RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 BRD7Q9NPI1 651 aa16.36■□□□□ 0.21
COMMD1-208ENST00000472729 UFSP2Q9NUQ7 469 aa16.36■□□□□ 0.21
COMMD1-208ENST00000472729 C14orf119Q9NWQ9 140 aa16.36■□□□□ 0.21
COMMD1-208ENST00000472729 H2AFY2Q9P0M6 372 aaPredicted RBP16.36■□□□□ 0.21
COMMD1-208ENST00000472729 A0A0A6YYJ9 748 aa16.35■□□□□ 0.21
COMMD1-208ENST00000472729 G3V2T6 193 aa16.35■□□□□ 0.21
COMMD1-208ENST00000472729 FASP25445 335 aa16.35■□□□□ 0.21
COMMD1-208ENST00000472729 GNALP38405 381 aa16.35■□□□□ 0.21
COMMD1-208ENST00000472729 CD200P41217 278 aa16.35■□□□□ 0.21
COMMD1-208ENST00000472729 CDK5Q00535 292 aa16.35■□□□□ 0.21
COMMD1-208ENST00000472729 SNCBQ16143 134 aa16.35■□□□□ 0.21
COMMD1-208ENST00000472729 SLC35D3Q5M8T2 416 aa16.35■□□□□ 0.21
COMMD1-208ENST00000472729 FAM57BQ71RH2 274 aa16.35■□□□□ 0.21
COMMD1-208ENST00000472729 ZDHHC13Q8IUH4 622 aa16.35■□□□□ 0.21
COMMD1-208ENST00000472729 PHC2Q8IXK0 858 aa16.35■□□□□ 0.21
COMMD1-208ENST00000472729 OR5K1Q8NHB7 308 aa16.35■□□□□ 0.21
COMMD1-208ENST00000472729 PGAM5Q96HS1 289 aa16.35■□□□□ 0.21
COMMD1-208ENST00000472729 SIGLEC11Q96RL6 698 aa16.35■□□□□ 0.21
COMMD1-208ENST00000472729 ENOPH1Q9UHY7 261 aa16.35■□□□□ 0.21
COMMD1-208ENST00000472729 LAMP5Q9UJQ1 280 aa16.35■□□□□ 0.21
COMMD1-208ENST00000472729 LRCH1Q9Y2L9 728 aa16.35■□□□□ 0.21
COMMD1-208ENST00000472729 AP4S1Q9Y587 144 aa16.35■□□□□ 0.21
COMMD1-208ENST00000472729 PPIAL4CA0A0B4J2A2 164 aa16.34■□□□□ 0.21
COMMD1-208ENST00000472729 A6NLC8 198 aa16.34■□□□□ 0.21
COMMD1-208ENST00000472729 CEACAM18A8MTB9 384 aa16.34■□□□□ 0.21
COMMD1-208ENST00000472729 PSKH1P11801 424 aa16.34■□□□□ 0.21
COMMD1-208ENST00000472729 FCGR1AP12314 374 aa16.34■□□□□ 0.21
COMMD1-208ENST00000472729 EPHA1P21709 976 aa16.34■□□□□ 0.21
COMMD1-208ENST00000472729 FPR2P25090 351 aa16.34■□□□□ 0.21
COMMD1-208ENST00000472729 GATA4P43694 442 aa16.34■□□□□ 0.21
COMMD1-208ENST00000472729 CRISP1P54107 249 aa16.34■□□□□ 0.21
COMMD1-208ENST00000472729 GNB2P62879 340 aa16.34■□□□□ 0.21
COMMD1-208ENST00000472729 HNRNPA0Q13151 305 aaKnown RBP16.34■□□□□ 0.21
COMMD1-208ENST00000472729 LCN1P1Q5VSP4 162 aa16.34■□□□□ 0.21
COMMD1-208ENST00000472729 TMEM236Q5W0B7 351 aa16.34■□□□□ 0.21
COMMD1-208ENST00000472729 BTNL3Q6UXE8 466 aa16.34■□□□□ 0.21
COMMD1-208ENST00000472729 TIGD4Q8IY51 512 aa16.34■□□□□ 0.21
COMMD1-208ENST00000472729 BPIFB2Q8N4F0 458 aa16.34■□□□□ 0.21
COMMD1-208ENST00000472729 PLPP7Q8NBV4 271 aa16.34■□□□□ 0.21
COMMD1-208ENST00000472729 OR8B3Q8NGG8 313 aa16.34■□□□□ 0.21
COMMD1-208ENST00000472729 OR56B2PQ8NGI1 322 aa16.34■□□□□ 0.21
COMMD1-208ENST00000472729 OTOSQ8NHW6 89 aa16.34■□□□□ 0.21
COMMD1-208ENST00000472729 REEP6Q96HR9 211 aa16.34■□□□□ 0.21
COMMD1-208ENST00000472729 OR8B2Q96RD0 313 aa16.34■□□□□ 0.21
COMMD1-208ENST00000472729 JMJD8Q96S16 334 aa16.34■□□□□ 0.21
COMMD1-208ENST00000472729 SSBP3Q9BWW4 388 aaPredicted RBP16.34■□□□□ 0.21
COMMD1-208ENST00000472729 TMPRSS13Q9BYE2 586 aa16.34■□□□□ 0.21
COMMD1-208ENST00000472729 RGCCQ9H4X1 137 aa16.34■□□□□ 0.21
COMMD1-208ENST00000472729 KRT84Q9NSB2 600 aa16.34■□□□□ 0.21
COMMD1-208ENST00000472729 MALRD1Q5VYJ5 2156 aa16.33■□□□□ 0.2
COMMD1-208ENST00000472729 SELENOFO60613 162 aa16.33■□□□□ 0.2
COMMD1-208ENST00000472729 GRPP07492 148 aa16.33■□□□□ 0.2
COMMD1-208ENST00000472729 ZFP36P26651 326 aaKnown RBP16.33■□□□□ 0.2
COMMD1-208ENST00000472729 NAA10P41227 235 aaPredicted RBP16.33■□□□□ 0.2
COMMD1-208ENST00000472729 ZNF121P58317 390 aaPredicted RBP16.33■□□□□ 0.2
COMMD1-208ENST00000472729 ESRRGP62508 458 aa16.33■□□□□ 0.2
COMMD1-208ENST00000472729 MAB21L1Q13394 359 aa16.33■□□□□ 0.2
COMMD1-208ENST00000472729 KRTAP24-1Q3LI83 254 aa16.33■□□□□ 0.2
COMMD1-208ENST00000472729 PRAMEF6Q5VXH4 476 aa16.33■□□□□ 0.2
COMMD1-208ENST00000472729 RBMS3Q6XE24 437 aaKnown RBP16.33■□□□□ 0.2
COMMD1-208ENST00000472729 C1QL2Q7Z5L3 287 aa16.33■□□□□ 0.2
COMMD1-208ENST00000472729 KRT77Q7Z794 578 aa16.33■□□□□ 0.2
COMMD1-208ENST00000472729 BOLLQ8N9W6 283 aaKnown RBP16.33■□□□□ 0.2
COMMD1-208ENST00000472729 NEIL1Q96FI4 390 aaPredicted RBP16.33■□□□□ 0.2
COMMD1-208ENST00000472729 C19orf24Q9BVV8 132 aa16.33■□□□□ 0.2
COMMD1-208ENST00000472729 MARCH7Q9H992 704 aa16.33■□□□□ 0.2
COMMD1-208ENST00000472729 TMEM165Q9HC07 324 aa16.33■□□□□ 0.2
COMMD1-208ENST00000472729 SLC25A19Q9HC21 320 aa16.33■□□□□ 0.2
COMMD1-208ENST00000472729 TRIM36Q9NQ86 728 aa16.33■□□□□ 0.2
COMMD1-208ENST00000472729 RNF7Q9UBF6 113 aa16.33■□□□□ 0.2
COMMD1-208ENST00000472729 AUP1Q9Y679 476 aa16.33■□□□□ 0.2
COMMD1-208ENST00000472729 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.33■□□□□ 0.22e-12■■■■■ 46.8
COMMD1-208ENST00000472729 A0A1B0GWJ7 208 aa16.32■□□□□ 0.2
COMMD1-208ENST00000472729 hCG_1807616A0A1W2PRN6 198 aa16.32■□□□□ 0.2
COMMD1-208ENST00000472729 FAM20BO75063 409 aa16.32■□□□□ 0.2
COMMD1-208ENST00000472729 ADRA2CP18825 462 aa16.32■□□□□ 0.2
COMMD1-208ENST00000472729 RBMXP38159 391 aaKnown RBP16.32■□□□□ 0.2
COMMD1-208ENST00000472729 OPRL1P41146 370 aa16.32■□□□□ 0.2
COMMD1-208ENST00000472729 SRSF2Q01130 221 aaKnown RBP16.32■□□□□ 0.2
COMMD1-208ENST00000472729 APOFQ13790 326 aa16.32■□□□□ 0.2
COMMD1-208ENST00000472729 OR8B8Q15620 311 aa16.32■□□□□ 0.2
COMMD1-208ENST00000472729 ATP6AP1Q15904 470 aa16.32■□□□□ 0.2
COMMD1-208ENST00000472729 ARMCX4Q5H9R4 360 aa16.32■□□□□ 0.2
COMMD1-208ENST00000472729 KCTD18Q6PI47 426 aaPredicted RBP16.32■□□□□ 0.2
COMMD1-208ENST00000472729 SLC16A9Q7RTY1 509 aa16.32■□□□□ 0.2
COMMD1-208ENST00000472729 PARP8Q8N3A8 854 aa16.32■□□□□ 0.2
COMMD1-208ENST00000472729 DEFB108BQ8NET1 73 aa16.32■□□□□ 0.2
COMMD1-208ENST00000472729 Q8TCH9 128 aa16.32■□□□□ 0.2
COMMD1-208ENST00000472729 SUCNR1Q9BXA5 334 aa16.32■□□□□ 0.2
COMMD1-208ENST00000472729 NIPAL2Q9H841 368 aa16.32■□□□□ 0.2
COMMD1-208ENST00000472729 ANXA2P2A6NMY6 339 aa16.31■□□□□ 0.2
COMMD1-208ENST00000472729 FSTL3O95633 263 aa16.31■□□□□ 0.2
COMMD1-208ENST00000472729 WNT2P09544 360 aa16.31■□□□□ 0.2
COMMD1-208ENST00000472729 PTGES3Q15185 160 aaKnown RBP16.31■□□□□ 0.2
COMMD1-208ENST00000472729 FAHD1Q6P587 224 aa16.31■□□□□ 0.2
COMMD1-208ENST00000472729 CSNK2A3Q8NEV1 391 aa16.31■□□□□ 0.2
COMMD1-208ENST00000472729 UTP4Q969X6 686 aaKnown RBP16.31■□□□□ 0.2
COMMD1-208ENST00000472729 SPSB4Q96A44 273 aa16.31■□□□□ 0.2
COMMD1-208ENST00000472729 SGK3Q96BR1 496 aa16.31■□□□□ 0.2
COMMD1-208ENST00000472729 TMEM246Q9BRR3 403 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms