RNA–Protein interactions for RNA: ENST00000466342.1

SQSTM1-206, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 808 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-206ENST00000466342 OR51G2Q8NGK0 314 aa10.12□□□□□ -0.79
SQSTM1-206ENST00000466342 OR5L1Q8NGL2 311 aa10.12□□□□□ -0.79
SQSTM1-206ENST00000466342 SYNPRQ8TBG9 265 aa10.12□□□□□ -0.79
SQSTM1-206ENST00000466342 Q96MT0 163 aa10.12□□□□□ -0.79
SQSTM1-206ENST00000466342 SYT3Q9BQG1 590 aa10.12□□□□□ -0.79
SQSTM1-206ENST00000466342 OR2J1Q9GZK6 312 aa10.12□□□□□ -0.79
SQSTM1-206ENST00000466342 VCX3BQ9H321 246 aa10.12□□□□□ -0.79
SQSTM1-206ENST00000466342 CLN6Q9NWW5 311 aa10.12□□□□□ -0.79
SQSTM1-206ENST00000466342 MYEF2Q9P2K5 600 aaKnown RBP10.12□□□□□ -0.79
SQSTM1-206ENST00000466342 AASSQ9UDR5 926 aa10.12□□□□□ -0.79
SQSTM1-206ENST00000466342 DUSP13Q9UII6 198 aa10.12□□□□□ -0.79
SQSTM1-206ENST00000466342 COPS3Q9UNS2 423 aa10.12□□□□□ -0.79
SQSTM1-206ENST00000466342 STARD10Q9Y365 291 aa10.12□□□□□ -0.79
SQSTM1-206ENST00000466342 KMT2CQ8NEZ4 4911 aaKnown RBP10.11□□□□□ -0.79
SQSTM1-206ENST00000466342 ZNF670-ZNF695F2Z2N8 137 aa10.11□□□□□ -0.79
SQSTM1-206ENST00000466342 PHYHO14832 338 aa10.11□□□□□ -0.79
SQSTM1-206ENST00000466342 ALX3O95076 343 aa10.11□□□□□ -0.79
SQSTM1-206ENST00000466342 CLIC3O95833 236 aa10.11□□□□□ -0.79
SQSTM1-206ENST00000466342 CLPTM1O96005 669 aa10.11□□□□□ -0.79
SQSTM1-206ENST00000466342 IGHV3-13P01766 116 aa10.11□□□□□ -0.79
SQSTM1-206ENST00000466342 APOC1P02654 83 aa10.11□□□□□ -0.79
SQSTM1-206ENST00000466342 LCATP04180 440 aa10.11□□□□□ -0.79
SQSTM1-206ENST00000466342 H2BFMP0C1H6 154 aa10.11□□□□□ -0.79
SQSTM1-206ENST00000466342 OR2T7P0C7T2 308 aa10.11□□□□□ -0.79
SQSTM1-206ENST00000466342 GCH1P30793 250 aa10.11□□□□□ -0.79
SQSTM1-206ENST00000466342 MTNR1AP48039 350 aa10.11□□□□□ -0.79
SQSTM1-206ENST00000466342 SLC6A9P48067 706 aa10.11□□□□□ -0.79
SQSTM1-206ENST00000466342 CX3CR1P49238 355 aa10.11□□□□□ -0.79
SQSTM1-206ENST00000466342 PRKXP51817 358 aa10.11□□□□□ -0.79
SQSTM1-206ENST00000466342 IL5RAQ01344 420 aa10.11□□□□□ -0.79
SQSTM1-206ENST00000466342 LRRN1Q6UXK5 716 aa10.11□□□□□ -0.79
SQSTM1-206ENST00000466342 NAA40Q86UY6 237 aa10.11□□□□□ -0.79
SQSTM1-206ENST00000466342 ZNF283Q8N7M2 679 aa10.11□□□□□ -0.79
SQSTM1-206ENST00000466342 OR2T27Q8NH04 317 aa10.11□□□□□ -0.79
SQSTM1-206ENST00000466342 KLF14Q8TD94 323 aaPredicted RBP10.11□□□□□ -0.79
SQSTM1-206ENST00000466342 APH1BQ8WW43 257 aa10.11□□□□□ -0.79
SQSTM1-206ENST00000466342 ASB17Q8WXJ9 295 aa10.11□□□□□ -0.79
SQSTM1-206ENST00000466342 OR8B4Q96RC9 309 aa10.11□□□□□ -0.79
SQSTM1-206ENST00000466342 POFUT1Q9H488 388 aa10.11□□□□□ -0.79
SQSTM1-206ENST00000466342 GPR160Q9UJ42 338 aa10.11□□□□□ -0.79
SQSTM1-206ENST00000466342 A0A1W2PPW3 197 aa10.1□□□□□ -0.79
SQSTM1-206ENST00000466342 APOL3O95236 402 aa10.1□□□□□ -0.79
SQSTM1-206ENST00000466342 DBTP11182 482 aaKnown RBP10.1□□□□□ -0.79
SQSTM1-206ENST00000466342 ATP6V1E1P36543 226 aa10.1□□□□□ -0.79
SQSTM1-206ENST00000466342 MPV17P39210 176 aa10.1□□□□□ -0.79
SQSTM1-206ENST00000466342 AQP4P55087 323 aa10.1□□□□□ -0.79
SQSTM1-206ENST00000466342 CXCR4P61073 352 aa10.1□□□□□ -0.79
SQSTM1-206ENST00000466342 ISL1P61371 349 aa10.1□□□□□ -0.79
SQSTM1-206ENST00000466342 ROM1Q03395 351 aa10.1□□□□□ -0.79
SQSTM1-206ENST00000466342 ZNF91Q05481 1191 aa10.1□□□□□ -0.79
SQSTM1-206ENST00000466342 RIN1Q13671 783 aa10.1□□□□□ -0.79
SQSTM1-206ENST00000466342 MAD2L1BPQ15013 274 aaPredicted RBP10.1□□□□□ -0.79
SQSTM1-206ENST00000466342 MOGQ16653 247 aa10.1□□□□□ -0.79
SQSTM1-206ENST00000466342 SNAI3Q3KNW1 292 aa10.1□□□□□ -0.79
SQSTM1-206ENST00000466342 TMEM255AQ5JRV8 349 aa10.1□□□□□ -0.79
SQSTM1-206ENST00000466342 DEGS2Q6QHC5 323 aa10.1□□□□□ -0.79
SQSTM1-206ENST00000466342 FBXW12Q6X9E4 464 aa10.1□□□□□ -0.79
SQSTM1-206ENST00000466342 KRT77Q7Z794 578 aa10.1□□□□□ -0.79
SQSTM1-206ENST00000466342 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.1□□□□□ -0.79
SQSTM1-206ENST00000466342 RNFT2Q96EX2 444 aa10.1□□□□□ -0.79
SQSTM1-206ENST00000466342 MROQ9BYG7 248 aa10.1□□□□□ -0.79
SQSTM1-206ENST00000466342 TTTY10Q9BZA0 68 aa10.1□□□□□ -0.79
SQSTM1-206ENST00000466342 TPK1Q9H3S4 243 aa10.1□□□□□ -0.79
SQSTM1-206ENST00000466342 NIPAL2Q9H841 368 aa10.1□□□□□ -0.79
SQSTM1-206ENST00000466342 SLCO1C1Q9NYB5 712 aa10.1□□□□□ -0.79
SQSTM1-206ENST00000466342 PTTG3PQ9NZH4 202 aa10.1□□□□□ -0.79
SQSTM1-206ENST00000466342 TAAR3PQ9P1P4 343 aa10.1□□□□□ -0.79
SQSTM1-206ENST00000466342 LRP12Q9Y561 859 aa10.1□□□□□ -0.79
SQSTM1-206ENST00000466342 HSPE1-MOB4S4R3N1 261 aa10.1□□□□□ -0.79
SQSTM1-206ENST00000466342 TANC2Q9HCD6 1990 aa10.1□□□□□ -0.79
SQSTM1-206ENST00000466342 PRR32B1ATL7 298 aa10.09□□□□□ -0.79
SQSTM1-206ENST00000466342 PSMD9O00233 223 aa10.09□□□□□ -0.79
SQSTM1-206ENST00000466342 ZNF254O75437 659 aa10.09□□□□□ -0.79
SQSTM1-206ENST00000466342 WBP4O75554 376 aaKnown RBP10.09□□□□□ -0.79
SQSTM1-206ENST00000466342 ANXA2P07355 339 aaKnown RBP10.09□□□□□ -0.79
SQSTM1-206ENST00000466342 GNAO1P09471 354 aa10.09□□□□□ -0.79
SQSTM1-206ENST00000466342 SLC2A1P11166 492 aa10.09□□□□□ -0.79
SQSTM1-206ENST00000466342 RAC2P15153 192 aa10.09□□□□□ -0.79
SQSTM1-206ENST00000466342 ALDH3B1P43353 468 aa10.09□□□□□ -0.79
SQSTM1-206ENST00000466342 ZNF121P58317 390 aaPredicted RBP10.09□□□□□ -0.79
SQSTM1-206ENST00000466342 PSMA6P60900 246 aaKnown RBP10.09□□□□□ -0.79
SQSTM1-206ENST00000466342 MRPS11P82912 194 aaKnown RBP10.09□□□□□ -0.79
SQSTM1-206ENST00000466342 EGR3Q06889 387 aa10.09□□□□□ -0.79
SQSTM1-206ENST00000466342 MALLQ13021 153 aa10.09□□□□□ -0.79
SQSTM1-206ENST00000466342 PSG7Q13046 419 aa10.09□□□□□ -0.79
SQSTM1-206ENST00000466342 NKPD1Q17RQ9 610 aa10.09□□□□□ -0.79
SQSTM1-206ENST00000466342 ZNF322Q6U7Q0 402 aaPredicted RBP10.09□□□□□ -0.79
SQSTM1-206ENST00000466342 USP51Q70EK9 711 aa10.09□□□□□ -0.79
SQSTM1-206ENST00000466342 SSX6Q7RTT6 188 aa10.09□□□□□ -0.79
SQSTM1-206ENST00000466342 PRSS45Q7RTY3 260 aa10.09□□□□□ -0.79
SQSTM1-206ENST00000466342 GLCCI1Q86VQ1 547 aa10.09□□□□□ -0.79
SQSTM1-206ENST00000466342 ZNF679Q8IYX0 411 aa10.09□□□□□ -0.79
SQSTM1-206ENST00000466342 C8orf59Q8N0T1 100 aaPredicted RBP10.09□□□□□ -0.79
SQSTM1-206ENST00000466342 OR10H4Q8NGA5 316 aa10.09□□□□□ -0.79
SQSTM1-206ENST00000466342 CNIH3Q8TBE1 160 aa10.09□□□□□ -0.79
SQSTM1-206ENST00000466342 SNX33Q8WV41 574 aa10.09□□□□□ -0.79
SQSTM1-206ENST00000466342 TFAP2CQ92754 450 aa10.09□□□□□ -0.79
SQSTM1-206ENST00000466342 RDH5Q92781 318 aa10.09□□□□□ -0.79
SQSTM1-206ENST00000466342 HAVCR1Q96D42 359 aa10.09□□□□□ -0.79
SQSTM1-206ENST00000466342 TBX5Q99593 518 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms