RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 RTL6Q6ICC9 239 aa16.34■□□□□ 0.21
CAPN3-209ENST00000466222 SEZ6L2Q6UXD5 910 aa16.34■□□□□ 0.21
CAPN3-209ENST00000466222 DNM1P46Q6ZS02 220 aa16.34■□□□□ 0.21
CAPN3-209ENST00000466222 SEM1Q6ZVN7 128 aa16.34■□□□□ 0.21
CAPN3-209ENST00000466222 LRRTM1Q86UE6 522 aa16.34■□□□□ 0.21
CAPN3-209ENST00000466222 CD163Q86VB7 1156 aa16.34■□□□□ 0.21
CAPN3-209ENST00000466222 PIAS4Q8N2W9 510 aaPredicted RBP16.34■□□□□ 0.21
CAPN3-209ENST00000466222 THEM6Q8WUY1 208 aa16.34■□□□□ 0.21
CAPN3-209ENST00000466222 TMEM45BQ96B21 275 aa16.34■□□□□ 0.21
CAPN3-209ENST00000466222 SORCS2Q96PQ0 1159 aa16.34■□□□□ 0.21
CAPN3-209ENST00000466222 ZNF436Q9C0F3 470 aaPredicted RBP16.34■□□□□ 0.21
CAPN3-209ENST00000466222 ZNF175Q9Y473 711 aa16.34■□□□□ 0.21
CAPN3-209ENST00000466222 TRBV5-7A0A0A0MS05 114 aa16.33■□□□□ 0.21
CAPN3-209ENST00000466222 SLC22A5O76082 557 aa16.33■□□□□ 0.21
CAPN3-209ENST00000466222 ALOX5APP20292 161 aa16.33■□□□□ 0.21
CAPN3-209ENST00000466222 C4BPBP20851 252 aa16.33■□□□□ 0.21
CAPN3-209ENST00000466222 AGTR1P30556 359 aa16.33■□□□□ 0.21
CAPN3-209ENST00000466222 MECP2P51608 486 aaKnown RBP16.33■□□□□ 0.21
CAPN3-209ENST00000466222 KRTCAP3Q53RY4 240 aa16.33■□□□□ 0.21
CAPN3-209ENST00000466222 C9orf135Q5VTT2 229 aa16.33■□□□□ 0.21
CAPN3-209ENST00000466222 FRRS1LQ9P0K9 344 aa16.33■□□□□ 0.21
CAPN3-209ENST00000466222 ZNF724A8MTY0 619 aa16.33■□□□□ 0.2
CAPN3-209ENST00000466222 DHHO43323 396 aa16.33■□□□□ 0.2
CAPN3-209ENST00000466222 TSC22D2O75157 780 aa16.33■□□□□ 0.2
CAPN3-209ENST00000466222 RPP14O95059 124 aaKnown RBP16.33■□□□□ 0.2
CAPN3-209ENST00000466222 IL5P05113 134 aa16.33■□□□□ 0.2
CAPN3-209ENST00000466222 BLVRAP53004 296 aa16.33■□□□□ 0.2
CAPN3-209ENST00000466222 FOXF2Q12947 444 aa16.33■□□□□ 0.2
CAPN3-209ENST00000466222 SGCAQ16586 387 aa16.33■□□□□ 0.2
CAPN3-209ENST00000466222 FDX2Q6P4F2 183 aa16.33■□□□□ 0.2
CAPN3-209ENST00000466222 SPICQ8N5J4 248 aa16.33■□□□□ 0.2
CAPN3-209ENST00000466222 OR11H4Q8NGC9 324 aa16.33■□□□□ 0.2
CAPN3-209ENST00000466222 OTOSQ8NHW6 89 aa16.33■□□□□ 0.2
CAPN3-209ENST00000466222 INTS12Q96CB8 462 aaKnown RBP16.33■□□□□ 0.2
CAPN3-209ENST00000466222 CLEC4MQ9H2X3 399 aaPredicted RBP16.33■□□□□ 0.2
CAPN3-209ENST00000466222 GPN1Q9HCN4 374 aaPredicted RBP16.33■□□□□ 0.2
CAPN3-209ENST00000466222 AUP1Q9Y679 476 aa16.33■□□□□ 0.2
CAPN3-209ENST00000466222 OR4C45A6NMZ5 311 aa16.32■□□□□ 0.2
CAPN3-209ENST00000466222 AHRRA9YTQ3 701 aa16.32■□□□□ 0.2
CAPN3-209ENST00000466222 IFNA7P01567 189 aa16.32■□□□□ 0.2
CAPN3-209ENST00000466222 FAUP35544 74 aaKnown RBP16.32■□□□□ 0.2
CAPN3-209ENST00000466222 GPR137CQ8N3F9 429 aa16.32■□□□□ 0.2
CAPN3-209ENST00000466222 ZNF680Q8NEM1 530 aa16.32■□□□□ 0.2
CAPN3-209ENST00000466222 OR2G2Q8NGZ5 317 aa16.32■□□□□ 0.2
CAPN3-209ENST00000466222 GPR148Q8TDV2 347 aa16.32■□□□□ 0.2
CAPN3-209ENST00000466222 PRSS50Q9UI38 385 aa16.32■□□□□ 0.2
CAPN3-209ENST00000466222 IKZF2Q9UKS7 526 aa16.32■□□□□ 0.2
CAPN3-209ENST00000466222 FAM215AQ9Y5M1 114 aa16.32■□□□□ 0.2
CAPN3-209ENST00000466222 ANXA2P2A6NMY6 339 aa16.31■□□□□ 0.2
CAPN3-209ENST00000466222 TTLL8A6PVC2 850 aa16.31■□□□□ 0.2
CAPN3-209ENST00000466222 GMDSO60547 372 aa16.31■□□□□ 0.2
CAPN3-209ENST00000466222 TOXO94900 526 aa16.31■□□□□ 0.2
CAPN3-209ENST00000466222 ANXA2P07355 339 aaKnown RBP16.31■□□□□ 0.2
CAPN3-209ENST00000466222 ZNF823P16415 610 aa16.31■□□□□ 0.2
CAPN3-209ENST00000466222 TAS2R20P59543 309 aa16.31■□□□□ 0.2
CAPN3-209ENST00000466222 CEACAM16Q2WEN9 425 aa16.31■□□□□ 0.2
CAPN3-209ENST00000466222 C10orf128Q5T292 105 aa16.31■□□□□ 0.2
CAPN3-209ENST00000466222 SFRP4Q6FHJ7 346 aaPredicted RBP16.31■□□□□ 0.2
CAPN3-209ENST00000466222 LRRC18Q8N456 261 aa16.31■□□□□ 0.2
CAPN3-209ENST00000466222 ASB17Q8WXJ9 295 aa16.31■□□□□ 0.2
CAPN3-209ENST00000466222 CITED4Q96RK1 184 aa16.31■□□□□ 0.2
CAPN3-209ENST00000466222 HEXA-AS1Q9H8Q6 139 aa16.31■□□□□ 0.2
CAPN3-209ENST00000466222 NPDC1Q9NQX5 325 aaPredicted RBP16.31■□□□□ 0.2
CAPN3-209ENST00000466222 TAS2R8Q9NYW2 309 aa16.31■□□□□ 0.2
CAPN3-209ENST00000466222 SPTA1P02549 2419 aa16.31■□□□□ 0.2
CAPN3-209ENST00000466222 KIAA1549Q9HCM3 1950 aa16.31■□□□□ 0.2
CAPN3-209ENST00000466222 SNRPGP15A8MWD9 76 aa16.31■□□□□ 0.2
CAPN3-209ENST00000466222 CDK2P24941 298 aa16.31■□□□□ 0.2
CAPN3-209ENST00000466222 ZNF133P52736 654 aaPredicted RBP16.31■□□□□ 0.2
CAPN3-209ENST00000466222 KLRB1Q12918 225 aa16.31■□□□□ 0.2
CAPN3-209ENST00000466222 EIF2B1Q14232 305 aaKnown RBP16.31■□□□□ 0.2
CAPN3-209ENST00000466222 GLDNQ6ZMI3 551 aaPredicted RBP16.31■□□□□ 0.2
CAPN3-209ENST00000466222 DCXRQ7Z4W1 244 aa16.31■□□□□ 0.2
CAPN3-209ENST00000466222 ZNF676Q8N7Q3 588 aa16.31■□□□□ 0.2
CAPN3-209ENST00000466222 NABP1Q96AH0 204 aa16.31■□□□□ 0.2
CAPN3-209ENST00000466222 ORAI1Q96D31 301 aa16.31■□□□□ 0.2
CAPN3-209ENST00000466222 ABHD6Q9BV23 337 aa16.31■□□□□ 0.2
CAPN3-209ENST00000466222 SLCO5A1Q9H2Y9 848 aa16.31■□□□□ 0.2
CAPN3-209ENST00000466222 GPR35Q9HC97 309 aa16.31■□□□□ 0.2
CAPN3-209ENST00000466222 STEAP1Q9UHE8 339 aa16.31■□□□□ 0.2
CAPN3-209ENST00000466222 HPXP02790 462 aa16.3■□□□□ 0.2
CAPN3-209ENST00000466222 FCGR2AP12318 317 aa16.3■□□□□ 0.2
CAPN3-209ENST00000466222 ABOP16442 354 aa16.3■□□□□ 0.2
CAPN3-209ENST00000466222 ADRA2CP18825 462 aa16.3■□□□□ 0.2
CAPN3-209ENST00000466222 ZP1P60852 638 aa16.3■□□□□ 0.2
CAPN3-209ENST00000466222 NSUN5P2Q63ZY6 315 aa16.3■□□□□ 0.2
CAPN3-209ENST00000466222 GFRALQ6UXV0 394 aa16.3■□□□□ 0.2
CAPN3-209ENST00000466222 BEST4Q8NFU0 473 aa16.3■□□□□ 0.2
CAPN3-209ENST00000466222 APH1AQ96BI3 265 aa16.3■□□□□ 0.2
CAPN3-209ENST00000466222 GMPPAQ96IJ6 420 aaPredicted RBP16.3■□□□□ 0.2
CAPN3-209ENST00000466222 NOX3Q9HBY0 568 aa16.3■□□□□ 0.2
CAPN3-209ENST00000466222 PARPBPQ9NWS1 579 aa16.3■□□□□ 0.2
CAPN3-209ENST00000466222 NKIRAS2Q9NYR9 191 aa16.3■□□□□ 0.2
CAPN3-209ENST00000466222 ASH2LQ9UBL3 628 aa16.3■□□□□ 0.2
CAPN3-209ENST00000466222 CYB5R1Q9UHQ9 305 aa16.3■□□□□ 0.2
CAPN3-209ENST00000466222 TINAGQ9UJW2 476 aa16.3■□□□□ 0.2
CAPN3-209ENST00000466222 LHFPL6Q9Y693 200 aa16.3■□□□□ 0.2
CAPN3-209ENST00000466222 LEUTXA8MZ59 168 aa16.29■□□□□ 0.2
CAPN3-209ENST00000466222 XRCC3O43542 346 aa16.29■□□□□ 0.2
CAPN3-209ENST00000466222 SS18L1O75177 396 aaPredicted RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms