RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 FGF16O43320 207 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 SLC37A4O43826 429 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 SLC25A12O75746 678 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 MPZL1O95297 269 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 FARS2O95363 451 aaKnown RBP4.54□□□□□ -1.68
COL3A1-205ENST00000470167 SIX6O95475 246 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 PRKCGP05129 697 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 SOD3P08294 240 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 GIPP09681 153 aaPredicted RBP4.54□□□□□ -1.68
COL3A1-205ENST00000470167 OR4Q2P0C623 313 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 OR5G3P0C626 314 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 FAM90A15PP0C7V4 464 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 FAM90A14PP0C7W9 464 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 ACP2P11117 423 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 PSG2P11465 335 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 UNGP13051 313 aaPredicted RBP4.54□□□□□ -1.68
COL3A1-205ENST00000470167 ARSAP15289 507 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 B4GALT1P15291 398 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 HIST1H1CP16403 213 aaKnown RBP4.54□□□□□ -1.68
COL3A1-205ENST00000470167 ZNF19P17023 458 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 CXCL2P19875 107 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 PSMA1P25786 263 aaKnown RBP4.54□□□□□ -1.68
COL3A1-205ENST00000470167 IMPA1P29218 277 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 HTR1FP30939 366 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 ARRB2P32121 409 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 DNASE1L1P49184 302 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 PRLHRP49683 370 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 FOXG1P55316 489 aaPredicted RBP4.54□□□□□ -1.68
COL3A1-205ENST00000470167 UBE2KP61086 200 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 EIF2B1Q14232 305 aaKnown RBP4.54□□□□□ -1.68
COL3A1-205ENST00000470167 GNMTQ14749 295 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 P2RY6Q15077 328 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 MRPL23Q16540 153 aaKnown RBP4.54□□□□□ -1.68
COL3A1-205ENST00000470167 ELFN2Q5R3F8 820 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 TMEM78Q5T7P6 136 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 GGNBP1Q5YKI7 109 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 ZNF660Q6AZW8 331 aaPredicted RBP4.54□□□□□ -1.68
COL3A1-205ENST00000470167 TEX38Q6PEX7 206 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 SHC4Q6S5L8 630 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 ALKAL2Q6UX46 152 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 SIGLEC15Q6ZMC9 328 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 IL34Q6ZMJ4 242 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 HIST2H3AQ71DI3 136 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 RNF44Q7L0R7 432 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 FA2HQ7L5A8 372 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 LRRTM1Q86UE6 522 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 IFNEQ86WN2 208 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 TMEM217Q8N7C4 229 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 SLC35G3Q8N808 338 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 DCBLD1Q8N8Z6 715 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 HJURPQ8NCD3 748 aaPredicted RBP4.54□□□□□ -1.68
COL3A1-205ENST00000470167 FAM110BQ8TC76 370 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 APOBEC3DQ96AK3 386 aaPredicted RBP4.54□□□□□ -1.68
COL3A1-205ENST00000470167 MOB3AQ96BX8 217 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 CENPNQ96H22 339 aaPredicted RBP4.54□□□□□ -1.68
COL3A1-205ENST00000470167 SIGLEC12Q96PQ1 595 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 CLCC1Q96S66 551 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 P2RX4Q99571 388 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 MGLLQ99685 303 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 MRPL57Q9BQC6 102 aaKnown RBP4.54□□□□□ -1.68
COL3A1-205ENST00000470167 LAT2Q9GZY6 243 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 SPATC1LQ9H0A9 340 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 SLC25A31Q9H0C2 315 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 ECHDC1Q9NTX5 307 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 ASB6Q9NWX5 421 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 MRPL16Q9NX20 251 aaKnown RBP4.54□□□□□ -1.68
COL3A1-205ENST00000470167 ARL15Q9NXU5 204 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 CLN8Q9UBY8 286 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 HSPB8Q9UJY1 196 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 PLA2G2DQ9UNK4 145 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 FOXJ3Q9UPW0 622 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 FOXA2Q9Y261 457 aaPredicted RBP4.54□□□□□ -1.68
COL3A1-205ENST00000470167 SNX10Q9Y5X0 201 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 PPLO60437 1756 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 ADAMTS13Q76LX8 1427 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 TANC1Q9C0D5 1861 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 FER1L4A9Z1Z3 1794 aa4.53□□□□□ -1.68
COL3A1-205ENST00000470167 ABCC1P33527 1531 aa4.53□□□□□ -1.68
COL3A1-205ENST00000470167 ARHGAP5Q13017 1502 aa4.53□□□□□ -1.68
COL3A1-205ENST00000470167 MYH8P13535 1937 aa4.53□□□□□ -1.68
COL3A1-205ENST00000470167 MTCL1Q9Y4B5 1905 aaKnown RBP4.53□□□□□ -1.68
COL3A1-205ENST00000470167 TRAV38-1A0A0B4J264 116 aa4.53□□□□□ -1.68
COL3A1-205ENST00000470167 MANSC4A6NHS7 340 aaPredicted RBP4.53□□□□□ -1.68
COL3A1-205ENST00000470167 DHRS7CA6NNS2 312 aa4.53□□□□□ -1.68
COL3A1-205ENST00000470167 FTCDNL1E5RQL4 147 aa4.53□□□□□ -1.68
COL3A1-205ENST00000470167 F5H5T6 163 aa4.53□□□□□ -1.68
COL3A1-205ENST00000470167 LYRM1O43325 122 aa4.53□□□□□ -1.68
COL3A1-205ENST00000470167 SYT7O43581 403 aa4.53□□□□□ -1.68
COL3A1-205ENST00000470167 RAMP2O60895 175 aa4.53□□□□□ -1.68
COL3A1-205ENST00000470167 TNFSF13O75888 250 aa4.53□□□□□ -1.68
COL3A1-205ENST00000470167 CER1O95813 267 aa4.53□□□□□ -1.68
COL3A1-205ENST00000470167 HBZP02008 142 aa4.53□□□□□ -1.68
COL3A1-205ENST00000470167 CD14P08571 375 aa4.53□□□□□ -1.68
COL3A1-205ENST00000470167 TMEM225BP0DP42 221 aa4.53□□□□□ -1.68
COL3A1-205ENST00000470167 ZNF17P17021 662 aa4.53□□□□□ -1.68
COL3A1-205ENST00000470167 ALOX5APP20292 161 aa4.53□□□□□ -1.68
COL3A1-205ENST00000470167 PMCHP20382 165 aa4.53□□□□□ -1.68
COL3A1-205ENST00000470167 TGFBR1P36897 503 aa4.53□□□□□ -1.68
COL3A1-205ENST00000470167 METAP2P50579 478 aaKnown RBP eCLIP4.53□□□□□ -1.68
COL3A1-205ENST00000470167 NDUFA6P56556 154 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms