RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 PRAMEF7Q5VXH5 474 aa4.52□□□□□ -1.69
PTCD3-207ENST00000467273 CARD17Q5XLA6 110 aa4.52□□□□□ -1.69
PTCD3-207ENST00000467273 TMEM225Q6GV28 225 aa4.52□□□□□ -1.69
PTCD3-207ENST00000467273 LRRN1Q6UXK5 716 aa4.52□□□□□ -1.69
PTCD3-207ENST00000467273 GPRIN3Q6ZVF9 776 aa4.52□□□□□ -1.69
PTCD3-207ENST00000467273 CREB3L2Q70SY1 520 aa4.52□□□□□ -1.69
PTCD3-207ENST00000467273 MDP1Q86V88 176 aa4.52□□□□□ -1.69
PTCD3-207ENST00000467273 TIGD4Q8IY51 512 aa4.52□□□□□ -1.69
PTCD3-207ENST00000467273 SPICQ8N5J4 248 aa4.52□□□□□ -1.69
PTCD3-207ENST00000467273 NATD1Q8N6N6 113 aa4.52□□□□□ -1.69
PTCD3-207ENST00000467273 ICA1LQ8NDH6 482 aa4.52□□□□□ -1.69
PTCD3-207ENST00000467273 ZNF563Q8TA94 476 aa4.52□□□□□ -1.69
PTCD3-207ENST00000467273 MOAP1Q96BY2 351 aa4.52□□□□□ -1.69
PTCD3-207ENST00000467273 C16orf58Q96GQ5 468 aa4.52□□□□□ -1.69
PTCD3-207ENST00000467273 ALKBH3Q96Q83 286 aaPredicted RBP4.52□□□□□ -1.69
PTCD3-207ENST00000467273 MRPL57Q9BQC6 102 aaKnown RBP4.52□□□□□ -1.69
PTCD3-207ENST00000467273 EBPLQ9BY08 206 aa4.52□□□□□ -1.69
PTCD3-207ENST00000467273 CHIAQ9BZP6 476 aa4.52□□□□□ -1.69
PTCD3-207ENST00000467273 OR11A1Q9GZK7 315 aa4.52□□□□□ -1.69
PTCD3-207ENST00000467273 HDHD2Q9H0R4 259 aa4.52□□□□□ -1.69
PTCD3-207ENST00000467273 C16orf95Q9H693 158 aa4.52□□□□□ -1.69
PTCD3-207ENST00000467273 C8orf4Q9NR00 106 aa4.52□□□□□ -1.69
PTCD3-207ENST00000467273 ZCCHC3Q9NUD5 404 aaKnown RBP4.52□□□□□ -1.69
PTCD3-207ENST00000467273 B3GNT2Q9NY97 397 aa4.52□□□□□ -1.69
PTCD3-207ENST00000467273 NLKQ9UBE8 527 aa4.52□□□□□ -1.69
PTCD3-207ENST00000467273 FAF1Q9UNN5 650 aaPredicted RBP4.52□□□□□ -1.69
PTCD3-207ENST00000467273 RASD1Q9Y272 281 aa4.52□□□□□ -1.69
PTCD3-207ENST00000467273 TMED7-TICAM2A0A0A6YYA0 188 aa4.51□□□□□ -1.69
PTCD3-207ENST00000467273 TEX13CA0A0J9YWL9 993 aa4.51□□□□□ -1.69
PTCD3-207ENST00000467273 TRAPPC2LH3BP13 241 aa4.51□□□□□ -1.69
PTCD3-207ENST00000467273 ZNF701M0R085 212 aaPredicted RBP4.51□□□□□ -1.69
PTCD3-207ENST00000467273 PPP6CO00743 305 aa4.51□□□□□ -1.69
PTCD3-207ENST00000467273 PAGE4O60829 102 aa4.51□□□□□ -1.69
PTCD3-207ENST00000467273 ENTPD5O75356 428 aa4.51□□□□□ -1.69
PTCD3-207ENST00000467273 WBP4O75554 376 aaKnown RBP4.51□□□□□ -1.69
PTCD3-207ENST00000467273 STX11O75558 287 aa4.51□□□□□ -1.69
PTCD3-207ENST00000467273 HLA-DQA2P01906 255 aa4.51□□□□□ -1.69
PTCD3-207ENST00000467273 PRB2P02812 416 aaPredicted RBP4.51□□□□□ -1.69
PTCD3-207ENST00000467273 LCATP04180 440 aa4.51□□□□□ -1.69
PTCD3-207ENST00000467273 IGHV4-38-2P0DP08 117 aa4.51□□□□□ -1.69
PTCD3-207ENST00000467273 IDO1P14902 403 aa4.51□□□□□ -1.69
PTCD3-207ENST00000467273 RPA2P15927 270 aa4.51□□□□□ -1.69
PTCD3-207ENST00000467273 SRMP19623 302 aa4.51□□□□□ -1.69
PTCD3-207ENST00000467273 NCF2P19878 526 aaPredicted RBP4.51□□□□□ -1.69
PTCD3-207ENST00000467273 CFL1P23528 166 aaKnown RBP4.51□□□□□ -1.69
PTCD3-207ENST00000467273 CDH13P55290 713 aa4.51□□□□□ -1.69
PTCD3-207ENST00000467273 PDE7AQ13946 482 aa4.51□□□□□ -1.69
PTCD3-207ENST00000467273 IMPG1Q17R60 797 aa4.51□□□□□ -1.69
PTCD3-207ENST00000467273 TMEM155Q4W5P6 130 aa4.51□□□□□ -1.69
PTCD3-207ENST00000467273 IFI44LQ53G44 452 aa4.51□□□□□ -1.69
PTCD3-207ENST00000467273 ESCO2Q56NI9 601 aa4.51□□□□□ -1.69
PTCD3-207ENST00000467273 CLVS2Q5SYC1 327 aa4.51□□□□□ -1.69
PTCD3-207ENST00000467273 NOXRED1Q6NXP6 359 aa4.51□□□□□ -1.69
PTCD3-207ENST00000467273 BTNL3Q6UXE8 466 aa4.51□□□□□ -1.69
PTCD3-207ENST00000467273 GDPGP1Q6ZNW5 385 aa4.51□□□□□ -1.69
PTCD3-207ENST00000467273 COLCA1Q6ZS62 124 aa4.51□□□□□ -1.69
PTCD3-207ENST00000467273 GPAT4Q86UL3 456 aa4.51□□□□□ -1.69
PTCD3-207ENST00000467273 LRP11Q86VZ4 500 aa4.51□□□□□ -1.69
PTCD3-207ENST00000467273 LRRC8AQ8IWT6 810 aa4.51□□□□□ -1.69
PTCD3-207ENST00000467273 C1orf174Q8IYL3 243 aa4.51□□□□□ -1.69
PTCD3-207ENST00000467273 GPR137CQ8N3F9 429 aa4.51□□□□□ -1.69
PTCD3-207ENST00000467273 ZSCAN4Q8NAM6 433 aaPredicted RBP4.51□□□□□ -1.69
PTCD3-207ENST00000467273 FNDC5Q8NAU1 212 aa4.51□□□□□ -1.69
PTCD3-207ENST00000467273 OCC1Q8TAD7 63 aa4.51□□□□□ -1.69
PTCD3-207ENST00000467273 ZNF519Q8TB69 540 aa4.51□□□□□ -1.69
PTCD3-207ENST00000467273 TAF15Q92804 592 aaKnown RBP eCLIP4.51□□□□□ -1.69
PTCD3-207ENST00000467273 PPCDCQ96CD2 204 aa4.51□□□□□ -1.69
PTCD3-207ENST00000467273 SLC41A3Q96GZ6 507 aa4.51□□□□□ -1.69
PTCD3-207ENST00000467273 ZNF75AQ96N20 296 aa4.51□□□□□ -1.69
PTCD3-207ENST00000467273 SDF2Q99470 211 aa4.51□□□□□ -1.69
PTCD3-207ENST00000467273 EGLN1Q9GZT9 426 aa4.51□□□□□ -1.69
PTCD3-207ENST00000467273 C1orf198Q9H425 327 aa4.51□□□□□ -1.69
PTCD3-207ENST00000467273 REEP4Q9H6H4 257 aa4.51□□□□□ -1.69
PTCD3-207ENST00000467273 PATZ1Q9HBE1 687 aaKnown RBP4.51□□□□□ -1.69
PTCD3-207ENST00000467273 RRAGDQ9NQL2 400 aaPredicted RBP4.51□□□□□ -1.69
PTCD3-207ENST00000467273 MMP26Q9NRE1 261 aa4.51□□□□□ -1.69
PTCD3-207ENST00000467273 SLC6A13Q9NSD5 602 aa4.51□□□□□ -1.69
PTCD3-207ENST00000467273 HAO2Q9NYQ3 351 aa4.51□□□□□ -1.69
PTCD3-207ENST00000467273 TAAR3PQ9P1P4 343 aa4.51□□□□□ -1.69
PTCD3-207ENST00000467273 MYEF2Q9P2K5 600 aaKnown RBP4.51□□□□□ -1.69
PTCD3-207ENST00000467273 HSPB7Q9UBY9 170 aa4.51□□□□□ -1.69
PTCD3-207ENST00000467273 OR5V1Q9UGF6 321 aa4.51□□□□□ -1.69
PTCD3-207ENST00000467273 MKLN1Q9UL63 735 aa4.51□□□□□ -1.69
PTCD3-207ENST00000467273 DHDHQ9UQ10 334 aa4.51□□□□□ -1.69
PTCD3-207ENST00000467273 TMED7Q9Y3B3 224 aa4.51□□□□□ -1.69
PTCD3-207ENST00000467273 TANC2Q9HCD6 1990 aa4.51□□□□□ -1.69
PTCD3-207ENST00000467273 A0A0A0MQY5 61 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 TRAV40A0A0B4J280 105 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 LOC105371267A0A1B0GV96 52 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 ISPDA4D126 451 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 CGB1A6NKQ9 187 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 A8MT66 165 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 C12orf71A8MTZ7 269 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 LANCL1O43813 399 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 GPR137BO60478 399 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 UPK3AO75631 287 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 UGT2B17O75795 530 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 SERPINI2O75830 405 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 UBL3O95164 117 aa4.5□□□□□ -1.69
PTCD3-207ENST00000467273 SNAP29O95721 258 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms