RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 C20orf141Q9NUB4 165 aa3.35□□□□□ -1.87
SSR3-204ENST00000467733 ATAD3AQ9NVI7 634 aa3.35□□□□□ -1.87
SSR3-204ENST00000467733 ZNRD1Q9P1U0 126 aa3.35□□□□□ -1.87
SSR3-204ENST00000467733 CLN8Q9UBY8 286 aa3.35□□□□□ -1.87
SSR3-204ENST00000467733 BAIAP2L1Q9UHR4 511 aa3.35□□□□□ -1.87
SSR3-204ENST00000467733 PPP1R3CQ9UQK1 317 aa3.35□□□□□ -1.87
SSR3-204ENST00000467733 PPP2R2CQ9Y2T4 447 aa3.35□□□□□ -1.87
SSR3-204ENST00000467733 HECTD4Q9Y4D8 3996 aa3.35□□□□□ -1.87
SSR3-204ENST00000467733 A0A1B0GUV1 79 aa3.34□□□□□ -1.87
SSR3-204ENST00000467733 IQCMA0A1B0GVH7 501 aa3.34□□□□□ -1.87
SSR3-204ENST00000467733 ANKRD61A6NGH8 418 aa3.34□□□□□ -1.87
SSR3-204ENST00000467733 TMEM114B3SHH9 223 aa3.34□□□□□ -1.87
SSR3-204ENST00000467733 LSM1O15116 133 aaKnown RBP3.34□□□□□ -1.87
SSR3-204ENST00000467733 SURF4O15260 269 aa3.34□□□□□ -1.87
SSR3-204ENST00000467733 CFLARO15519 480 aa3.34□□□□□ -1.87
SSR3-204ENST00000467733 HSPA12AO43301 675 aa3.34□□□□□ -1.87
SSR3-204ENST00000467733 TIPRLO75663 272 aa3.34□□□□□ -1.87
SSR3-204ENST00000467733 FARS2O95363 451 aaKnown RBP3.34□□□□□ -1.87
SSR3-204ENST00000467733 DUS4LO95620 317 aaKnown RBP3.34□□□□□ -1.87
SSR3-204ENST00000467733 FSTL3O95633 263 aa3.34□□□□□ -1.87
SSR3-204ENST00000467733 HPRP00739 348 aa3.34□□□□□ -1.87
SSR3-204ENST00000467733 GSTA1P08263 222 aa3.34□□□□□ -1.87
SSR3-204ENST00000467733 INHBAP08476 426 aa3.34□□□□□ -1.87
SSR3-204ENST00000467733 IGHV4-30-4P0DP06 118 aa3.34□□□□□ -1.87
SSR3-204ENST00000467733 TCP1P17987 556 aaKnown RBP3.34□□□□□ -1.87
SSR3-204ENST00000467733 GRPRP30550 384 aa3.34□□□□□ -1.87
SSR3-204ENST00000467733 APLNRP35414 380 aa3.34□□□□□ -1.87
SSR3-204ENST00000467733 RPL4P36578 427 aaKnown RBP3.34□□□□□ -1.87
SSR3-204ENST00000467733 WNT5AP41221 380 aa3.34□□□□□ -1.87
SSR3-204ENST00000467733 ACAA2P42765 397 aaKnown RBP3.34□□□□□ -1.87
SSR3-204ENST00000467733 KIR2DS4P43632 304 aa3.34□□□□□ -1.87
SSR3-204ENST00000467733 RPS5P46782 204 aaKnown RBP3.34□□□□□ -1.87
SSR3-204ENST00000467733 CSNK1A1P48729 337 aa3.34□□□□□ -1.87
SSR3-204ENST00000467733 SERPINB9P50453 376 aa3.34□□□□□ -1.87
SSR3-204ENST00000467733 NAA20P61599 178 aa3.34□□□□□ -1.87
SSR3-204ENST00000467733 COPZ1P61923 177 aa3.34□□□□□ -1.87
SSR3-204ENST00000467733 GNA13Q14344 377 aa3.34□□□□□ -1.87
SSR3-204ENST00000467733 ZNF404Q494X3 552 aa3.34□□□□□ -1.87
SSR3-204ENST00000467733 SLC36A2Q495M3 483 aa3.34□□□□□ -1.87
SSR3-204ENST00000467733 RFTN2Q52LD8 501 aaPredicted RBP3.34□□□□□ -1.87
SSR3-204ENST00000467733 GPAT3Q53EU6 434 aa3.34□□□□□ -1.87
SSR3-204ENST00000467733 XKR7Q5GH72 579 aa3.34□□□□□ -1.87
SSR3-204ENST00000467733 THEM4Q5T1C6 240 aa3.34□□□□□ -1.87
SSR3-204ENST00000467733 FAM69AQ5T7M9 428 aa3.34□□□□□ -1.87
SSR3-204ENST00000467733 WDR25Q64LD2 544 aaPredicted RBP3.34□□□□□ -1.87
SSR3-204ENST00000467733 SLC35E4Q6ICL7 350 aa3.34□□□□□ -1.87
SSR3-204ENST00000467733 SLC27A4Q6P1M0 643 aa3.34□□□□□ -1.87
SSR3-204ENST00000467733 TNFAIP8L2Q6P589 184 aaPredicted RBP3.34□□□□□ -1.87
SSR3-204ENST00000467733 C5orf46Q6UWT4 87 aa3.34□□□□□ -1.87
SSR3-204ENST00000467733 UNQ6126/PRO20091Q6UXV3 157 aa3.34□□□□□ -1.87
SSR3-204ENST00000467733 RFPL4BQ6ZWI9 263 aa3.34□□□□□ -1.87
SSR3-204ENST00000467733 C6orf120Q7Z4R8 191 aa3.34□□□□□ -1.87
SSR3-204ENST00000467733 ZER1Q7Z7L7 766 aa3.34□□□□□ -1.87
SSR3-204ENST00000467733 LCA5Q86VQ0 697 aa3.34□□□□□ -1.87
SSR3-204ENST00000467733 ZNF101Q8IZC7 436 aa3.34□□□□□ -1.87
SSR3-204ENST00000467733 SLC35F6Q8N357 371 aa3.34□□□□□ -1.87
SSR3-204ENST00000467733 CADM2Q8N3J6 435 aa3.34□□□□□ -1.87
SSR3-204ENST00000467733 SLC22A24Q8N4F4 322 aa3.34□□□□□ -1.87
SSR3-204ENST00000467733 CCNYL1Q8N7R7 359 aa3.34□□□□□ -1.87
SSR3-204ENST00000467733 RBM15BQ8NDT2 890 aaKnown RBP3.34□□□□□ -1.87
SSR3-204ENST00000467733 OR6N1Q8NGY5 312 aa3.34□□□□□ -1.87
SSR3-204ENST00000467733 OR5R1Q8NH85 324 aa3.34□□□□□ -1.87
SSR3-204ENST00000467733 OR2T6Q8NHC8 308 aa3.34□□□□□ -1.87
SSR3-204ENST00000467733 SLC25A40Q8TBP6 338 aa3.34□□□□□ -1.87
SSR3-204ENST00000467733 KLF14Q8TD94 323 aaPredicted RBP3.34□□□□□ -1.87
SSR3-204ENST00000467733 ITLN1Q8WWA0 313 aa3.34□□□□□ -1.87
SSR3-204ENST00000467733 ERGIC1Q969X5 290 aa3.34□□□□□ -1.87
SSR3-204ENST00000467733 RNF125Q96EQ8 232 aa3.34□□□□□ -1.87
SSR3-204ENST00000467733 WDFY2Q96P53 400 aa3.34□□□□□ -1.87
SSR3-204ENST00000467733 TRNT1Q96Q11 434 aaKnown RBP3.34□□□□□ -1.87
SSR3-204ENST00000467733 SH3GL3Q99963 347 aa3.34□□□□□ -1.87
SSR3-204ENST00000467733 TMEM246Q9BRR3 403 aa3.34□□□□□ -1.87
SSR3-204ENST00000467733 ERP44Q9BS26 406 aa3.34□□□□□ -1.87
SSR3-204ENST00000467733 EMC6Q9BV81 110 aa3.34□□□□□ -1.87
SSR3-204ENST00000467733 C1QTNF4Q9BXJ3 329 aa3.34□□□□□ -1.87
SSR3-204ENST00000467733 SIRPDQ9H106 197 aa3.34□□□□□ -1.87
SSR3-204ENST00000467733 SLC38A1Q9H2H9 487 aa3.34□□□□□ -1.87
SSR3-204ENST00000467733 PPA2Q9H2U2 334 aa3.34□□□□□ -1.87
SSR3-204ENST00000467733 TMEM38BQ9NVV0 291 aa3.34□□□□□ -1.87
SSR3-204ENST00000467733 KCNG2Q9UJ96 466 aa3.34□□□□□ -1.87
SSR3-204ENST00000467733 RPUSD1Q9UJJ7 312 aaKnown RBP3.34□□□□□ -1.87
SSR3-204ENST00000467733 GTF2A1LQ9UNN4 478 aa3.34□□□□□ -1.87
SSR3-204ENST00000467733 SIGLEC9Q9Y336 463 aa3.34□□□□□ -1.87
SSR3-204ENST00000467733 CAB39Q9Y376 341 aaPredicted RBP3.34□□□□□ -1.87
SSR3-204ENST00000467733 PLECQ15149 4684 aaKnown RBP3.34□□□□□ -1.88
SSR3-204ENST00000467733 SORL1Q92673 2214 aa3.34□□□□□ -1.88
SSR3-204ENST00000467733 OR2T1O43869 369 aa3.33□□□□□ -1.88
SSR3-204ENST00000467733 TIMM8AO60220 97 aaPredicted RBP3.33□□□□□ -1.88
SSR3-204ENST00000467733 LYPLA1O75608 230 aaPredicted RBP3.33□□□□□ -1.88
SSR3-204ENST00000467733 OPN1SWP03999 348 aa3.33□□□□□ -1.88
SSR3-204ENST00000467733 LIPFP07098 398 aa3.33□□□□□ -1.88
SSR3-204ENST00000467733 DBIP07108 87 aaKnown RBP3.33□□□□□ -1.88
SSR3-204ENST00000467733 GKN3PP0CG01 181 aa3.33□□□□□ -1.88
SSR3-204ENST00000467733 CD28P10747 220 aa3.33□□□□□ -1.88
SSR3-204ENST00000467733 HLA-DOBP13765 273 aa3.33□□□□□ -1.88
SSR3-204ENST00000467733 NQO1P15559 274 aaKnown RBP3.33□□□□□ -1.88
SSR3-204ENST00000467733 IL7RP16871 459 aa3.33□□□□□ -1.88
SSR3-204ENST00000467733 NCF2P19878 526 aaPredicted RBP3.33□□□□□ -1.88
SSR3-204ENST00000467733 PHBP35232 272 aa3.33□□□□□ -1.88
SSR3-204ENST00000467733 NPY4RP50391 375 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms