RNA–Protein interactions for RNA: ENST00000471459.1

HOXB3-206, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-206ENST00000471459 ZFAND2BQ8WV99 257 aa12.53□□□□□ -0.4
HOXB3-206ENST00000471459 SLC7A6OSQ96CW6 309 aaPredicted RBP12.53□□□□□ -0.4
HOXB3-206ENST00000471459 NEIL1Q96FI4 390 aaPredicted RBP12.53□□□□□ -0.4
HOXB3-206ENST00000471459 ADAT1Q9BUB4 502 aaKnown RBP12.53□□□□□ -0.4
HOXB3-206ENST00000471459 ABHD6Q9BV23 337 aa12.53□□□□□ -0.4
HOXB3-206ENST00000471459 SUCNR1Q9BXA5 334 aa12.53□□□□□ -0.4
HOXB3-206ENST00000471459 OR10A2Q9H208 303 aa12.53□□□□□ -0.4
HOXB3-206ENST00000471459 TMEM165Q9HC07 324 aa12.53□□□□□ -0.4
HOXB3-206ENST00000471459 TRIM36Q9NQ86 728 aa12.53□□□□□ -0.4
HOXB3-206ENST00000471459 UFSP2Q9NUQ7 469 aa12.53□□□□□ -0.4
HOXB3-206ENST00000471459 POLR3KQ9Y2Y1 108 aaPredicted RBP12.53□□□□□ -0.4
HOXB3-206ENST00000471459 AUP1Q9Y679 476 aa12.53□□□□□ -0.4
HOXB3-206ENST00000471459 CEACAM18A8MTB9 384 aa12.52□□□□□ -0.41
HOXB3-206ENST00000471459 PRODHO43272 600 aa12.52□□□□□ -0.41
HOXB3-206ENST00000471459 ZNF205O95201 554 aa12.52□□□□□ -0.41
HOXB3-206ENST00000471459 SLC2A1P11166 492 aa12.52□□□□□ -0.41
HOXB3-206ENST00000471459 ZFP36P26651 326 aaKnown RBP12.52□□□□□ -0.41
HOXB3-206ENST00000471459 GNB2P62879 340 aa12.52□□□□□ -0.41
HOXB3-206ENST00000471459 SRSF2Q01130 221 aaKnown RBP12.52□□□□□ -0.41
HOXB3-206ENST00000471459 MAB21L1Q13394 359 aa12.52□□□□□ -0.41
HOXB3-206ENST00000471459 SLC35D3Q5M8T2 416 aa12.52□□□□□ -0.41
HOXB3-206ENST00000471459 LINC01590Q5TEZ4 76 aa12.52□□□□□ -0.41
HOXB3-206ENST00000471459 USP43Q70EL4 1123 aa12.52□□□□□ -0.41
HOXB3-206ENST00000471459 TMEM179BQ7Z7N9 219 aa12.52□□□□□ -0.41
HOXB3-206ENST00000471459 FTMTQ8N4E7 242 aa12.52□□□□□ -0.41
HOXB3-206ENST00000471459 OR8B3Q8NGG8 313 aa12.52□□□□□ -0.41
HOXB3-206ENST00000471459 OR8S1Q8NH09 359 aa12.52□□□□□ -0.41
HOXB3-206ENST00000471459 RNF133Q8WVZ7 376 aa12.52□□□□□ -0.41
HOXB3-206ENST00000471459 OR8B2Q96RD0 313 aa12.52□□□□□ -0.41
HOXB3-206ENST00000471459 SSBP3Q9BWW4 388 aaPredicted RBP12.52□□□□□ -0.41
HOXB3-206ENST00000471459 PRRG3Q9BZD7 231 aa12.52□□□□□ -0.41
HOXB3-206ENST00000471459 MMADHCQ9H3L0 296 aaPredicted RBP12.52□□□□□ -0.41
HOXB3-206ENST00000471459 RNF7Q9UBF6 113 aa12.52□□□□□ -0.41
HOXB3-206ENST00000471459 STAB1Q9NY15 2570 aa12.52□□□□□ -0.41
HOXB3-206ENST00000471459 TRIM77I1YAP6 450 aa12.51□□□□□ -0.41
HOXB3-206ENST00000471459 AVPP01185 164 aa12.51□□□□□ -0.41
HOXB3-206ENST00000471459 LYNP07948 512 aa12.51□□□□□ -0.41
HOXB3-206ENST00000471459 ADRA2CP18825 462 aa12.51□□□□□ -0.41
HOXB3-206ENST00000471459 GNALP38405 381 aa12.51□□□□□ -0.41
HOXB3-206ENST00000471459 CDK5Q00535 292 aa12.51□□□□□ -0.41
HOXB3-206ENST00000471459 BNIP1Q12981 228 aa12.51□□□□□ -0.41
HOXB3-206ENST00000471459 ZNF154Q13106 437 aa12.51□□□□□ -0.41
HOXB3-206ENST00000471459 SNAPC1Q16533 368 aa12.51□□□□□ -0.41
HOXB3-206ENST00000471459 ZNF404Q494X3 552 aa12.51□□□□□ -0.41
HOXB3-206ENST00000471459 ARMCX4Q5H9R4 360 aa12.51□□□□□ -0.41
HOXB3-206ENST00000471459 LRRN1Q6UXK5 716 aa12.51□□□□□ -0.41
HOXB3-206ENST00000471459 C1orf229Q6ZS94 237 aaPredicted RBP12.51□□□□□ -0.41
HOXB3-206ENST00000471459 CPOQ8IVL8 374 aa12.51□□□□□ -0.41
HOXB3-206ENST00000471459 Q8TCH9 128 aa12.51□□□□□ -0.41
HOXB3-206ENST00000471459 ZMYND19Q96E35 227 aaPredicted RBP12.51□□□□□ -0.41
HOXB3-206ENST00000471459 REEP6Q96HR9 211 aa12.51□□□□□ -0.41
HOXB3-206ENST00000471459 PGAM5Q96HS1 289 aa12.51□□□□□ -0.41
HOXB3-206ENST00000471459 TMEM246Q9BRR3 403 aa12.51□□□□□ -0.41
HOXB3-206ENST00000471459 RGCCQ9H4X1 137 aa12.51□□□□□ -0.41
HOXB3-206ENST00000471459 MARCH7Q9H992 704 aa12.51□□□□□ -0.41
HOXB3-206ENST00000471459 NTN4Q9HB63 628 aa12.51□□□□□ -0.41
HOXB3-206ENST00000471459 PAPOLBQ9NRJ5 636 aaKnown RBP12.51□□□□□ -0.41
HOXB3-206ENST00000471459 H2AFY2Q9P0M6 372 aaPredicted RBP12.51□□□□□ -0.41
HOXB3-206ENST00000471459 A6NLC8 198 aa12.5□□□□□ -0.41
HOXB3-206ENST00000471459 A8MXK9 166 aa12.5□□□□□ -0.41
HOXB3-206ENST00000471459 F5H0A9 414 aaPredicted RBP12.5□□□□□ -0.41
HOXB3-206ENST00000471459 NDUFA2O43678 99 aa12.5□□□□□ -0.41
HOXB3-206ENST00000471459 FAM20BO75063 409 aa12.5□□□□□ -0.41
HOXB3-206ENST00000471459 GRPP07492 148 aa12.5□□□□□ -0.41
HOXB3-206ENST00000471459 PMELP40967 661 aa12.5□□□□□ -0.41
HOXB3-206ENST00000471459 PITPNBP48739 271 aa12.5□□□□□ -0.41
HOXB3-206ENST00000471459 OR8B8Q15620 311 aa12.5□□□□□ -0.41
HOXB3-206ENST00000471459 PRAMEF6Q5VXH4 476 aa12.5□□□□□ -0.41
HOXB3-206ENST00000471459 DCDC5Q6ZRR9 648 aa12.5□□□□□ -0.41
HOXB3-206ENST00000471459 FAM57BQ71RH2 274 aa12.5□□□□□ -0.41
HOXB3-206ENST00000471459 TIGD4Q8IY51 512 aa12.5□□□□□ -0.41
HOXB3-206ENST00000471459 HS3ST5Q8IZT8 346 aa12.5□□□□□ -0.41
HOXB3-206ENST00000471459 BOLLQ8N9W6 283 aaKnown RBP12.5□□□□□ -0.41
HOXB3-206ENST00000471459 DEFB108BQ8NET1 73 aa12.5□□□□□ -0.41
HOXB3-206ENST00000471459 CSNK2A3Q8NEV1 391 aa12.5□□□□□ -0.41
HOXB3-206ENST00000471459 OR56B2PQ8NGI1 322 aa12.5□□□□□ -0.41
HOXB3-206ENST00000471459 OTOSQ8NHW6 89 aa12.5□□□□□ -0.41
HOXB3-206ENST00000471459 SPSB4Q96A44 273 aa12.5□□□□□ -0.41
HOXB3-206ENST00000471459 SGK3Q96BR1 496 aa12.5□□□□□ -0.41
HOXB3-206ENST00000471459 CADM1Q9BY67 442 aaKnown RBP12.5□□□□□ -0.41
HOXB3-206ENST00000471459 NIPAL2Q9H841 368 aa12.5□□□□□ -0.41
HOXB3-206ENST00000471459 BRD7Q9NPI1 651 aa12.5□□□□□ -0.41
HOXB3-206ENST00000471459 MMP26Q9NRE1 261 aa12.5□□□□□ -0.41
HOXB3-206ENST00000471459 TVP23BQ9NYZ1 205 aa12.5□□□□□ -0.41
HOXB3-206ENST00000471459 DNAJC27Q9NZQ0 273 aa12.5□□□□□ -0.41
HOXB3-206ENST00000471459 CLN8Q9UBY8 286 aa12.5□□□□□ -0.41
HOXB3-206ENST00000471459 LAMP5Q9UJQ1 280 aa12.5□□□□□ -0.41
HOXB3-206ENST00000471459 INSIG2Q9Y5U4 225 aa12.5□□□□□ -0.41
HOXB3-206ENST00000471459 DYSFO75923 2080 aa12.5□□□□□ -0.41
HOXB3-206ENST00000471459 TRAV38-1A0A0B4J264 116 aa12.49□□□□□ -0.41
HOXB3-206ENST00000471459 hCG_1807616A0A1W2PRN6 198 aa12.49□□□□□ -0.41
HOXB3-206ENST00000471459 TRAPPC2LH3BP13 241 aa12.49□□□□□ -0.41
HOXB3-206ENST00000471459 TIPRLO75663 272 aa12.49□□□□□ -0.41
HOXB3-206ENST00000471459 VENTXO95231 258 aa12.49□□□□□ -0.41
HOXB3-206ENST00000471459 ZNF12P17014 697 aa12.49□□□□□ -0.41
HOXB3-206ENST00000471459 FASP25445 335 aa12.49□□□□□ -0.41
HOXB3-206ENST00000471459 OPRL1P41146 370 aa12.49□□□□□ -0.41
HOXB3-206ENST00000471459 CRISP1P54107 249 aa12.49□□□□□ -0.41
HOXB3-206ENST00000471459 ZNF121P58317 390 aaPredicted RBP12.49□□□□□ -0.41
HOXB3-206ENST00000471459 ESRRGP62508 458 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms