RNA–Protein interactions for RNA: ENST00000471423.1

VPS72-204, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 2

Gene VPS72, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-204ENST00000471423 CHODLQ9H9P2 273 aa15.05■□□□□ -0
VPS72-204ENST00000471423 MRM2Q9UI43 246 aaKnown RBP15.05■□□□□ -0
VPS72-204ENST00000471423 IGHV1-69-2A0A0G2JMI3 117 aa15.04■□□□□ -0
VPS72-204ENST00000471423 TMEM269A0A1B0GVZ9 245 aa15.04■□□□□ -0
VPS72-204ENST00000471423 H0YL77 283 aa15.04■□□□□ -0
VPS72-204ENST00000471423 MLNRO43193 412 aa15.04■□□□□ -0
VPS72-204ENST00000471423 DBTP11182 482 aaKnown RBP15.04■□□□□ -0
VPS72-204ENST00000471423 TNFSF4P23510 183 aa15.04■□□□□ -0
VPS72-204ENST00000471423 GIFP27352 417 aa15.04■□□□□ -0
VPS72-204ENST00000471423 DCTDP32321 178 aa15.04■□□□□ -0
VPS72-204ENST00000471423 NR4A2P43354 598 aa15.04■□□□□ -0
VPS72-204ENST00000471423 MRPS11P82912 194 aaKnown RBP15.04■□□□□ -0
VPS72-204ENST00000471423 MFGE8Q08431 387 aaPredicted RBP15.04■□□□□ -0
VPS72-204ENST00000471423 RIN1Q13671 783 aa15.04■□□□□ -0
VPS72-204ENST00000471423 ZNF829Q3KNS6 432 aaPredicted RBP15.04■□□□□ -0
VPS72-204ENST00000471423 OR56B2PQ8NGI1 322 aa15.04■□□□□ -0
VPS72-204ENST00000471423 OR13G1Q8NGZ3 307 aa15.04■□□□□ -0
VPS72-204ENST00000471423 SMR3AQ99954 134 aa15.04■□□□□ -0
VPS72-204ENST00000471423 EGLN1Q9GZT9 426 aa15.04■□□□□ -0
VPS72-204ENST00000471423 AMBNQ9NP70 447 aa15.04■□□□□ -0
VPS72-204ENST00000471423 ZNF275Q9NSD4 429 aaPredicted RBP15.04■□□□□ -0
VPS72-204ENST00000471423 CACNG2Q9Y698 323 aa15.04■□□□□ -0
VPS72-204ENST00000471423 hCG_38984A0A1B0GV85 526 aa15.03■□□□□ -0
VPS72-204ENST00000471423 WBP4O75554 376 aaKnown RBP15.03■□□□□ -0
VPS72-204ENST00000471423 HLA-DPB1P04440 258 aa15.03■□□□□ -0
VPS72-204ENST00000471423 KRT8P05787 483 aa15.03■□□□□ -0
VPS72-204ENST00000471423 CAPGP40121 348 aa15.03■□□□□ -0
VPS72-204ENST00000471423 CRYBB2P43320 205 aa15.03■□□□□ -0
VPS72-204ENST00000471423 FAM3AP98173 230 aa15.03■□□□□ -0
VPS72-204ENST00000471423 CNIH3Q8TBE1 160 aa15.03■□□□□ -0
VPS72-204ENST00000471423 LGALS12Q96DT0 336 aa15.03■□□□□ -0
VPS72-204ENST00000471423 OR2V2Q96R30 315 aa15.03■□□□□ -0
VPS72-204ENST00000471423 RGCCQ9H4X1 137 aa15.03■□□□□ -0
VPS72-204ENST00000471423 TMEM100Q9NV29 134 aa15.03■□□□□ -0
VPS72-204ENST00000471423 TREM2Q9NZC2 230 aa15.03■□□□□ -0
VPS72-204ENST00000471423 IL19Q9UHD0 177 aa15.03■□□□□ -0
VPS72-204ENST00000471423 GTF2A1LQ9UNN4 478 aa15.03■□□□□ -0
VPS72-204ENST00000471423 CR1P17927 2039 aa15.03■□□□□ -0
VPS72-204ENST00000471423 A0A1B0GWJ7 208 aa15.02■□□□□ -0
VPS72-204ENST00000471423 J3QRE1 110 aa15.02■□□□□ -0
VPS72-204ENST00000471423 SRSF10O75494 262 aaKnown RBP15.02■□□□□ -0
VPS72-204ENST00000471423 PNPP00491 289 aa15.02■□□□□ -0
VPS72-204ENST00000471423 GNAO1P09471 354 aa15.02■□□□□ -0
VPS72-204ENST00000471423 CA6P23280 308 aa15.02■□□□□ -0
VPS72-204ENST00000471423 CFL1P23528 166 aaKnown RBP15.02■□□□□ -0
VPS72-204ENST00000471423 GSK3AP49840 483 aa15.02■□□□□ -0
VPS72-204ENST00000471423 MMP16P51512 607 aa15.02■□□□□ -0
VPS72-204ENST00000471423 ACTC1P68032 377 aa15.02■□□□□ -0
VPS72-204ENST00000471423 ACTA1P68133 377 aa15.02■□□□□ -0
VPS72-204ENST00000471423 ZNF85Q03923 595 aa15.02■□□□□ -0
VPS72-204ENST00000471423 HNRNPA0Q13151 305 aaKnown RBP15.02■□□□□ -0
VPS72-204ENST00000471423 SMN1Q16637 294 aaKnown RBP15.02■□□□□ -0
VPS72-204ENST00000471423 ZNF684Q5T5D7 378 aa15.02■□□□□ -0
VPS72-204ENST00000471423 YIPF7Q8N8F6 280 aa15.02■□□□□ -0
VPS72-204ENST00000471423 ZNF540Q8NDQ6 660 aa15.02■□□□□ -0
VPS72-204ENST00000471423 SETD9Q8NE22 299 aa15.02■□□□□ -0
VPS72-204ENST00000471423 ITLN1Q8WWA0 313 aa15.02■□□□□ -0
VPS72-204ENST00000471423 DVL3Q92997 716 aaPredicted RBP15.02■□□□□ -0
VPS72-204ENST00000471423 LYZL4Q96KX0 146 aa15.02■□□□□ -0
VPS72-204ENST00000471423 PBOV1Q9GZY1 135 aa15.02■□□□□ -0
VPS72-204ENST00000471423 NUFIP1Q9UHK0 495 aaKnown RBP15.02■□□□□ -0
VPS72-204ENST00000471423 EXOGQ9Y2C4 368 aaKnown RBP15.02■□□□□ -0
VPS72-204ENST00000471423 R4GMQ9 66 aa15.02■□□□□ -0
VPS72-204ENST00000471423 IGHV4-61A0A0C4DH41 118 aa15.01□□□□□ -0.01
VPS72-204ENST00000471423 DAPL1A0PJW8 107 aa15.01□□□□□ -0.01
VPS72-204ENST00000471423 METTL15A6NJ78 407 aa15.01□□□□□ -0.01
VPS72-204ENST00000471423 ACOD1A6NK06 481 aa15.01□□□□□ -0.01
VPS72-204ENST00000471423 F5H5P2 479 aa15.01□□□□□ -0.01
VPS72-204ENST00000471423 LOC110117498-PIK3R3F6TDL0 507 aa15.01□□□□□ -0.01
VPS72-204ENST00000471423 RPP14O95059 124 aaKnown RBP15.01□□□□□ -0.01
VPS72-204ENST00000471423 USF1P22415 310 aaPredicted RBP15.01□□□□□ -0.01
VPS72-204ENST00000471423 GPR6P46095 362 aaPredicted RBP15.01□□□□□ -0.01
VPS72-204ENST00000471423 LOXL1Q08397 574 aaPredicted RBP15.01□□□□□ -0.01
VPS72-204ENST00000471423 HFEQ30201 348 aa15.01□□□□□ -0.01
VPS72-204ENST00000471423 BIVMQ86UB2 503 aa15.01□□□□□ -0.01
VPS72-204ENST00000471423 CCL17Q92583 94 aa15.01□□□□□ -0.01
VPS72-204ENST00000471423 PPP1R14AQ96A00 147 aa15.01□□□□□ -0.01
VPS72-204ENST00000471423 MEGF10Q96KG7 1140 aa15.01□□□□□ -0.01
VPS72-204ENST00000471423 SOX7Q9BT81 388 aa15.01□□□□□ -0.01
VPS72-204ENST00000471423 ADAT1Q9BUB4 502 aaKnown RBP15.01□□□□□ -0.01
VPS72-204ENST00000471423 GSX1Q9H4S2 264 aaPredicted RBP15.01□□□□□ -0.01
VPS72-204ENST00000471423 MOB1AQ9H8S9 216 aa15.01□□□□□ -0.01
VPS72-204ENST00000471423 MRPL15Q9P015 296 aaKnown RBP15.01□□□□□ -0.01
VPS72-204ENST00000471423 RPL36Q9Y3U8 105 aaKnown RBP15.01□□□□□ -0.01
VPS72-204ENST00000471423 TANC2Q9HCD6 1990 aa15□□□□□ -0.01
VPS72-204ENST00000471423 IGHV3-64DA0A0J9YX35 117 aa15□□□□□ -0.01
VPS72-204ENST00000471423 A0A0U1RQV5 110 aa15□□□□□ -0.01
VPS72-204ENST00000471423 H0YAE9 185 aa15□□□□□ -0.01
VPS72-204ENST00000471423 PPIHO43447 177 aaKnown RBP15□□□□□ -0.01
VPS72-204ENST00000471423 SULT1C4O75897 302 aa15□□□□□ -0.01
VPS72-204ENST00000471423 TNFRSF1AP19438 455 aa15□□□□□ -0.01
VPS72-204ENST00000471423 RBMXP38159 391 aaKnown RBP15□□□□□ -0.01
VPS72-204ENST00000471423 DDOSTP39656 456 aa15□□□□□ -0.01
VPS72-204ENST00000471423 SRP9P49458 86 aaKnown RBP15□□□□□ -0.01
VPS72-204ENST00000471423 AQP4P55087 323 aa15□□□□□ -0.01
VPS72-204ENST00000471423 ISL1P61371 349 aa15□□□□□ -0.01
VPS72-204ENST00000471423 IL18R1Q13478 541 aa15□□□□□ -0.01
VPS72-204ENST00000471423 OR8G1Q15617 311 aa15□□□□□ -0.01
VPS72-204ENST00000471423 OR8B8Q15620 311 aa15□□□□□ -0.01
VPS72-204ENST00000471423 TP53I3Q53FA7 332 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms