RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 MALLQ13021 153 aa12.64□□□□□ -0.39
COL9A3-209ENST00000469852 TIGD6Q17RP2 521 aa12.64□□□□□ -0.39
COL9A3-209ENST00000469852 AGAP6Q5VW22 663 aa12.64□□□□□ -0.39
COL9A3-209ENST00000469852 RNLSQ5VYX0 342 aa12.64□□□□□ -0.39
COL9A3-209ENST00000469852 UNQ6126/PRO20091Q6UXV3 157 aa12.64□□□□□ -0.39
COL9A3-209ENST00000469852 C20orf204Q6ZNR8 217 aa12.64□□□□□ -0.39
COL9A3-209ENST00000469852 C1orf174Q8IYL3 243 aa12.64□□□□□ -0.39
COL9A3-209ENST00000469852 ELMOD2Q8IZ81 293 aa12.64□□□□□ -0.39
COL9A3-209ENST00000469852 OR5AS1Q8N127 324 aa12.64□□□□□ -0.39
COL9A3-209ENST00000469852 ZCCHC24Q8N2G6 241 aaKnown RBP12.64□□□□□ -0.39
COL9A3-209ENST00000469852 OR52N1Q8NH53 320 aa12.64□□□□□ -0.39
COL9A3-209ENST00000469852 OR51E1Q8TCB6 317 aa12.64□□□□□ -0.39
COL9A3-209ENST00000469852 COG8Q96MW5 612 aa12.64□□□□□ -0.39
COL9A3-209ENST00000469852 OR5M11Q96RB7 305 aa12.64□□□□□ -0.39
COL9A3-209ENST00000469852 REPIN1Q9BWE0 567 aaKnown RBP12.64□□□□□ -0.39
COL9A3-209ENST00000469852 CCDC90BQ9GZT6 254 aa12.64□□□□□ -0.39
COL9A3-209ENST00000469852 MOB1AQ9H8S9 216 aa12.64□□□□□ -0.39
COL9A3-209ENST00000469852 TAAR3PQ9P1P4 343 aa12.64□□□□□ -0.39
COL9A3-209ENST00000469852 ST6GALNAC2Q9UJ37 374 aa12.64□□□□□ -0.39
COL9A3-209ENST00000469852 PURGQ9UJV8 347 aaKnown RBP12.64□□□□□ -0.39
COL9A3-209ENST00000469852 LSM2Q9Y333 95 aaKnown RBP12.64□□□□□ -0.39
COL9A3-209ENST00000469852 ANKRD17O75179 2603 aaKnown RBP12.64□□□□□ -0.39
COL9A3-209ENST00000469852 A0A1B0GTI1 187 aa12.63□□□□□ -0.39
COL9A3-209ENST00000469852 A0A1W2PPW3 197 aa12.63□□□□□ -0.39
COL9A3-209ENST00000469852 ACOD1A6NK06 481 aa12.63□□□□□ -0.39
COL9A3-209ENST00000469852 B9A039 149 aa12.63□□□□□ -0.39
COL9A3-209ENST00000469852 H3BSA7 217 aa12.63□□□□□ -0.39
COL9A3-209ENST00000469852 P2RY10O00398 339 aa12.63□□□□□ -0.39
COL9A3-209ENST00000469852 MYL12BO14950 172 aa12.63□□□□□ -0.39
COL9A3-209ENST00000469852 KITLGP21583 273 aa12.63□□□□□ -0.39
COL9A3-209ENST00000469852 TUBG1P23258 451 aa12.63□□□□□ -0.39
COL9A3-209ENST00000469852 EEF1B2P24534 225 aaKnown RBP12.63□□□□□ -0.39
COL9A3-209ENST00000469852 MMP15P51511 669 aa12.63□□□□□ -0.39
COL9A3-209ENST00000469852 GABARAPL2P60520 117 aa12.63□□□□□ -0.39
COL9A3-209ENST00000469852 FDX2Q6P4F2 183 aa12.63□□□□□ -0.39
COL9A3-209ENST00000469852 TMPRSS11AQ6ZMR5 421 aa12.63□□□□□ -0.39
COL9A3-209ENST00000469852 Q6ZR03 302 aa12.63□□□□□ -0.39
COL9A3-209ENST00000469852 PGAP1Q75T13 922 aa12.63□□□□□ -0.39
COL9A3-209ENST00000469852 PRSS48Q7RTY5 328 aa12.63□□□□□ -0.39
COL9A3-209ENST00000469852 MRPL21Q7Z2W9 205 aaKnown RBP12.63□□□□□ -0.39
COL9A3-209ENST00000469852 RDH10Q8IZV5 341 aa12.63□□□□□ -0.39
COL9A3-209ENST00000469852 ZFP41Q8N8Y5 198 aa12.63□□□□□ -0.39
COL9A3-209ENST00000469852 BHLHE23Q8NDY6 225 aa12.63□□□□□ -0.39
COL9A3-209ENST00000469852 MRPL48Q96GC5 212 aaKnown RBP12.63□□□□□ -0.39
COL9A3-209ENST00000469852 CCL19Q99731 98 aa12.63□□□□□ -0.39
COL9A3-209ENST00000469852 YTHDF1Q9BYJ9 559 aaKnown RBP12.63□□□□□ -0.39
COL9A3-209ENST00000469852 SP140LQ9H930 580 aa12.63□□□□□ -0.39
COL9A3-209ENST00000469852 GPR84Q9NQS5 396 aa12.63□□□□□ -0.39
COL9A3-209ENST00000469852 TUBG2Q9NRH3 451 aa12.63□□□□□ -0.39
COL9A3-209ENST00000469852 FAIMQ9NVQ4 179 aa12.63□□□□□ -0.39
COL9A3-209ENST00000469852 CHCHD3Q9NX63 227 aaKnown RBP12.63□□□□□ -0.39
COL9A3-209ENST00000469852 BLOC1S6Q9UL45 172 aa12.63□□□□□ -0.39
COL9A3-209ENST00000469852 LRCH1Q9Y2L9 728 aa12.63□□□□□ -0.39
COL9A3-209ENST00000469852 USF3Q68DE3 2245 aa12.62□□□□□ -0.39
COL9A3-209ENST00000469852 A0A0U1RQV5 110 aa12.62□□□□□ -0.39
COL9A3-209ENST00000469852 ZSCAN5BA6NJL1 495 aa12.62□□□□□ -0.39
COL9A3-209ENST00000469852 OR4C45A6NMZ5 311 aa12.62□□□□□ -0.39
COL9A3-209ENST00000469852 OVOL3O00110 214 aa12.62□□□□□ -0.39
COL9A3-209ENST00000469852 TIMM8AO60220 97 aaPredicted RBP12.62□□□□□ -0.39
COL9A3-209ENST00000469852 NAT2P11245 290 aa12.62□□□□□ -0.39
COL9A3-209ENST00000469852 ACKR3P25106 362 aa12.62□□□□□ -0.39
COL9A3-209ENST00000469852 EVX1P49640 407 aa12.62□□□□□ -0.39
COL9A3-209ENST00000469852 GSK3AP49840 483 aa12.62□□□□□ -0.39
COL9A3-209ENST00000469852 GBX2P52951 348 aaPredicted RBP12.62□□□□□ -0.39
COL9A3-209ENST00000469852 WNT4P56705 351 aa12.62□□□□□ -0.39
COL9A3-209ENST00000469852 ALKBH1Q13686 389 aaKnown RBP12.62□□□□□ -0.39
COL9A3-209ENST00000469852 OR56B2PQ8NGI1 322 aa12.62□□□□□ -0.39
COL9A3-209ENST00000469852 OR10AC1Q8NH08 325 aa12.62□□□□□ -0.39
COL9A3-209ENST00000469852 FAM71F1Q96KD3 344 aaPredicted RBP12.62□□□□□ -0.39
COL9A3-209ENST00000469852 CACNG6Q9BXT2 260 aa12.62□□□□□ -0.39
COL9A3-209ENST00000469852 PPP1R3EQ9H7J1 279 aa12.62□□□□□ -0.39
COL9A3-209ENST00000469852 MSL2Q9HCI7 577 aa12.62□□□□□ -0.39
COL9A3-209ENST00000469852 BABAM2Q9NXR7 383 aa12.62□□□□□ -0.39
COL9A3-209ENST00000469852 ERGIC3Q9Y282 383 aa12.62□□□□□ -0.39
COL9A3-209ENST00000469852 TRIM64A6NGJ6 449 aa12.61□□□□□ -0.39
COL9A3-209ENST00000469852 CD300LBA8K4G0 201 aa12.61□□□□□ -0.39
COL9A3-209ENST00000469852 VSTM5A8MXK1 200 aa12.61□□□□□ -0.39
COL9A3-209ENST00000469852 IQCF6A8MYZ5 107 aa12.61□□□□□ -0.39
COL9A3-209ENST00000469852 LMX1BO60663 402 aa12.61□□□□□ -0.39
COL9A3-209ENST00000469852 NDUFS7O75251 213 aa12.61□□□□□ -0.39
COL9A3-209ENST00000469852 RAF1P04049 648 aa12.61□□□□□ -0.39
COL9A3-209ENST00000469852 TGM4P49221 684 aa12.61□□□□□ -0.39
COL9A3-209ENST00000469852 CHN2P52757 468 aa12.61□□□□□ -0.39
COL9A3-209ENST00000469852 SNRPD2P62316 118 aaKnown RBP12.61□□□□□ -0.39
COL9A3-209ENST00000469852 CDK5R1Q15078 307 aa12.61□□□□□ -0.39
COL9A3-209ENST00000469852 OR8B8Q15620 311 aa12.61□□□□□ -0.39
COL9A3-209ENST00000469852 NKPD1Q17RQ9 610 aa12.61□□□□□ -0.39
COL9A3-209ENST00000469852 EGFL6Q8IUX8 553 aa12.61□□□□□ -0.39
COL9A3-209ENST00000469852 RPS4Y2Q8TD47 263 aa12.61□□□□□ -0.39
COL9A3-209ENST00000469852 RGP1Q92546 391 aaPredicted RBP12.61□□□□□ -0.39
COL9A3-209ENST00000469852 DVL3Q92997 716 aaPredicted RBP12.61□□□□□ -0.39
COL9A3-209ENST00000469852 PDCD1LG2Q9BQ51 273 aa12.61□□□□□ -0.39
COL9A3-209ENST00000469852 MND1Q9BWT6 205 aa12.61□□□□□ -0.39
COL9A3-209ENST00000469852 TPK1Q9H3S4 243 aa12.61□□□□□ -0.39
COL9A3-209ENST00000469852 PNMA8CA0A1B0GUJ8 204 aa12.6□□□□□ -0.39
COL9A3-209ENST00000469852 LOC107986453A0A1B0GWG9 222 aa12.6□□□□□ -0.39
COL9A3-209ENST00000469852 GGT3PA6NGU5 568 aa12.6□□□□□ -0.39
COL9A3-209ENST00000469852 H0YL77 283 aa12.6□□□□□ -0.39
COL9A3-209ENST00000469852 M0R233 179 aa12.6□□□□□ -0.39
COL9A3-209ENST00000469852 OGG1O15527 345 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms