RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 TEX12Q9BXU0 123 aa14.35□□□□□ -0.11
SSBP1-207ENST00000468267 SP140LQ9H930 580 aa14.35□□□□□ -0.11
SSBP1-207ENST00000468267 PAPOLBQ9NRJ5 636 aaKnown RBP14.35□□□□□ -0.11
SSBP1-207ENST00000468267 MRPL15Q9P015 296 aaKnown RBP14.35□□□□□ -0.11
SSBP1-207ENST00000468267 CEACAM18A8MTB9 384 aa14.34□□□□□ -0.11
SSBP1-207ENST00000468267 ZNF205O95201 554 aa14.34□□□□□ -0.11
SSBP1-207ENST00000468267 APOC1P02654 83 aa14.34□□□□□ -0.11
SSBP1-207ENST00000468267 WNT2P09544 360 aa14.34□□□□□ -0.11
SSBP1-207ENST00000468267 CPT2P23786 658 aa14.34□□□□□ -0.11
SSBP1-207ENST00000468267 HSD11B1P28845 292 aa14.34□□□□□ -0.11
SSBP1-207ENST00000468267 OPRL1P41146 370 aa14.34□□□□□ -0.11
SSBP1-207ENST00000468267 DAPP51397 102 aa14.34□□□□□ -0.11
SSBP1-207ENST00000468267 RAD23AP54725 363 aa14.34□□□□□ -0.11
SSBP1-207ENST00000468267 SEC61A1P61619 476 aaKnown RBP14.34□□□□□ -0.11
SSBP1-207ENST00000468267 KLHL12Q53G59 568 aa14.34□□□□□ -0.11
SSBP1-207ENST00000468267 PRSS45Q7RTY3 260 aa14.34□□□□□ -0.11
SSBP1-207ENST00000468267 C1QL2Q7Z5L3 287 aa14.34□□□□□ -0.11
SSBP1-207ENST00000468267 C1orf87Q8N0U7 546 aa14.34□□□□□ -0.11
SSBP1-207ENST00000468267 ZNF454Q8N9F8 522 aa14.34□□□□□ -0.11
SSBP1-207ENST00000468267 OR5K1Q8NHB7 308 aa14.34□□□□□ -0.11
SSBP1-207ENST00000468267 OTOSQ8NHW6 89 aa14.34□□□□□ -0.11
SSBP1-207ENST00000468267 PLEKHA8Q96JA3 519 aa14.34□□□□□ -0.11
SSBP1-207ENST00000468267 MMADHCQ9H3L0 296 aaPredicted RBP14.34□□□□□ -0.11
SSBP1-207ENST00000468267 C7orf69Q9H7B7 122 aa14.34□□□□□ -0.11
SSBP1-207ENST00000468267 KIF17Q9P2E2 1029 aa14.34□□□□□ -0.11
SSBP1-207ENST00000468267 OPN4Q9UHM6 478 aa14.34□□□□□ -0.11
SSBP1-207ENST00000468267 TENM1Q9UKZ4 2725 aa14.33□□□□□ -0.12
SSBP1-207ENST00000468267 A8MXK9 166 aa14.33□□□□□ -0.12
SSBP1-207ENST00000468267 TRAPPC2LH3BP13 241 aa14.33□□□□□ -0.12
SSBP1-207ENST00000468267 TBX1O43435 398 aa14.33□□□□□ -0.12
SSBP1-207ENST00000468267 SELENOFO60613 162 aa14.33□□□□□ -0.12
SSBP1-207ENST00000468267 PTBP3O95758 552 aaKnown RBP14.33□□□□□ -0.12
SSBP1-207ENST00000468267 ANXA2P07355 339 aaKnown RBP14.33□□□□□ -0.12
SSBP1-207ENST00000468267 SLC2A5P22732 501 aa14.33□□□□□ -0.12
SSBP1-207ENST00000468267 DDOSTP39656 456 aa14.33□□□□□ -0.12
SSBP1-207ENST00000468267 CRISP1P54107 249 aa14.33□□□□□ -0.12
SSBP1-207ENST00000468267 MPPED2Q15777 294 aa14.33□□□□□ -0.12
SSBP1-207ENST00000468267 ATP6AP1Q15904 470 aa14.33□□□□□ -0.12
SSBP1-207ENST00000468267 SLC35D3Q5M8T2 416 aa14.33□□□□□ -0.12
SSBP1-207ENST00000468267 KLBQ86Z14 1044 aa14.33□□□□□ -0.12
SSBP1-207ENST00000468267 PARP8Q8N3A8 854 aa14.33□□□□□ -0.12
SSBP1-207ENST00000468267 BBS1Q8NFJ9 593 aa14.33□□□□□ -0.12
SSBP1-207ENST00000468267 OR56B2PQ8NGI1 322 aa14.33□□□□□ -0.12
SSBP1-207ENST00000468267 OR11L1Q8NGX0 322 aa14.33□□□□□ -0.12
SSBP1-207ENST00000468267 SGK3Q96BR1 496 aa14.33□□□□□ -0.12
SSBP1-207ENST00000468267 TMEM246Q9BRR3 403 aa14.33□□□□□ -0.12
SSBP1-207ENST00000468267 ADAT1Q9BUB4 502 aaKnown RBP14.33□□□□□ -0.12
SSBP1-207ENST00000468267 C19orf24Q9BVV8 132 aa14.33□□□□□ -0.12
SSBP1-207ENST00000468267 MMP26Q9NRE1 261 aa14.33□□□□□ -0.12
SSBP1-207ENST00000468267 UFSP2Q9NUQ7 469 aa14.33□□□□□ -0.12
SSBP1-207ENST00000468267 TVP23BQ9NYZ1 205 aa14.33□□□□□ -0.12
SSBP1-207ENST00000468267 FBN3Q75N90 2809 aa14.32□□□□□ -0.12
SSBP1-207ENST00000468267 A0A0A6YYJ9 748 aa14.32□□□□□ -0.12
SSBP1-207ENST00000468267 FAM20BO75063 409 aa14.32□□□□□ -0.12
SSBP1-207ENST00000468267 LYNP07948 512 aa14.32□□□□□ -0.12
SSBP1-207ENST00000468267 H2BFMP0C1H6 154 aa14.32□□□□□ -0.12
SSBP1-207ENST00000468267 IRF2P14316 349 aa14.32□□□□□ -0.12
SSBP1-207ENST00000468267 ADRA2CP18825 462 aa14.32□□□□□ -0.12
SSBP1-207ENST00000468267 ZNF121P58317 390 aaPredicted RBP14.32□□□□□ -0.12
SSBP1-207ENST00000468267 FAM3AP98173 230 aa14.32□□□□□ -0.12
SSBP1-207ENST00000468267 SNAPC1Q16533 368 aa14.32□□□□□ -0.12
SSBP1-207ENST00000468267 TIGD6Q17RP2 521 aa14.32□□□□□ -0.12
SSBP1-207ENST00000468267 ZNF404Q494X3 552 aa14.32□□□□□ -0.12
SSBP1-207ENST00000468267 ESCO2Q56NI9 601 aa14.32□□□□□ -0.12
SSBP1-207ENST00000468267 FAM201AQ5SY85 155 aa14.32□□□□□ -0.12
SSBP1-207ENST00000468267 PRAMEF6Q5VXH4 476 aa14.32□□□□□ -0.12
SSBP1-207ENST00000468267 FAM57BQ71RH2 274 aa14.32□□□□□ -0.12
SSBP1-207ENST00000468267 SLC16A9Q7RTY1 509 aa14.32□□□□□ -0.12
SSBP1-207ENST00000468267 SPERTQ8NA61 448 aa14.32□□□□□ -0.12
SSBP1-207ENST00000468267 PLPP7Q8NBV4 271 aa14.32□□□□□ -0.12
SSBP1-207ENST00000468267 OR52H1Q8NGJ2 320 aa14.32□□□□□ -0.12
SSBP1-207ENST00000468267 NANPQ8TBE9 248 aa14.32□□□□□ -0.12
SSBP1-207ENST00000468267 THEM6Q8WUY1 208 aa14.32□□□□□ -0.12
SSBP1-207ENST00000468267 REEP6Q96HR9 211 aa14.32□□□□□ -0.12
SSBP1-207ENST00000468267 FN3KRPQ9HA64 309 aa14.32□□□□□ -0.12
SSBP1-207ENST00000468267 MIOXQ9UGB7 285 aa14.32□□□□□ -0.12
SSBP1-207ENST00000468267 LRCH1Q9Y2L9 728 aa14.32□□□□□ -0.12
SSBP1-207ENST00000468267 PPIAL4AQ9Y536 164 aa14.32□□□□□ -0.12
SSBP1-207ENST00000468267 RPS2P15880 293 aaKnown RBP14.31□□□□□ -0.12
SSBP1-207ENST00000468267 EPHA1P21709 976 aa14.31□□□□□ -0.12
SSBP1-207ENST00000468267 RPS7P62081 194 aaKnown RBP14.31□□□□□ -0.12
SSBP1-207ENST00000468267 ESRRGP62508 458 aa14.31□□□□□ -0.12
SSBP1-207ENST00000468267 APOFQ13790 326 aa14.31□□□□□ -0.12
SSBP1-207ENST00000468267 PTGES3Q15185 160 aaKnown RBP14.31□□□□□ -0.12
SSBP1-207ENST00000468267 C1orf146Q5VVC0 180 aa14.31□□□□□ -0.12
SSBP1-207ENST00000468267 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.31□□□□□ -0.12
SSBP1-207ENST00000468267 DEFB108BQ8NET1 73 aa14.31□□□□□ -0.12
SSBP1-207ENST00000468267 DUS3LQ96G46 650 aaKnown RBP14.31□□□□□ -0.12
SSBP1-207ENST00000468267 OR10A2Q9H208 303 aa14.31□□□□□ -0.12
SSBP1-207ENST00000468267 DNAJC27Q9NZQ0 273 aa14.31□□□□□ -0.12
SSBP1-207ENST00000468267 ZNF319Q9P2F9 582 aa14.31□□□□□ -0.12
SSBP1-207ENST00000468267 RNF7Q9UBF6 113 aa14.31□□□□□ -0.12
SSBP1-207ENST00000468267 KLHDC2Q9Y2U9 406 aa14.31□□□□□ -0.12
SSBP1-207ENST00000468267 AP4S1Q9Y587 144 aa14.31□□□□□ -0.12
SSBP1-207ENST00000468267 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.3□□□□□ -0.12
SSBP1-207ENST00000468267 ANKRD30BLA7E2S9 258 aa14.3□□□□□ -0.12
SSBP1-207ENST00000468267 G3V2T6 193 aa14.3□□□□□ -0.12
SSBP1-207ENST00000468267 FSHBP01225 129 aa14.3□□□□□ -0.12
SSBP1-207ENST00000468267 ZNF12P17014 697 aa14.3□□□□□ -0.12
SSBP1-207ENST00000468267 CFL1P23528 166 aaKnown RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms