RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 ERGIC1Q969X5 290 aa7.54□□□□□ -1.2
USF1-204ENST00000472217 DACT3Q96B18 629 aaPredicted RBP7.54□□□□□ -1.2
USF1-204ENST00000472217 OTULINQ96BN8 352 aa7.54□□□□□ -1.2
USF1-204ENST00000472217 NEIL1Q96FI4 390 aaPredicted RBP7.54□□□□□ -1.2
USF1-204ENST00000472217 OR8B2Q96RD0 313 aa7.54□□□□□ -1.2
USF1-204ENST00000472217 INTS14Q96SY0 518 aa7.54□□□□□ -1.2
USF1-204ENST00000472217 MRI1Q9BV20 369 aa7.54□□□□□ -1.2
USF1-204ENST00000472217 ABHD6Q9BV23 337 aa7.54□□□□□ -1.2
USF1-204ENST00000472217 OPA3Q9H6K4 179 aa7.54□□□□□ -1.2
USF1-204ENST00000472217 MARCH7Q9H992 704 aa7.54□□□□□ -1.2
USF1-204ENST00000472217 ZNF69Q9UC07 566 aa7.54□□□□□ -1.2
USF1-204ENST00000472217 NUP50Q9UKX7 468 aa7.54□□□□□ -1.2
USF1-204ENST00000472217 NOP16Q9Y3C1 178 aaKnown RBP7.54□□□□□ -1.2
USF1-204ENST00000472217 N6AMT1Q9Y5N5 214 aa7.54□□□□□ -1.2
USF1-204ENST00000472217 IGHV2-70DA0A0C4DH43 119 aa7.53□□□□□ -1.2
USF1-204ENST00000472217 GNGT2O14610 69 aa7.53□□□□□ -1.2
USF1-204ENST00000472217 TBX1O43435 398 aa7.53□□□□□ -1.2
USF1-204ENST00000472217 XRCC2O43543 280 aa7.53□□□□□ -1.2
USF1-204ENST00000472217 GLCEO94923 617 aa7.53□□□□□ -1.2
USF1-204ENST00000472217 ANXA2P07355 339 aaKnown RBP7.53□□□□□ -1.2
USF1-204ENST00000472217 POU1F1P28069 291 aa7.53□□□□□ -1.2
USF1-204ENST00000472217 HSD11B1P28845 292 aa7.53□□□□□ -1.2
USF1-204ENST00000472217 GSTT1P30711 240 aa7.53□□□□□ -1.2
USF1-204ENST00000472217 SLC15A1P46059 708 aa7.53□□□□□ -1.2
USF1-204ENST00000472217 CX3CR1P49238 355 aa7.53□□□□□ -1.2
USF1-204ENST00000472217 UBA52P62987 128 aaKnown RBP7.53□□□□□ -1.2
USF1-204ENST00000472217 GRB2P62993 217 aaKnown RBP7.53□□□□□ -1.2
USF1-204ENST00000472217 PAX8Q06710 450 aa7.53□□□□□ -1.2
USF1-204ENST00000472217 FLOT2Q14254 428 aa7.53□□□□□ -1.2
USF1-204ENST00000472217 BTNL3Q6UXE8 466 aa7.53□□□□□ -1.2
USF1-204ENST00000472217 DCDC5Q6ZRR9 648 aa7.53□□□□□ -1.2
USF1-204ENST00000472217 NLRC3Q7RTR2 1065 aa7.53□□□□□ -1.2
USF1-204ENST00000472217 ERI1Q8IV48 349 aaKnown RBP7.53□□□□□ -1.2
USF1-204ENST00000472217 TIGD4Q8IY51 512 aa7.53□□□□□ -1.2
USF1-204ENST00000472217 HS3ST5Q8IZT8 346 aa7.53□□□□□ -1.2
USF1-204ENST00000472217 BCL6BQ8N143 479 aaPredicted RBP7.53□□□□□ -1.2
USF1-204ENST00000472217 SIGLECL1Q8N7X8 197 aa7.53□□□□□ -1.2
USF1-204ENST00000472217 RNF133Q8WVZ7 376 aa7.53□□□□□ -1.2
USF1-204ENST00000472217 RAB40AQ8WXH6 277 aa7.53□□□□□ -1.2
USF1-204ENST00000472217 SPSB4Q96A44 273 aa7.53□□□□□ -1.2
USF1-204ENST00000472217 PLEKHA8Q96JA3 519 aa7.53□□□□□ -1.2
USF1-204ENST00000472217 AMELYQ99218 206 aa7.53□□□□□ -1.2
USF1-204ENST00000472217 FN3KRPQ9HA64 309 aa7.53□□□□□ -1.2
USF1-204ENST00000472217 DNAJC27Q9NZQ0 273 aa7.53□□□□□ -1.2
USF1-204ENST00000472217 MRPL15Q9P015 296 aaKnown RBP7.53□□□□□ -1.2
USF1-204ENST00000472217 PDP1Q9P0J1 537 aaPredicted RBP7.53□□□□□ -1.2
USF1-204ENST00000472217 RNF7Q9UBF6 113 aa7.53□□□□□ -1.2
USF1-204ENST00000472217 CLN8Q9UBY8 286 aa7.53□□□□□ -1.2
USF1-204ENST00000472217 IGHV3OR16-10A0A075B7F0 116 aa7.52□□□□□ -1.21
USF1-204ENST00000472217 TMEM89A2RUT3 159 aa7.52□□□□□ -1.21
USF1-204ENST00000472217 PRR23D1E9PI22 279 aaPredicted RBP7.52□□□□□ -1.21
USF1-204ENST00000472217 PHYHO14832 338 aa7.52□□□□□ -1.21
USF1-204ENST00000472217 GYG2O15488 501 aa7.52□□□□□ -1.21
USF1-204ENST00000472217 E2F6O75461 281 aa7.52□□□□□ -1.21
USF1-204ENST00000472217 GRPP07492 148 aa7.52□□□□□ -1.21
USF1-204ENST00000472217 PRR23D2P0DMB1 279 aaPredicted RBP7.52□□□□□ -1.21
USF1-204ENST00000472217 IGHV4-38-2P0DP08 117 aa7.52□□□□□ -1.21
USF1-204ENST00000472217 OSMP13725 252 aa7.52□□□□□ -1.21
USF1-204ENST00000472217 HOXB6P17509 224 aaKnown RBP7.52□□□□□ -1.21
USF1-204ENST00000472217 PAICSP22234 425 aaKnown RBP7.52□□□□□ -1.21
USF1-204ENST00000472217 PRKACGP22612 351 aa7.52□□□□□ -1.21
USF1-204ENST00000472217 CFPP27918 469 aa7.52□□□□□ -1.21
USF1-204ENST00000472217 PSMB10P40306 273 aa7.52□□□□□ -1.21
USF1-204ENST00000472217 OPRL1P41146 370 aa7.52□□□□□ -1.21
USF1-204ENST00000472217 COMPP49747 757 aaPredicted RBP7.52□□□□□ -1.21
USF1-204ENST00000472217 ZNF121P58317 390 aaPredicted RBP7.52□□□□□ -1.21
USF1-204ENST00000472217 CBX1P83916 185 aa7.52□□□□□ -1.21
USF1-204ENST00000472217 FAM3AP98173 230 aa7.52□□□□□ -1.21
USF1-204ENST00000472217 GINS1Q14691 196 aa7.52□□□□□ -1.21
USF1-204ENST00000472217 TIGD6Q17RP2 521 aa7.52□□□□□ -1.21
USF1-204ENST00000472217 GFOD2Q3B7J2 385 aa7.52□□□□□ -1.21
USF1-204ENST00000472217 DNAL1Q4LDG9 190 aa7.52□□□□□ -1.21
USF1-204ENST00000472217 WDR25Q64LD2 544 aaPredicted RBP7.52□□□□□ -1.21
USF1-204ENST00000472217 SFRP4Q6FHJ7 346 aaPredicted RBP7.52□□□□□ -1.21
USF1-204ENST00000472217 PLBD1Q6P4A8 553 aa7.52□□□□□ -1.21
USF1-204ENST00000472217 LRRN1Q6UXK5 716 aa7.52□□□□□ -1.21
USF1-204ENST00000472217 ZNF841Q6ZN19 808 aa7.52□□□□□ -1.21
USF1-204ENST00000472217 ZNF826PQ6ZT77 177 aa7.52□□□□□ -1.21
USF1-204ENST00000472217 FAM57BQ71RH2 274 aa7.52□□□□□ -1.21
USF1-204ENST00000472217 SHFQ7M4L6 423 aa7.52□□□□□ -1.21
USF1-204ENST00000472217 SLC16A9Q7RTY1 509 aa7.52□□□□□ -1.21
USF1-204ENST00000472217 PRSS45Q7RTY3 260 aa7.52□□□□□ -1.21
USF1-204ENST00000472217 SPATA24Q86W54 205 aa7.52□□□□□ -1.21
USF1-204ENST00000472217 PARP8Q8N3A8 854 aa7.52□□□□□ -1.21
USF1-204ENST00000472217 BOLLQ8N9W6 283 aaKnown RBP7.52□□□□□ -1.21
USF1-204ENST00000472217 SPERTQ8NA61 448 aa7.52□□□□□ -1.21
USF1-204ENST00000472217 PLPP7Q8NBV4 271 aa7.52□□□□□ -1.21
USF1-204ENST00000472217 BCAS4Q8TDM0 211 aa7.52□□□□□ -1.21
USF1-204ENST00000472217 GCDHQ92947 438 aaPredicted RBP7.52□□□□□ -1.21
USF1-204ENST00000472217 SGK3Q96BR1 496 aa7.52□□□□□ -1.21
USF1-204ENST00000472217 UPRTQ96BW1 309 aa7.52□□□□□ -1.21
USF1-204ENST00000472217 SLC7A6OSQ96CW6 309 aaPredicted RBP7.52□□□□□ -1.21
USF1-204ENST00000472217 ZMYND19Q96E35 227 aaPredicted RBP7.52□□□□□ -1.21
USF1-204ENST00000472217 REEP6Q96HR9 211 aa7.52□□□□□ -1.21
USF1-204ENST00000472217 ZNF48Q96MX3 618 aaPredicted RBP7.52□□□□□ -1.21
USF1-204ENST00000472217 NUDT16L1Q9BRJ7 211 aaKnown RBP7.52□□□□□ -1.21
USF1-204ENST00000472217 OR51V1Q9H2C8 321 aa7.52□□□□□ -1.21
USF1-204ENST00000472217 MMADHCQ9H3L0 296 aaPredicted RBP7.52□□□□□ -1.21
USF1-204ENST00000472217 TOR3AQ9H497 397 aa7.52□□□□□ -1.21
USF1-204ENST00000472217 SP140LQ9H930 580 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms