.72□□□□□ -0.37
VTI1A-203ENST00000472892 PRDM13Q9H4Q3 707 aa12.72□□□□□ -0.37
VTI1A-203ENST00000472892 PRPF19Q9UMS4 504 aaKnown RBP12.72□□□□□ -0.37
VTI1A-203ENST00000472892 N6AMT1Q9Y5N5 214 aa12.72□□□□□ -0.37
VTI1A-203ENST00000472892 TRAV38-1A0A0B4J264 116 aa12.71□□□□□ -0.37
VTI1A-203ENST00000472892 C22orf46C9J442 243 aa12.71□□□□□ -0.37
VTI1A-203ENST00000472892 XRCC2O43543 280 aa12.71□□□□□ -0.37
VTI1A-203ENST00000472892 NDUFA2O43678 99 aa12.71□□□□□ -0.37
VTI1A-203ENST00000472892 ENSAO43768 121 aaKnown RBP12.71□□□□□ -0.37
VTI1A-203ENST00000472892 LHBP01229 141 aa12.71□□□□□ -0.37
VTI1A-203ENST00000472892 RAP2AP10114 183 aa12.71□□□□□ -0.37
VTI1A-203ENST00000472892 ZNF3P17036 446 aa12.71□□□□□ -0.37
VTI1A-203ENST00000472892 BPIFB3P59826 476 aa12.71□□□□□ -0.37
VTI1A-203ENST00000472892 FGF12P61328 243 aa12.71□□□□□ -0.37
VTI1A-203ENST00000472892 FAM3AP98173 230 aa12.71□□□□□ -0.37
VTI1A-203ENST00000472892 CD276Q5ZPR3 534 aa12.71□□□□□ -0.37
VTI1A-203ENST00000472892 SPATC1Q76KD6 591 aa12.71□□□□□ -0.37
VTI1A-203ENST00000472892 RHOUQ7L0Q8 258 aa12.71□□□□□ -0.37
VTI1A-203ENST00000472892 PRSS45Q7RTY3 260 aa12.71□□□□□ -0.37
VTI1A-203ENST00000472892 OR10G2Q8NGC3 310 aa12.71□□□□□ -0.37
VTI1A-203ENST00000472892 SLC25A28Q96A46 364 aa12.71□□□□□ -0.37
VTI1A-203ENST00000472892 ASB9Q96DX5 294 aa12.71□□□□□ -0.37
VTI1A-203ENST00000472892 FEVQ99581 238 aa12.71□□□□□ -0.37
VTI1A-203ENST00000472892 CHID1Q9BWS9 393 aa12.71□□□□□ -0.37
VTI1A-203ENST00000472892 TOR3AQ9H497 397 aa12.71□□□□□ -0.37
VTI1A-203ENST00000472892 MARCH7Q9H992 704 aa12.71□□□□□ -0.37
VTI1A-203ENST00000472892 TRIM36Q9NQ86 728 aa12.71□□□□□ -0.37
VTI1A-203ENST00000472892 C14orf119Q9NWQ9 140 aa12.71□□□□□ -0.37
VTI1A-203ENST00000472892 C1orf123Q9NWV4 160 aa12.71□□□□□ -0.37
VTI1A-203ENST00000472892 ERVK-18Q9QC07 812 aa12.71□□□□□ -0.37
VTI1A-203ENST00000472892 CTSZQ9UBR2 303 aa12.71□□□□□ -0.37
VTI1A-203ENST00000472892 DOCK11Q5JSL3 2073 aa12.7□□□□□ -0.38
VTI1A-203ENST00000472892 TRAV40A0A0B4J280 105 aa12.7□□□□□ -0.38
VTI1A-203ENST00000472892 ARRDC5A6NEK1 342 aa12.7□□□□□ -0.38
VTI1A-203ENST00000472892 OOEPA6NGQ2 149 aa12.7□□□□□ -0.38
VTI1A-203ENST00000472892 ACOT8O14734 319 aa12.7□□□□□ -0.38
VTI1A-203ENST00000472892 SPRY1O43609 319 aaPredicted RBP12.7□□□□□ -0.38
VTI1A-203ENST00000472892 APOC1P02654 83 aa12.7□□□□□ -0.38
VTI1A-203ENST00000472892 LIPFP07098 398 aa12.7□□□□□ -0.38
VTI1A-203ENST00000472892 GRPP07492 148 aa12.7□□□□□ -0.38
VTI1A-203ENST00000472892 GSTT1P30711 240 aa12.7□□□□□ -0.38
VTI1A-203ENST00000472892 GRK5P34947 590 aa12.7□□□□□ -0.38
VTI1A-203ENST00000472892 CX3CR1P49238 355 aa12.7□□□□□ -0.38
VTI1A-203ENST00000472892 EIF2B1Q14232 305 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms