RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 C6orf201Q7Z4U5 140 aa6.28□□□□□ -1.4
BRCA1-210ENST00000471181 OR2L13Q8N349 312 aa6.28□□□□□ -1.4
BRCA1-210ENST00000471181 OR1L1Q8NH94 360 aa6.28□□□□□ -1.4
BRCA1-210ENST00000471181 DYNLRB2Q8TF09 96 aa6.28□□□□□ -1.4
BRCA1-210ENST00000471181 ZNF480Q8WV37 535 aa6.28□□□□□ -1.4
BRCA1-210ENST00000471181 NAA50Q9GZZ1 169 aaKnown RBP6.28□□□□□ -1.4
BRCA1-210ENST00000471181 NDRG4Q9ULP0 352 aaKnown RBP6.28□□□□□ -1.4
BRCA1-210ENST00000471181 TRGV10A0A0A0MS01 117 aa6.27□□□□□ -1.4
BRCA1-210ENST00000471181 CRYAAP02489 173 aa6.27□□□□□ -1.4
BRCA1-210ENST00000471181 SFTA3P0C7M3 94 aa6.27□□□□□ -1.4
BRCA1-210ENST00000471181 CD37P11049 281 aa6.27□□□□□ -1.4
BRCA1-210ENST00000471181 SNRPGP62308 76 aaKnown RBP6.27□□□□□ -1.4
BRCA1-210ENST00000471181 PITX1P78337 314 aaPredicted RBP6.27□□□□□ -1.4
BRCA1-210ENST00000471181 DHODHQ02127 395 aa6.27□□□□□ -1.4
BRCA1-210ENST00000471181 RING1Q06587 406 aa6.27□□□□□ -1.4
BRCA1-210ENST00000471181 SEMA3BQ13214 749 aa6.27□□□□□ -1.4
BRCA1-210ENST00000471181 TTC32Q5I0X7 151 aa6.27□□□□□ -1.4
BRCA1-210ENST00000471181 ABI3BPQ7Z7G0 1075 aa6.27□□□□□ -1.4
BRCA1-210ENST00000471181 ISCA2Q86U28 154 aa6.27□□□□□ -1.4
BRCA1-210ENST00000471181 FBXL14Q8N1E6 418 aa6.27□□□□□ -1.4
BRCA1-210ENST00000471181 ANKRD53Q8N9V6 530 aa6.27□□□□□ -1.4
BRCA1-210ENST00000471181 OR52I1Q8NGK6 324 aa6.27□□□□□ -1.4
BRCA1-210ENST00000471181 OR1B1Q8NGR6 318 aa6.27□□□□□ -1.4
BRCA1-210ENST00000471181 WBP2Q969T9 261 aa6.27□□□□□ -1.4
BRCA1-210ENST00000471181 CXorf58Q96LI9 332 aa6.27□□□□□ -1.4
BRCA1-210ENST00000471181 OR5M11Q96RB7 305 aa6.27□□□□□ -1.4
BRCA1-210ENST00000471181 TAAR9Q96RI9 348 aa6.27□□□□□ -1.4
BRCA1-210ENST00000471181 SLC25A21Q9BQT8 299 aaPredicted RBP6.27□□□□□ -1.4
BRCA1-210ENST00000471181 ADAT1Q9BUB4 502 aaKnown RBP6.27□□□□□ -1.4
BRCA1-210ENST00000471181 EMC6Q9BV81 110 aa6.27□□□□□ -1.4
BRCA1-210ENST00000471181 MAP1LC3CQ9BXW4 147 aa6.27□□□□□ -1.4
BRCA1-210ENST00000471181 ADGRL4Q9HBW9 690 aa6.27□□□□□ -1.4
BRCA1-210ENST00000471181 SLC7A10Q9NS82 523 aa6.27□□□□□ -1.4
BRCA1-210ENST00000471181 NDUFB11Q9NX14 153 aa6.27□□□□□ -1.4
BRCA1-210ENST00000471181 NWD2Q9ULI1 1742 aa6.27□□□□□ -1.4
BRCA1-210ENST00000471181 IGHV3-15A0A0B4J1V0 119 aa6.27□□□□□ -1.41
BRCA1-210ENST00000471181 A6NDN8 102 aa6.27□□□□□ -1.41
BRCA1-210ENST00000471181 B4GALT3O60512 393 aa6.27□□□□□ -1.41
BRCA1-210ENST00000471181 SP1P08047 785 aa6.27□□□□□ -1.41
BRCA1-210ENST00000471181 GSCP56915 257 aaPredicted RBP6.27□□□□□ -1.41
BRCA1-210ENST00000471181 TRMT12Q53H54 448 aaKnown RBP6.27□□□□□ -1.41
BRCA1-210ENST00000471181 C1orf140Q5VVS0 124 aa6.27□□□□□ -1.41
BRCA1-210ENST00000471181 ZNF343Q6P1L6 599 aa6.27□□□□□ -1.41
BRCA1-210ENST00000471181 CXorf67Q86X51 503 aaPredicted RBP6.27□□□□□ -1.41
BRCA1-210ENST00000471181 FBXO27Q8NI29 283 aa6.27□□□□□ -1.41
BRCA1-210ENST00000471181 SRD5A3Q9H8P0 318 aa6.27□□□□□ -1.41
BRCA1-210ENST00000471181 TIMM10BQ9Y5J6 103 aa6.27□□□□□ -1.41
BRCA1-210ENST00000471181 A0A1W2PRD5 423 aa6.27□□□□□ -1.41
BRCA1-210ENST00000471181 A0A1W2PRF3 423 aa6.27□□□□□ -1.41
BRCA1-210ENST00000471181 A0A1W2PRM7 423 aa6.27□□□□□ -1.41
BRCA1-210ENST00000471181 CLDN24A6NM45 220 aa6.27□□□□□ -1.41
BRCA1-210ENST00000471181 DEFB108AA8MXU0 73 aa6.27□□□□□ -1.41
BRCA1-210ENST00000471181 SCG5P05408 212 aa6.27□□□□□ -1.41
BRCA1-210ENST00000471181 OR2F1Q13607 317 aa6.27□□□□□ -1.41
BRCA1-210ENST00000471181 HLXQ14774 488 aaPredicted RBP6.27□□□□□ -1.41
BRCA1-210ENST00000471181 XKR7Q5GH72 579 aa6.27□□□□□ -1.41
BRCA1-210ENST00000471181 FAAP20Q6NZ36 180 aa6.27□□□□□ -1.41
BRCA1-210ENST00000471181 CORO6Q6QEF8 472 aa6.27□□□□□ -1.41
BRCA1-210ENST00000471181 PET117Q6UWS5 81 aa6.27□□□□□ -1.41
BRCA1-210ENST00000471181 C6orf15Q6UXA7 325 aaPredicted RBP6.27□□□□□ -1.41
BRCA1-210ENST00000471181 DLK2Q6UY11 383 aa6.27□□□□□ -1.41
BRCA1-210ENST00000471181 CBLL1Q75N03 491 aa6.27□□□□□ -1.41
BRCA1-210ENST00000471181 CLDN22Q8N7P3 220 aa6.27□□□□□ -1.41
BRCA1-210ENST00000471181 SGK494Q96LW2 274 aa6.27□□□□□ -1.41
BRCA1-210ENST00000471181 LINC00052Q96N35 136 aa6.27□□□□□ -1.41
BRCA1-210ENST00000471181 OPALINQ96PE5 141 aa6.27□□□□□ -1.41
BRCA1-210ENST00000471181 OR2A14Q96R47 310 aa6.27□□□□□ -1.41
BRCA1-210ENST00000471181 NAA60Q9H7X0 242 aa6.27□□□□□ -1.41
BRCA1-210ENST00000471181 COA4Q9NYJ1 87 aa6.27□□□□□ -1.41
BRCA1-210ENST00000471181 MOB4Q9Y3A3 225 aa6.27□□□□□ -1.41
BRCA1-210ENST00000471181 Q9Y3F1 56 aa6.27□□□□□ -1.41
BRCA1-210ENST00000471181 SOX21Q9Y651 276 aaPredicted RBP6.27□□□□□ -1.41
BRCA1-210ENST00000471181 RREB1Q92766 1687 aa6.27□□□□□ -1.41
BRCA1-210ENST00000471181 ZC3H12DA2A288 527 aaKnown RBP6.27□□□□□ -1.41
BRCA1-210ENST00000471181 PPIHO43447 177 aaKnown RBP6.27□□□□□ -1.41
BRCA1-210ENST00000471181 NRASP01111 189 aa6.27□□□□□ -1.41
BRCA1-210ENST00000471181 CST2P09228 141 aa6.27□□□□□ -1.41
BRCA1-210ENST00000471181 COX7A1P24310 79 aa6.27□□□□□ -1.41
BRCA1-210ENST00000471181 CCR9P51686 369 aa6.27□□□□□ -1.41
BRCA1-210ENST00000471181 RACK1P63244 317 aaKnown RBP6.27□□□□□ -1.41
BRCA1-210ENST00000471181 SPATA46Q5T0L3 261 aa6.27□□□□□ -1.41
BRCA1-210ENST00000471181 ZFPM2Q8WW38 1151 aa6.27□□□□□ -1.41
BRCA1-210ENST00000471181 MBD3L1Q8WWY6 194 aa6.27□□□□□ -1.41
BRCA1-210ENST00000471181 RPEQ96AT9 228 aa6.27□□□□□ -1.41
BRCA1-210ENST00000471181 DPH3P1Q9H4G8 78 aa6.27□□□□□ -1.41
BRCA1-210ENST00000471181 LOC107986453A0A1B0GWG9 222 aa6.27□□□□□ -1.41
BRCA1-210ENST00000471181 PLAUP00749 431 aa6.27□□□□□ -1.41
BRCA1-210ENST00000471181 T-ENOLP0DO92 83 aa6.27□□□□□ -1.41
BRCA1-210ENST00000471181 SLC19A1P41440 591 aa6.27□□□□□ -1.41
BRCA1-210ENST00000471181 HAAOP46952 286 aa6.27□□□□□ -1.41
BRCA1-210ENST00000471181 ZDHHC23Q8IYP9 409 aa6.27□□□□□ -1.41
BRCA1-210ENST00000471181 TMEM251Q8N6I4 163 aa6.27□□□□□ -1.41
BRCA1-210ENST00000471181 SLC26A10Q8NG04 563 aa6.27□□□□□ -1.41
BRCA1-210ENST00000471181 RHOXF1Q8NHV9 184 aa6.27□□□□□ -1.41
BRCA1-210ENST00000471181 SPACA5Q96QH8 159 aa6.27□□□□□ -1.41
BRCA1-210ENST00000471181 PCOLCE2Q9UKZ9 415 aa6.27□□□□□ -1.41
BRCA1-210ENST00000471181 SLC5A6Q9Y289 635 aa6.27□□□□□ -1.41
BRCA1-210ENST00000471181 UBR2Q8IWV8 1755 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 FAM157AC9JC47 383 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 GFRA2O00451 464 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms