RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 HIST2H3PS2Q5TEC6 136 aa15.48■□□□□ 0.07
NCKIPSD-209ENST00000470006 TEX36Q5VZQ5 186 aa15.48■□□□□ 0.07
NCKIPSD-209ENST00000470006 NCR3LG1Q68D85 454 aa15.48■□□□□ 0.07
NCKIPSD-209ENST00000470006 WDR93Q6P2C0 686 aa15.48■□□□□ 0.07
NCKIPSD-209ENST00000470006 PGBD2Q6P3X8 592 aa15.48■□□□□ 0.07
NCKIPSD-209ENST00000470006 PGM2L1Q6PCE3 622 aa15.48■□□□□ 0.07
NCKIPSD-209ENST00000470006 HIST2H3AQ71DI3 136 aa15.48■□□□□ 0.07
NCKIPSD-209ENST00000470006 RRM2BQ7LG56 351 aa15.48■□□□□ 0.07
NCKIPSD-209ENST00000470006 FAM122BQ7Z309 247 aa15.48■□□□□ 0.07
NCKIPSD-209ENST00000470006 NDUFA11Q86Y39 141 aa15.48■□□□□ 0.07
NCKIPSD-209ENST00000470006 LINC00346Q8IVM7 164 aa15.48■□□□□ 0.07
NCKIPSD-209ENST00000470006 FAM216BQ8N7L0 139 aa15.48■□□□□ 0.07
NCKIPSD-209ENST00000470006 Q8N7P7 452 aa15.48■□□□□ 0.07
NCKIPSD-209ENST00000470006 SLC7A13Q8TCU3 470 aa15.48■□□□□ 0.07
NCKIPSD-209ENST00000470006 ATF6BQ99941 703 aa15.48■□□□□ 0.07
NCKIPSD-209ENST00000470006 CDC42EP2O14613 210 aa15.47■□□□□ 0.07
NCKIPSD-209ENST00000470006 PTBP3O95758 552 aaKnown RBP15.47■□□□□ 0.07
NCKIPSD-209ENST00000470006 SDHAP31040 664 aa15.47■□□□□ 0.07
NCKIPSD-209ENST00000470006 GZMMP51124 257 aa15.47■□□□□ 0.07
NCKIPSD-209ENST00000470006 TPTEP56180 551 aa15.47■□□□□ 0.07
NCKIPSD-209ENST00000470006 MAGOHP61326 146 aaKnown RBP15.47■□□□□ 0.07
NCKIPSD-209ENST00000470006 ACSM1Q08AH1 577 aa15.47■□□□□ 0.07
NCKIPSD-209ENST00000470006 TRAP1Q12931 704 aaKnown RBP15.47■□□□□ 0.07
NCKIPSD-209ENST00000470006 LRRC10Q5BKY1 277 aa15.47■□□□□ 0.07
NCKIPSD-209ENST00000470006 GPR139Q6DWJ6 353 aa15.47■□□□□ 0.07
NCKIPSD-209ENST00000470006 DNM1P34Q6PK57 102 aa15.47■□□□□ 0.07
NCKIPSD-209ENST00000470006 TBPL2Q6SJ96 375 aa15.47■□□□□ 0.07
NCKIPSD-209ENST00000470006 CFAP77Q6ZQR2 320 aa15.47■□□□□ 0.07
NCKIPSD-209ENST00000470006 OR2AJ1Q8NGZ0 328 aa15.47■□□□□ 0.07
NCKIPSD-209ENST00000470006 LRRC29Q8WV35 223 aa15.47■□□□□ 0.07
NCKIPSD-209ENST00000470006 C7orf26Q96N11 449 aa15.47■□□□□ 0.07
NCKIPSD-209ENST00000470006 TSSK2Q96PF2 358 aa15.47■□□□□ 0.07
NCKIPSD-209ENST00000470006 C14orf119Q9NWQ9 140 aa15.47■□□□□ 0.07
NCKIPSD-209ENST00000470006 VSX1Q9NZR4 365 aaPredicted RBP15.47■□□□□ 0.07
NCKIPSD-209ENST00000470006 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.47■□□□□ 0.07
NCKIPSD-209ENST00000470006 PRPF19Q9UMS4 504 aaKnown RBP15.47■□□□□ 0.07
NCKIPSD-209ENST00000470006 V9GYY5 206 aaPredicted RBP15.47■□□□□ 0.07
NCKIPSD-209ENST00000470006 LOC100653049A0A140TA62 436 aa15.46■□□□□ 0.07
NCKIPSD-209ENST00000470006 A0A1W2PQ09 198 aa15.46■□□□□ 0.07
NCKIPSD-209ENST00000470006 KRT34O76011 436 aa15.46■□□□□ 0.07
NCKIPSD-209ENST00000470006 LHBP01229 141 aa15.46■□□□□ 0.07
NCKIPSD-209ENST00000470006 MUC1P15941 1255 aaPredicted RBP15.46■□□□□ 0.07
NCKIPSD-209ENST00000470006 POU1F1P28069 291 aa15.46■□□□□ 0.07
NCKIPSD-209ENST00000470006 GRK5P34947 590 aa15.46■□□□□ 0.07
NCKIPSD-209ENST00000470006 MDH1P40925 334 aaKnown RBP15.46■□□□□ 0.07
NCKIPSD-209ENST00000470006 BLMHQ13867 455 aa15.46■□□□□ 0.07
NCKIPSD-209ENST00000470006 CYLC2Q14093 348 aaPredicted RBP15.46■□□□□ 0.07
NCKIPSD-209ENST00000470006 PCK2Q16822 640 aa15.46■□□□□ 0.07
NCKIPSD-209ENST00000470006 LRRC75BQ2VPJ9 315 aa15.46■□□□□ 0.07
NCKIPSD-209ENST00000470006 NANOGP8Q6NSW7 305 aa15.46■□□□□ 0.07
NCKIPSD-209ENST00000470006 RNF113BQ8IZP6 322 aaKnown RBP15.46■□□□□ 0.07
NCKIPSD-209ENST00000470006 OR8S1Q8NH09 359 aa15.46■□□□□ 0.07
NCKIPSD-209ENST00000470006 C17orf50Q8WW18 174 aa15.46■□□□□ 0.07
NCKIPSD-209ENST00000470006 DMRTB1Q96MA1 342 aa15.46■□□□□ 0.07
NCKIPSD-209ENST00000470006 CITED2Q99967 270 aaPredicted RBP15.46■□□□□ 0.07
NCKIPSD-209ENST00000470006 DCTN5Q9BTE1 182 aa15.46■□□□□ 0.07
NCKIPSD-209ENST00000470006 SRA1Q9HD15 236 aaKnown RBP15.46■□□□□ 0.07
NCKIPSD-209ENST00000470006 IER3IP1Q9Y5U9 82 aa15.46■□□□□ 0.07
NCKIPSD-209ENST00000470006 CAPN7Q9Y6W3 813 aa15.46■□□□□ 0.07
NCKIPSD-209ENST00000470006 J3KTA2 159 aa15.45■□□□□ 0.06
NCKIPSD-209ENST00000470006 BHLHE40O14503 412 aa15.45■□□□□ 0.06
NCKIPSD-209ENST00000470006 NDUFB2O95178 105 aa15.45■□□□□ 0.06
NCKIPSD-209ENST00000470006 ZNF26P17031 533 aaPredicted RBP15.45■□□□□ 0.06
NCKIPSD-209ENST00000470006 CRABP1P29762 137 aa15.45■□□□□ 0.06
NCKIPSD-209ENST00000470006 GMFBP60983 142 aa15.45■□□□□ 0.06
NCKIPSD-209ENST00000470006 ZNF92Q03936 586 aa15.45■□□□□ 0.06
NCKIPSD-209ENST00000470006 RABL3Q5HYI8 236 aa15.45■□□□□ 0.06
NCKIPSD-209ENST00000470006 PTCHD4Q6ZW05 846 aa15.45■□□□□ 0.06
NCKIPSD-209ENST00000470006 MBOAT2Q6ZWT7 520 aa15.45■□□□□ 0.06
NCKIPSD-209ENST00000470006 TSEN54Q7Z6J9 526 aaKnown RBP15.45■□□□□ 0.06
NCKIPSD-209ENST00000470006 ADCK1Q86TW2 530 aa15.45■□□□□ 0.06
NCKIPSD-209ENST00000470006 FAM156AQ8NDB6 213 aa15.45■□□□□ 0.06
NCKIPSD-209ENST00000470006 OR2AE1Q8NHA4 323 aa15.45■□□□□ 0.06
NCKIPSD-209ENST00000470006 TNFRSF14Q92956 283 aa15.45■□□□□ 0.06
NCKIPSD-209ENST00000470006 SH3GL1Q99961 368 aa15.45■□□□□ 0.06
NCKIPSD-209ENST00000470006 OCSTAMPQ9BR26 566 aa15.45■□□□□ 0.06
NCKIPSD-209ENST00000470006 NSRP1Q9H0G5 558 aaKnown RBP15.45■□□□□ 0.06
NCKIPSD-209ENST00000470006 METTL8Q9H825 291 aaKnown RBP15.45■□□□□ 0.06
NCKIPSD-209ENST00000470006 MRPL15Q9P015 296 aaKnown RBP15.45■□□□□ 0.06
NCKIPSD-209ENST00000470006 SF3B6Q9Y3B4 125 aaKnown RBP15.45■□□□□ 0.06
NCKIPSD-209ENST00000470006 N6AMT1Q9Y5N5 214 aa15.45■□□□□ 0.06
NCKIPSD-209ENST00000470006 A0A1W2PRX2 142 aa15.44■□□□□ 0.06
NCKIPSD-209ENST00000470006 ACOT8O14734 319 aa15.44■□□□□ 0.06
NCKIPSD-209ENST00000470006 ANGPTL7O43827 346 aa15.44■□□□□ 0.06
NCKIPSD-209ENST00000470006 HLA-DQA2P01906 255 aa15.44■□□□□ 0.06
NCKIPSD-209ENST00000470006 PAX6P26367 422 aa15.44■□□□□ 0.06
NCKIPSD-209ENST00000470006 CDKN2AP42771 156 aaKnown RBP15.44■□□□□ 0.06
NCKIPSD-209ENST00000470006 HABP2Q14520 560 aaPredicted RBP15.44■□□□□ 0.06
NCKIPSD-209ENST00000470006 KRTAP27-1Q3LI81 207 aa15.44■□□□□ 0.06
NCKIPSD-209ENST00000470006 ARSJQ5FYB0 599 aaPredicted RBP15.44■□□□□ 0.06
NCKIPSD-209ENST00000470006 SLC18B1Q6NT16 456 aa15.44■□□□□ 0.06
NCKIPSD-209ENST00000470006 ERICH5Q6P6B1 374 aa15.44■□□□□ 0.06
NCKIPSD-209ENST00000470006 TMPRSS11FQ6ZWK6 438 aa15.44■□□□□ 0.06
NCKIPSD-209ENST00000470006 OFCC1Q8IZS5 231 aa15.44■□□□□ 0.06
NCKIPSD-209ENST00000470006 OR5T2Q8NGG2 359 aa15.44■□□□□ 0.06
NCKIPSD-209ENST00000470006 OR9Q1Q8NGQ5 310 aa15.44■□□□□ 0.06
NCKIPSD-209ENST00000470006 SPTSSAQ969W0 71 aa15.44■□□□□ 0.06
NCKIPSD-209ENST00000470006 ADA2Q9NZK5 511 aa15.44■□□□□ 0.06
NCKIPSD-209ENST00000470006 A0A087WUU8 490 aa15.43■□□□□ 0.06
NCKIPSD-209ENST00000470006 M0R135 149 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms