RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 OR4D10Q8NGI6 311 aa11.87□□□□□ -0.51
UBE4B-206ENST00000466379 C15orf40Q8WUR7 153 aa11.87□□□□□ -0.51
UBE4B-206ENST00000466379 AKAP1Q92667 903 aaKnown RBP eCLIP11.87□□□□□ -0.51
UBE4B-206ENST00000466379 SPTSSAQ969W0 71 aa11.87□□□□□ -0.51
UBE4B-206ENST00000466379 CMBLQ96DG6 245 aa11.87□□□□□ -0.51
UBE4B-206ENST00000466379 PRRG4Q9BZD6 226 aa11.87□□□□□ -0.51
UBE4B-206ENST00000466379 OR10A4Q9H209 315 aa11.87□□□□□ -0.51
UBE4B-206ENST00000466379 PAQR5Q9NXK6 330 aaPredicted RBP11.87□□□□□ -0.51
UBE4B-206ENST00000466379 MTFP1Q9UDX5 166 aa11.87□□□□□ -0.51
UBE4B-206ENST00000466379 DNAJC13O75165 2243 aa11.87□□□□□ -0.51
UBE4B-206ENST00000466379 IGKV1-9A0A0C4DH69 117 aa11.86□□□□□ -0.51
UBE4B-206ENST00000466379 SYNGR3O43761 229 aa11.86□□□□□ -0.51
UBE4B-206ENST00000466379 SYNGR4O95473 234 aa11.86□□□□□ -0.51
UBE4B-206ENST00000466379 IGLV3-1P01715 115 aa11.86□□□□□ -0.51
UBE4B-206ENST00000466379 HCKP08631 526 aa11.86□□□□□ -0.51
UBE4B-206ENST00000466379 GSTT2BP0CG30 244 aa11.86□□□□□ -0.51
UBE4B-206ENST00000466379 VSIG8P0DPA2 414 aa11.86□□□□□ -0.51
UBE4B-206ENST00000466379 FAHP16930 419 aa11.86□□□□□ -0.51
UBE4B-206ENST00000466379 OTX1P32242 354 aaPredicted RBP11.86□□□□□ -0.51
UBE4B-206ENST00000466379 PRSS3P35030 304 aa11.86□□□□□ -0.51
UBE4B-206ENST00000466379 RAB35Q15286 201 aa11.86□□□□□ -0.51
UBE4B-206ENST00000466379 OLFML2AQ68BL7 652 aa11.86□□□□□ -0.51
UBE4B-206ENST00000466379 RTN4RL2Q86UN3 420 aa11.86□□□□□ -0.51
UBE4B-206ENST00000466379 ANGPTL5Q86XS5 388 aa11.86□□□□□ -0.51
UBE4B-206ENST00000466379 SKA3Q8IX90 412 aa11.86□□□□□ -0.51
UBE4B-206ENST00000466379 OR2AE1Q8NHA4 323 aa11.86□□□□□ -0.51
UBE4B-206ENST00000466379 GIMAP1Q8WWP7 306 aa11.86□□□□□ -0.51
UBE4B-206ENST00000466379 DACT3Q96B18 629 aaPredicted RBP11.86□□□□□ -0.51
UBE4B-206ENST00000466379 MS4A3Q96HJ5 214 aa11.86□□□□□ -0.51
UBE4B-206ENST00000466379 EXO5Q9H790 373 aa11.86□□□□□ -0.51
UBE4B-206ENST00000466379 CNOT1A5YKK6 2376 aaKnown RBP11.86□□□□□ -0.51
UBE4B-206ENST00000466379 WIPF3A6NGB9 483 aa11.86□□□□□ -0.51
UBE4B-206ENST00000466379 SMLR1H3BR10 107 aa11.86□□□□□ -0.51
UBE4B-206ENST00000466379 ZNHIT1O43257 154 aa11.86□□□□□ -0.51
UBE4B-206ENST00000466379 NAT2P11245 290 aa11.86□□□□□ -0.51
UBE4B-206ENST00000466379 NAT1P18440 290 aa11.86□□□□□ -0.51
UBE4B-206ENST00000466379 CRYGSP22914 178 aa11.86□□□□□ -0.51
UBE4B-206ENST00000466379 RRADP55042 308 aa11.86□□□□□ -0.51
UBE4B-206ENST00000466379 FOXG1P55316 489 aaPredicted RBP11.86□□□□□ -0.51
UBE4B-206ENST00000466379 PSG4Q00888 419 aa11.86□□□□□ -0.51
UBE4B-206ENST00000466379 FCN2Q15485 313 aa11.86□□□□□ -0.51
UBE4B-206ENST00000466379 LINC00303Q3SY05 128 aa11.86□□□□□ -0.51
UBE4B-206ENST00000466379 SLC16A14Q7RTX9 510 aa11.86□□□□□ -0.51
UBE4B-206ENST00000466379 ZFP62Q8NB50 900 aaPredicted RBP11.86□□□□□ -0.51
UBE4B-206ENST00000466379 FDCSPQ8NFU4 85 aa11.86□□□□□ -0.51
UBE4B-206ENST00000466379 OR8S1Q8NH09 359 aa11.86□□□□□ -0.51
UBE4B-206ENST00000466379 OR1F12Q8NHA8 337 aa11.86□□□□□ -0.51
UBE4B-206ENST00000466379 DVL3Q92997 716 aaPredicted RBP11.86□□□□□ -0.51
UBE4B-206ENST00000466379 TMEM45BQ96B21 275 aa11.86□□□□□ -0.51
UBE4B-206ENST00000466379 SCMH1Q96GD3 660 aa11.86□□□□□ -0.51
UBE4B-206ENST00000466379 SLCO5A1Q9H2Y9 848 aa11.86□□□□□ -0.51
UBE4B-206ENST00000466379 GHITMQ9H3K2 345 aa11.86□□□□□ -0.51
UBE4B-206ENST00000466379 LDAHQ9H6V9 325 aa11.86□□□□□ -0.51
UBE4B-206ENST00000466379 SLC7A10Q9NS82 523 aa11.86□□□□□ -0.51
UBE4B-206ENST00000466379 COPZ2Q9P299 210 aa11.86□□□□□ -0.51
UBE4B-206ENST00000466379 MCTS1Q9ULC4 181 aaKnown RBP11.86□□□□□ -0.51
UBE4B-206ENST00000466379 IGKV3D-15A0A087WSY6 115 aa11.85□□□□□ -0.51
UBE4B-206ENST00000466379 HTR5AP47898 357 aa11.85□□□□□ -0.51
UBE4B-206ENST00000466379 QRFPP83859 136 aa11.85□□□□□ -0.51
UBE4B-206ENST00000466379 SLC10A1Q14973 349 aa11.85□□□□□ -0.51
UBE4B-206ENST00000466379 GSG1Q2KHT4 349 aa11.85□□□□□ -0.51
UBE4B-206ENST00000466379 GLIPR1L1Q6UWM5 242 aa11.85□□□□□ -0.51
UBE4B-206ENST00000466379 PGAP1Q75T13 922 aa11.85□□□□□ -0.51
UBE4B-206ENST00000466379 ZNF101Q8IZC7 436 aa11.85□□□□□ -0.51
UBE4B-206ENST00000466379 OR5D18Q8NGL1 313 aa11.85□□□□□ -0.51
UBE4B-206ENST00000466379 OR4C16Q8NGL9 310 aa11.85□□□□□ -0.51
UBE4B-206ENST00000466379 HAS2Q92819 552 aa11.85□□□□□ -0.51
UBE4B-206ENST00000466379 UQCC2Q9BRT2 126 aa11.85□□□□□ -0.51
UBE4B-206ENST00000466379 WNT5BQ9H1J7 359 aa11.85□□□□□ -0.51
UBE4B-206ENST00000466379 FREM1Q5H8C1 2179 aa11.85□□□□□ -0.51
UBE4B-206ENST00000466379 A0A0U1RQV5 110 aa11.85□□□□□ -0.51
UBE4B-206ENST00000466379 C7orf66A4D0T2 115 aa11.85□□□□□ -0.51
UBE4B-206ENST00000466379 TMEM235A6NFC5 223 aa11.85□□□□□ -0.51
UBE4B-206ENST00000466379 NAP1L6A6NFF2 107 aa11.85□□□□□ -0.51
UBE4B-206ENST00000466379 TNFRSF10AO00220 468 aa11.85□□□□□ -0.51
UBE4B-206ENST00000466379 ARPC1BO15143 372 aaKnown RBP11.85□□□□□ -0.51
UBE4B-206ENST00000466379 GTF2F2P13984 249 aa11.85□□□□□ -0.51
UBE4B-206ENST00000466379 PSMB1P20618 241 aaKnown RBP11.85□□□□□ -0.51
UBE4B-206ENST00000466379 VEGFCP49767 419 aa11.85□□□□□ -0.51
UBE4B-206ENST00000466379 SCRN3Q0VDG4 424 aa11.85□□□□□ -0.51
UBE4B-206ENST00000466379 ST3GAL2Q16842 350 aa11.85□□□□□ -0.51
UBE4B-206ENST00000466379 RIPPLY2Q5TAB7 128 aa11.85□□□□□ -0.51
UBE4B-206ENST00000466379 FAM109AQ8N4B1 249 aa11.85□□□□□ -0.51
UBE4B-206ENST00000466379 SGK3Q96BR1 496 aa11.85□□□□□ -0.51
UBE4B-206ENST00000466379 SEH1LQ96EE3 360 aa11.85□□□□□ -0.51
UBE4B-206ENST00000466379 ZNF486Q96H40 463 aaPredicted RBP11.85□□□□□ -0.51
UBE4B-206ENST00000466379 CYYR1Q96J86 154 aa11.85□□□□□ -0.51
UBE4B-206ENST00000466379 OR2H1Q9GZK4 316 aa11.85□□□□□ -0.51
UBE4B-206ENST00000466379 SPRR3Q9UBC9 169 aa11.85□□□□□ -0.51
UBE4B-206ENST00000466379 RAB22AQ9UL26 194 aa11.85□□□□□ -0.51
UBE4B-206ENST00000466379 PIGLQ9Y2B2 252 aa11.85□□□□□ -0.51
UBE4B-206ENST00000466379 MRPS28Q9Y2Q9 187 aaKnown RBP11.85□□□□□ -0.51
UBE4B-206ENST00000466379 V9GYS6 101 aa11.85□□□□□ -0.51
UBE4B-206ENST00000466379 A0A096LPE4 126 aa11.84□□□□□ -0.51
UBE4B-206ENST00000466379 A0A1W2PP11 408 aa11.84□□□□□ -0.51
UBE4B-206ENST00000466379 A0A1W2PPZ6 126 aa11.84□□□□□ -0.51
UBE4B-206ENST00000466379 DHRS3O75911 302 aa11.84□□□□□ -0.51
UBE4B-206ENST00000466379 TPPPO94811 219 aa11.84□□□□□ -0.51
UBE4B-206ENST00000466379 BPNT1O95861 308 aa11.84□□□□□ -0.51
UBE4B-206ENST00000466379 ERCC1P07992 297 aaPredicted RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms